Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0004067 Lotus japonicus HOM05D006905 ORTHO05D003398 1.9e-130 469.2 234 100.0
Medtr1g081280 Medicago truncatula HOM05D006905 ORTHO05D003398 5.3e-64 248.4 197 68.5
Lalb_Chr06g0167991 Lupinus albus HOM05D006905 ORTHO05D003398 3.3e-58 229.2 175 69.1
arahy.Tifrunner.gnm1.ann1.PI1FXK Arachis hypogaea HOM05D006905 ORTHO05D003398 4.8e-57 225.3 180 67.8
Glyma.10G160600 Glycine max HOM05D006905 ORTHO05D003398 2.4e-56 223.0 180 68.3
TPR.G11158 Trifolium pratense HOM05D006905 ORTHO05D003398 2.2e-54 216.5 179 67.6
Phvul.007G186100 Phaseolus vulgaris HOM05D006905 ORTHO05D003398 7.2e-53 211.5 180 67.2
VMungo0720G0828 Vigna mungo HOM05D006905 ORTHO05D003398 6.7e-51 204.9 181 65.7
arahy.Tifrunner.gnm1.ann1.N7GLTS Arachis hypogaea HOM05D006905 ORTHO05D003398 3.4e-47 192.6 165 66.1
MD04G1220800 Malus domestica HOM05D006905 ORTHO05D003398 6.1e-44 181.8 140 63.6
Cfa006463 Carpinus fangiana HOM05D006905 ORTHO05D003398 3.3e-42 176.0 150 60.0
COL.COLO4_38037 Corchorus olitorius HOM05D006905 ORTHO05D003398 3.3e-42 176.0 151 58.3
Prupe.6G339800 Prunus persica HOM05D006905 ORTHO05D003398 3.3e-42 176.0 158 57.6
CANSAT54G0047 Cannabis sativa HOM05D006905 ORTHO05D003398 7.4e-42 174.9 133 66.2
Migut.N01907 Erythranthe guttata HOM05D006905 ORTHO05D003398 2.8e-41 172.9 154 58.4
Glyma.20G227801 Glycine max HOM05D006905 ORTHO05D003398 2.8e-41 172.9 122 76.2
Nn4g26306 Nelumbo nucifera HOM05D006905 ORTHO05D003398 2.8e-41 172.9 159 56.6
Dinv11554 Davidia involucrata HOM05D006905 ORTHO05D003398 3.7e-41 172.6 147 62.6
Nitab4.5_0013433g0040 Nicotiana tabacum HOM05D006905 ORTHO05D003398 3.7e-41 172.6 154 61.0
RcHm_v2.0_Chr3g0451941 Rosa chinensis HOM05D006905 ORTHO05D003398 3.7e-41 172.6 182 52.7
Thecc.05G193600 Theobroma cacao HOM05D006905 ORTHO05D003398 4.8e-41 172.2 151 58.3
Nitab4.5_0002361g0060 Nicotiana tabacum HOM05D006905 ORTHO05D003398 6.3e-41 171.8 154 59.7
Aqoxy5G00478 Aquilegia oxysepala HOM05D006905 ORTHO05D003398 8.2e-41 171.4 150 58.7
Manes.09G156000 Manihot esculenta HOM05D006905 ORTHO05D003398 8.2e-41 171.4 151 60.9
CAN.G134.166 Capsicum annuum HOM05D006905 ORTHO05D003398 1.1e-40 171.0 151 60.9
PGR083G0691 Punica granatum HOM05D006905 ORTHO05D003398 1.4e-40 170.6 151 57.6
PGSC0003DMG400022508 Solanum tuberosum HOM05D006905 ORTHO05D003398 1.4e-40 170.6 152 60.5
Duzib128G0775 Durio zibethinus HOM05D006905 ORTHO05D003398 1.8e-40 170.2 151 58.3
Peaxi162Scf00404g00025 Petunia axillaris HOM05D006905 ORTHO05D003398 1.8e-40 170.2 152 59.9
CSS0017923 Camellia sinensis var. sinensis HOM05D006905 ORTHO05D003398 2.4e-40 169.9 165 55.8
