Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0003869 Lotus japonicus HOM05D003035 ORTHO05D006294 1.1e-228 796.2 376 100.0
Lj4g0012844 Lotus japonicus HOM05D003035 ORTHO05D006294 2.1e-94 350.1 344 56.4
Lj6g0023511 Lotus japonicus HOM05D003035 ORTHO05D006294 2.5e-87 326.6 338 51.5
Lj6g0012545 Lotus japonicus HOM05D003035 ORTHO05D006294 7.9e-86 321.6 292 57.5
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 1.5e-84 317.4 354 48.9
TPR.G18028 Trifolium pratense HOM05D003035 ORTHO05D000440 1.1e-71 274.6 363 43.5
TPR.G35510 Trifolium pratense HOM05D003035 ORTHO05D000440 2.5e-71 273.5 346 46.0
TPR.G16157 Trifolium pratense HOM05D003035 ORTHO05D000440 9.4e-71 271.6 389 45.2
Medtr2g020100 Medicago truncatula HOM05D003035 ORTHO05D000440 1.6e-70 270.8 343 43.4
TPR.G30670 Trifolium pratense HOM05D003035 ORTHO05D000440 1.4e-69 267.7 366 43.2
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 1.1e-68 264.6 368 44.0
Lj6g0012480 Lotus japonicus HOM05D003035 ORTHO05D006294 5.3e-66 255.8 264 51.1
TPR.G1525 Trifolium pratense HOM05D003035 ORTHO05D000440 2.0e-65 253.8 356 40.7
Lj6g0004158 Lotus japonicus HOM05D003035 ORTHO05D006294 2.2e-56 223.8 318 42.1
Lj6g0012948 Lotus japonicus HOM05D003035 ORTHO05D006294 9.7e-52 208.4 316 40.5
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 6.3e-43 179.1 384 33.9
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 5.4e-42 176.0 387 33.9
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 2.7e-41 173.7 374 34.0
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 2.2e-40 170.6 385 33.5
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 2.9e-40 170.2 341 35.2
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 2.9e-40 170.2 373 33.2
TPR.G35523 Trifolium pratense HOM05D003035 ORTHO05D000440 1.0e-37 161.8 200 46.5
TPR.G13451 Trifolium pratense HOM05D003035 ORTHO05D000440 4.0e-37 159.8 258 41.5
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 1.3e-32 144.8 360 30.8
Thecc.07G034800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.3e-32 144.8 353 28.0
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 8.0e-30 135.6 355 31.3
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 3.0e-29 133.7 378 28.6
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 3.4e-28 130.2 382 29.3
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.9e-27 127.1 355 26.5
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 3.7e-27 126.7 345 28.4
TWI38G2071 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 7.0e-26 122.5 383 30.5
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 3.0e-24 117.1 357 31.4
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.3e-23 113.6 327 26.3
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 2.1e-22 110.9 327 26.0
QL08p002650 Quercus lobata HOM05D003035 ORTHO05D000440 2.3e-21 107.5 331 28.7
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 3.1e-21 107.1 374 26.5
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 8.9e-21 105.5 311 26.7
PSO339G4508 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-20 104.8 373 26.0
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 1.5e-20 104.8 336 25.0
Thecc.07G037500 Theobroma cacao HOM05D003035 ORTHO05D006294 1.5e-20 104.8 247 27.9
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 2.9e-19 100.5 398 26.6
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 1.4e-18 98.2 348 25.3
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 9.2e-18 95.5 336 25.3
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-17 95.1 406 26.4
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 6.0e-17 92.8 335 22.4
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 2.3e-16 90.9 378 24.9
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.3e-16 90.9 336 25.6
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.0e-16 90.5 338 27.2
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 6.6e-16 89.4 392 26.5
PSO170G3556 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-15 88.6 409 24.7
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-15 88.6 368 27.7
Lalb_Chr23g0273461 Lupinus albus HOM05D003035 ORTHO05D000440 3.3e-15 87.0 319 28.2
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 3.3e-15 87.0 288 22.9
QL08p010303 Quercus lobata HOM05D003035 ORTHO05D006294 4.3e-15 86.7 193 31.1
