Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0004077 Lotus japonicus HOM05D000003 ORTHO05D000022 1.2e-85 319.7 149 100.0
Lj6g0023576 Lotus japonicus HOM05D000003 ORTHO05D000022 1.4e-33 146.7 99 65.7
LjContig00357g0004525 Lotus japonicus HOM05D000003 ORTHO05D000022 2.2e-23 112.8 69 71.0
Lj3g0003007 Lotus japonicus HOM05D000003 ORTHO05D000022 1.7e-15 86.7 95 43.2
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-09 65.1 91 33.0
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-08 63.2 94 34.0
Atru.chr3.2099 Acer truncatum HOM05D000003 ORTHO05D000022 4.5e-08 62.0 94 34.0
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 4.5e-08 62.0 92 38.0
Atru.chr6.2380 Acer truncatum HOM05D000003 ORTHO05D000022 5.8e-08 61.6 92 33.7
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 5.8e-08 61.6 94 35.1
Atru.chr4.2836 Acer truncatum HOM05D000003 ORTHO05D000022 7.6e-08 61.2 89 32.6
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 7.6e-08 61.2 98 37.8
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 9.9e-08 60.8 94 34.0
FvH4_7g26563 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-07 60.5 101 34.7
RcHm_v2.0_Chr7g0181271 Rosa chinensis HOM05D000003 ORTHO05D000022 1.7e-07 60.1 95 36.8
Atru.chr12.2455 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-07 59.3 98 30.6
Atru.chr3.2200 Acer truncatum HOM05D000003 ORTHO05D000022 3.8e-07 58.9 94 33.0
VMungo0540G1625 Vigna mungo HOM05D000062 ORTHO05D000043 3.8e-07 58.9 111 34.2
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 4.9e-07 58.5 63 41.3
Phvul.006G170300 Phaseolus vulgaris HOM05D000062 ORTHO05D000043 6.4e-07 58.2 111 35.1
Atru.chr1.3262 Acer truncatum HOM05D000003 ORTHO05D000022 8.4e-07 57.8 90 32.2
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 8.4e-07 57.8 92 34.8
Atru.chr3.867 Acer truncatum HOM05D000003 ORTHO05D000022 8.4e-07 57.8 88 34.1
FvH4_2g15861 Fragaria vesca HOM05D000003 ORTHO05D000022 8.4e-07 57.8 98 35.7
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-06 57.4 97 33.0
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-06 57.4 96 31.2
FvH4_2g00771 Fragaria vesca HOM05D000003 ORTHO05D000022 1.1e-06 57.4 100 34.0
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 57.0 94 31.9
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 57.0 94 31.9
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 3.2e-06 55.8 102 33.3
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-06 55.1 88 29.5
Atru.chr2.1762 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-06 55.1 63 41.3
Atru.chr5.1996 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-06 55.1 97 30.9
Atru.chr8.699 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-06 55.1 88 30.7
Atru.chr11.90 Acer truncatum HOM05D000003 ORTHO05D000022 7.1e-06 54.7 79 34.2
Atru.chr3.3019 Acer truncatum HOM05D000003 ORTHO05D000022 9.3e-06 54.3 89 33.7
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 9.3e-06 54.3 62 38.7
Atru.chr8.1057 Acer truncatum HOM05D000003 ORTHO05D000022 9.3e-06 54.3 63 39.7


User provided reference genes

Program Settings