MBI04_g20814_MAGBIO Magnolia biondii HOM05D006905 ORTHO05D003398 2.4e-40 169.9 181 51.9
QL03p024500 Quercus lobata HOM05D006905 ORTHO05D003398 3.1e-40 169.5 150 57.3
SGA_v2.0_scaffold5G02928 Striga asiatica HOM05D006905 ORTHO05D003398 3.1e-40 169.5 164 56.7
FvH4_6g03440 Fragaria vesca HOM05D006905 ORTHO05D003398 4.1e-40 169.1 165 53.3
Gohir.D08G246700 Gossypium hirsutum HOM05D006905 ORTHO05D003398 5.3e-40 168.7 151 56.3
Gorai.004G263200 Gossypium raimondii HOM05D006905 ORTHO05D003398 5.3e-40 168.7 151 56.3
Potri.013G036500 Populus trichocarpa HOM05D006905 ORTHO05D003398 9.1e-40 167.9 151 58.3
PGR083G1281 Punica granatum HOM05D006905 ORTHO05D003398 1.2e-39 167.5 151 57.0
Solyc01g097820.4 Solanum lycopersicum HOM05D006905 ORTHO05D003398 1.2e-39 167.5 152 59.9
FAN05G2111 Fragaria x ananassa HOM05D006905 ORTHO05D003398 2.0e-39 166.8 165 52.7
GSVIVG01021847001 Vitis vinifera HOM05D006905 ORTHO05D003398 2.0e-39 166.8 175 54.9
EL10Ac4g09180 Beta vulgaris HOM05D006905 ORTHO05D003398 3.4e-39 166.0 151 57.0
Sopen01g041420 Solanum pennellii HOM05D006905 ORTHO05D003398 3.4e-39 166.0 152 59.2
CiPaw.07G006400 Carya illinoinensis HOM05D006905 ORTHO05D003398 5.9e-39 165.2 151 58.9
FAN14G2439 Fragaria x ananassa HOM05D006905 ORTHO05D003398 5.9e-39 165.2 165 52.1
TAR636G1711 Trochodendron aralioides HOM05D006905 ORTHO05D003398 1.7e-38 163.7 133 62.4
Ciclev10002392m.g Citrus clementina HOM05D006905 ORTHO05D003398 2.9e-38 162.9 161 55.9
Sed0006348 Sechium edule HOM05D006905 ORTHO05D003398 3.8e-38 162.5 169 54.4
vmacro05070 Vaccinium macrocarpon HOM05D006905 ORTHO05D003398 5.0e-38 162.2 128 62.5
FAN09G1595 Fragaria x ananassa HOM05D006905 ORTHO05D003398 6.5e-38 161.8 165 52.7
Atru.chr2.731 Acer truncatum HOM05D006905 ORTHO05D003398 1.9e-37 160.2 130 63.1
CsaV3_2G004310 Cucumis sativus L. HOM05D006905 ORTHO05D003398 2.5e-37 159.8 166 54.2
Cpa.g.sc117.65 Carica papaya HOM05D006905 ORTHO05D003398 4.2e-37 159.1 129 61.2
HanXRQChr12g0384101 Helianthus annuus HOM05D006905 ORTHO05D003398 4.2e-37 159.1 129 62.8
FAN02G2898 Fragaria x ananassa HOM05D006905 ORTHO05D003398 5.5e-37 158.7 165 51.5
Lsat_1_v5_gn_3_28040 Lactuca sativa HOM05D006905 ORTHO05D003398 5.5e-37 158.7 132 56.8
Haze_04329 Corylus avellana HOM05D006905 ORTHO05D003398 7.2e-37 158.3 136 63.2
TWI56G1496 Tripterygium wilfordii HOM05D006905 ORTHO05D003398 7.2e-37 158.3 131 61.8
Atru.chr2.743 Acer truncatum HOM05D006905 ORTHO05D003398 9.4e-37 157.9 130 62.3
ATR0737G167 Amborella trichopoda HOM05D006905 ORTHO05D003398 9.4e-37 157.9 132 63.6
Eucgr.L02187 Eucalyptus grandis HOM05D006905 ORTHO05D003398 1.5e-34 150.6 139 57.6
Eucgr.B01715 Eucalyptus grandis HOM05D006905 ORTHO05D003398 2.0e-34 150.2 143 57.3
ECA246G1419 Erigeron canadensis HOM05D006905 ORTHO05D003398 4.4e-34 149.1 129 58.1
AL3G15180 Arabidopsis lyrata HOM05D006905 ORTHO05D003398 6.3e-33 145.2 131 53.4
Sc20g0000270 Simmondsia chinensis HOM05D006905 ORTHO05D003398 1.1e-32 144.4 128 56.2
Carub.0003s0409 Capsella rubella HOM05D006905 ORTHO05D003398 1.4e-32 144.1 140 52.1
Sp3g03710 Schrenkiella parvula HOM05D006905 ORTHO05D003398 1.4e-32 144.1 138 54.3
THA.LOC104802823 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 1.4e-32 144.1 133 53.4
Aa31LG5G15280 Aethionema arabicum HOM05D006905 ORTHO05D003398 1.8e-32 143.7 151 49.7
Actinidia30925 Actinidia chinensis HOM05D006905 ORTHO05D003398 5.3e-32 142.1 153 51.6
MELO3C004363.2 Cucumis melo HOM05D006905 ORTHO05D003398 9.1e-32 141.4 150 54.7
AT3G04890 Arabidopsis thaliana HOM05D006905 ORTHO05D003398 1.2e-31 141.0 137 51.8
Thhalv10021425m.g Eutrema salsugineum HOM05D006905 ORTHO05D003398 2.0e-31 140.2 137 54.0
THA.LOC104802824 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 5.9e-31 138.7 143 50.3
A05p42710 Brassica napus HOM05D006905 ORTHO05D003398 1.0e-30 137.9 132 53.8
Rhsim07G0175500 Rhododendron simsii HOM05D006905 ORTHO05D003398 1.0e-30 137.9 110 64.5
BolC5t34896H Brassica oleracea HOM05D006905 ORTHO05D003398 1.3e-30 137.5 146 50.7
CARHR079160 Cardamine hirsuta HOM05D006905 ORTHO05D003398 3.8e-30 136.0 130 51.5
BcaNung06537 Brassica carinata HOM05D006905 ORTHO05D003398 8.5e-30 134.8 148 49.3
C05p62430 Brassica napus HOM05D006905 ORTHO05D003398 8.5e-30 134.8 148 49.3
unitig_8.g4913 Utricularia gibba HOM05D006905 ORTHO05D003398 9.4e-29 131.3 130 52.3
Psat6g147000 Pisum sativum HOM05D002360 ORTHO05D006297 1.2e-28 131.0 85 78.8
SalBow8G0693 Salvia bowleyana HOM05D006905 ORTHO05D003398 1.2e-28 131.0 96 61.5
SEGI_10814 Sequoiadendron giganteum HOM05D006905 ORTHO05D003398 1.2e-28 131.0 132 47.0
BraA05t22982Z Brassica rapa HOM05D006905 ORTHO05D003398 2.1e-28 130.2 140 50.7
Mapoly0006s0024 Marchantia polymorpha HOM05D006905 ORTHO05D003398 4.7e-28 129.0 162 42.6
FAN05G4190 Fragaria x ananassa HOM05D006905 ORTHO05D003398 7.5e-26 121.7 165 44.2
Pp3c24_12540 Physcomitrium patens HOM05D006905 ORTHO05D003398 4.1e-24 115.9 141 47.5
AagrBONN_evm.TU.Sc2ySwM_117.1949 Anthoceros agrestis HOM05D006905 ORTHO05D003398 3.5e-23 112.8 127 44.1
Sabra13G0035600 Salix brachista HOM05D006905 ORTHO05D003398 2.2e-22 110.2 150 46.7
Hund22112 Selenicereus undatus HOM05D006905 ORTHO05D003398 2.2e-22 110.2 155 44.5
AUR62000979 Chenopodium quinoa HOM05D006905 ORTHO05D003398 3.8e-22 109.4 129 46.5
Gohir.A08G226300 Gossypium hirsutum HOM05D006905 ORTHO05D003398 1.5e-21 107.5 108 52.8
BcaC05g30566 Brassica carinata HOM05D006905 ORTHO05D003398 2.5e-21 106.7 79 62.0
Mapoly0178s0027 Marchantia polymorpha HOM05D006905 ORTHO05D003398 3.2e-21 106.3 83 54.2
Mapoly0016s0115 Marchantia polymorpha HOM05D006905 ORTHO05D003398 5.5e-21 105.5 82 54.9
Mapoly0059s0020 Marchantia polymorpha HOM05D006905 ORTHO05D003398 4.7e-20 102.4 82 53.7
Cc02_g31660 Coffea canephora HOM05D006905 ORTHO05D003398 4.1e-16 89.4 90 48.9
ClCG02G016440 Citrullus lanatus HOM05D006905 ORTHO05D003398 7.2e-13 78.6 167 37.1
Potri.013G037050 Populus trichocarpa HOM05D006905 ORTHO05D003398 3.6e-12 76.3 98 45.9
Cre10.g464250 Chlamydomonas reinhardtii HOM05D006905 ORTHO05D003398 6.8e-11 72.0 124 35.5
Aqoxy7G00302 Aquilegia oxysepala HOM05D007525 ORTHO05D003398 1.7e-09 67.4 165 29.7
Actinidia10060 Actinidia chinensis HOM05D007525 ORTHO05D003398 6.3e-09 65.5 161 29.8
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.8e-08 63.9 159 27.0
Gohir.A01G104050 Gossypium hirsutum HOM05D006905 ORTHO05D003398 1.8e-08 63.9 86 43.0
Mapoly0153s0018 Marchantia polymorpha HOM05D007525 ORTHO05D003398 3.1e-08 63.2 160 26.2
FvH4_7g15085 Fragaria vesca HOM05D007525 ORTHO05D003398 4.1e-08 62.8 155 28.4
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.4e-08 62.4 155 28.4
PGR042G3120 Punica granatum HOM05D007525 ORTHO05D003398 5.4e-08 62.4 143 30.1
RcHm_v2.0_Chr1g0357281 Rosa chinensis HOM05D007525 ORTHO05D003398 5.4e-08 62.4 165 26.1
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 9.2e-08 61.6 155 28.4
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 9.2e-08 61.6 155 28.4
Nn1g01647 Nelumbo nucifera HOM05D007525 ORTHO05D003398 1.2e-07 61.2 168 27.4
TAR636G1192 Trochodendron aralioides HOM05D007525 ORTHO05D003398 1.2e-07 61.2 158 29.7
Cfa003884 Carpinus fangiana HOM05D007525 ORTHO05D003398 2.0e-07 60.5 155 31.0
AUR62022606 Chenopodium quinoa HOM05D007525 ORTHO05D003398 2.0e-07 60.5 154 29.2
MSTRG.4841 Avicennia marina HOM05D007525 ORTHO05D003398 2.7e-07 60.1 169 24.9
Eucgr.E00102 Eucalyptus grandis HOM05D007525 ORTHO05D003398 2.7e-07 60.1 131 31.3
AagrBONN_evm.TU.Sc2ySwM_228.1193 Anthoceros agrestis HOM05D007525 ORTHO05D003398 3.5e-07 59.7 146 26.7
Potri.002G162800 Populus trichocarpa HOM05D007525 ORTHO05D003398 4.5e-07 59.3 151 29.8
Rhsim07G0011500 Rhododendron simsii HOM05D001943 ORTHO05D001969 4.5e-07 59.3 155 27.7
SMO146G0019 Selaginella moellendorffii HOM05D006905 ORTHO05D003398 4.5e-07 59.3 87 39.1
PSO478G5123 Papaver somniferum HOM05D007525 ORTHO05D003398 5.9e-07 58.9 156 28.8
Manes.05G030450 Manihot esculenta HOM05D007525 ORTHO05D003398 7.8e-07 58.5 148 27.7
Thecc.01G354100 Theobroma cacao HOM05D007525 ORTHO05D003398 7.8e-07 58.5 140 29.3
HPP92_021017 Vanilla planifolia HOM05D007525 ORTHO05D003398 7.8e-07 58.5 148 27.0
Ah.06g192600 Amaranthus hybridus HOM05D002360 ORTHO05D003398 1.0e-06 58.2 70 45.7
CAN.G78.117 Capsicum annuum HOM05D007525 ORTHO05D003398 1.0e-06 58.2 89 32.6
Ciclev10022006m.g Citrus clementina HOM05D007525 ORTHO05D003398 1.0e-06 58.2 181 26.5
CBR_g31994 Chara braunii HOM05D007525 ORTHO05D003398 1.3e-06 57.8 142 24.6
MELO3C021185.2 Cucumis melo HOM05D007525 ORTHO05D003398 1.3e-06 57.8 151 28.5
EL10Ac1g00368 Beta vulgaris HOM05D007525 ORTHO05D003398 1.7e-06 57.4 173 27.7
CANSAT56G0175 Cannabis sativa HOM05D007525 ORTHO05D003398 1.7e-06 57.4 171 26.9
Thhalv10001607m.g Eutrema salsugineum HOM05D007525 ORTHO05D003398 1.7e-06 57.4 80 33.8
Prupe.2G175600 Prunus persica HOM05D007525 ORTHO05D003398 1.7e-06 57.4 152 27.0
SMO358G0422 Selaginella moellendorffii HOM05D007525 ORTHO05D003398 1.7e-06 57.4 103 29.1
Carub.0004s2880 Capsella rubella HOM05D007525 ORTHO05D003398 2.9e-06 56.6 80 33.8
Peaxi162Scf00020g00126 Petunia axillaris HOM05D007525 ORTHO05D003398 2.9e-06 56.6 114 28.9
SalBow5G0215 Salvia bowleyana HOM05D007525 ORTHO05D003398 2.9e-06 56.6 175 25.7
Duzib133G0712 Durio zibethinus HOM05D007525 ORTHO05D003398 3.8e-06 56.2 84 33.3
Psat4g157560 Pisum sativum HOM05D007525 ORTHO05D003398 3.8e-06 56.2 104 29.8
Sopen01g038780 Solanum pennellii HOM05D007525 ORTHO05D003398 3.8e-06 56.2 116 31.0
TWI59G1390 Tripterygium wilfordii HOM05D007525 ORTHO05D003398 3.8e-06 56.2 164 29.9
Aa31LG1G27510 Aethionema arabicum HOM05D005821 ORTHO05D006649 5.0e-06 55.8 163 28.8
MBI04_g26962_MAGBIO Magnolia biondii HOM05D007525 ORTHO05D003398 5.0e-06 55.8 139 30.2
Sabra02G0147700 Salix brachista HOM05D007525 ORTHO05D003398 5.0e-06 55.8 148 26.4
GSVIVG01026980001 Vitis vinifera HOM05D007525 ORTHO05D003398 5.0e-06 55.8 159 27.0
CSS0031135 Camellia sinensis var. sinensis HOM05D007525 ORTHO05D003398 6.6e-06 55.5 150 28.0
Cpa.g.sc184.25 Carica papaya HOM05D007525 ORTHO05D003398 6.6e-06 55.5 155 27.1
CsaV3_6G000860 Cucumis sativus L. HOM05D007525 ORTHO05D003398 6.6e-06 55.5 170 27.6
Gohir.D07G146200 Gossypium hirsutum HOM05D007525 ORTHO05D003398 6.6e-06 55.5 132 30.3
Solyc01g095000.3 Solanum lycopersicum HOM05D007525 ORTHO05D003398 6.6e-06 55.5 116 30.2
vmacro13241 Vaccinium macrocarpon HOM05D007525 ORTHO05D003398 6.6e-06 55.5 84 32.1
ATR0661G217 Amborella trichopoda HOM05D007525 ORTHO05D003398 8.6e-06 55.1 112 27.7
Gorai.001G158400 Gossypium raimondii HOM05D007525 ORTHO05D003398 8.6e-06 55.1 132 29.5
PGSC0003DMG400000187 Solanum tuberosum HOM05D007525 ORTHO05D003398 8.6e-06 55.1 116 31.0


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