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-14 84.7 417 25.2
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.6e-14 84.7 333 24.9
ECA248G3255 Erigeron canadensis HOM05D008265 ORTHO05D000440 2.8e-14 84.0 324 27.2
TPR.G9947 Trifolium pratense HOM05D003035 ORTHO05D000440 3.6e-14 83.6 163 35.0
EL10As4g23465 Beta vulgaris HOM05D003035 ORTHO05D000440 6.2e-14 82.8 343 23.6
TWI38G0420 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 1.8e-13 81.3 241 29.9
PSO675G8679 Papaver somniferum HOM05D003035 ORTHO05D000440 3.1e-13 80.5 323 25.1
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 6.8e-13 79.3 375 23.7
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 8.9e-13 79.0 337 23.4
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 8.9e-13 79.0 376 23.1
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 8.9e-13 79.0 315 24.8
PSO339G0474 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-12 78.6 378 24.1
Thecc.07G034700 Theobroma cacao HOM05D003035 ORTHO05D006294 1.2e-12 78.6 298 25.5
HanXRQChr01g0025311 Helianthus annuus HOM05D008265 ORTHO05D000440 2.6e-12 77.4 291 26.5
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.6e-12 77.4 315 22.9
ECA247G0747 Erigeron canadensis HOM05D008265 ORTHO05D000440 5.8e-12 76.3 301 25.2
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 9.8e-12 75.5 316 22.5
PSO732G0047 Papaver somniferum HOM05D003035 ORTHO05D000440 1.7e-11 74.7 368 22.6
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 2.9e-11 73.9 333 23.1
HanXRQChr01g0025341 Helianthus annuus HOM05D008265 ORTHO05D000440 4.9e-11 73.2 324 25.3
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.1e-10 72.0 294 22.1
PSO478G3996 Papaver somniferum HOM05D003035 ORTHO05D006294 1.1e-10 72.0 384 22.4
PSO541G0577 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-10 72.0 120 33.3
TAR374G0203 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.9e-10 71.2 347 24.2
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 2.4e-10 70.9 318 22.0
PSO210G4420 Papaver somniferum HOM05D003035 ORTHO05D000440 9.2e-10 68.9 344 25.3
Os09g0384900 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D006294 1.6e-09 68.2 280 23.2
Duzib213G0702 Durio zibethinus HOM05D003035 ORTHO05D000440 2.1e-09 67.8 92 35.9
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.1e-09 67.8 113 29.2
PSO170G5576 Papaver somniferum HOM05D003035 ORTHO05D000440 3.5e-09 67.0 132 31.1
PSO339G5805 Papaver somniferum HOM05D003035 ORTHO05D000440 6.0e-09 66.2 114 28.1
PSO210G4257 Papaver somniferum HOM05D003035 ORTHO05D000440 2.3e-08 64.3 122 29.5
PSO339G5542 Papaver somniferum HOM05D003035 ORTHO05D000440 2.3e-08 64.3 269 24.2
PSO782G4624 Papaver somniferum HOM05D003035 ORTHO05D000440 3.9e-08 63.5 164 27.4
PSO302G0092 Papaver somniferum HOM05D003035 ORTHO05D000440 5.1e-08 63.2 222 26.1
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 8.6e-08 62.4 283 21.2
TAR374G1264 Trochodendron aralioides HOM05D001286 ORTHO05D000440 8.6e-08 62.4 275 25.8
PSO210G3783 Papaver somniferum HOM05D003035 ORTHO05D006294 1.5e-07 61.6 132 28.8
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 1.5e-07 61.6 113 31.9
PSO210G1373 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-07 60.8 132 28.0
PSO339G4296 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-07 60.8 217 26.3
Rhsim08G0204600 Rhododendron simsii HOM05D001286 ORTHO05D000440 4.3e-07 60.1 297 24.2
Thecc.05G212700 Theobroma cacao HOM05D001286 ORTHO05D000440 5.6e-07 59.7 277 25.6
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 7.3e-07 59.3 355 20.3
PSO063G0728 Papaver somniferum HOM05D003035 ORTHO05D006294 7.3e-07 59.3 132 28.8
Sabra15G0045600 Salix brachista HOM05D002125 ORTHO05D002105 7.3e-07 59.3 130 23.8
PSO675G2226 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-06 58.5 261 24.5
PSO832G1081 Papaver somniferum HOM05D003035 ORTHO05D000440 2.8e-06 57.4 116 31.0
Sabra15G0044900 Salix brachista HOM05D002125 ORTHO05D002105 2.8e-06 57.4 130 23.8
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.6e-06 57.0 261 24.1
PSO017G5588 Papaver somniferum HOM05D003035 ORTHO05D000440 3.6e-06 57.0 95 26.3
Thecc.07G029900 Theobroma cacao HOM05D001286 ORTHO05D000440 3.6e-06 57.0 113 31.0
PSO302G0205 Papaver somniferum HOM05D003035 ORTHO05D006294 4.7e-06 56.6 130 26.2
PSO339G3493 Papaver somniferum HOM05D003035 ORTHO05D000440 6.2e-06 56.2 114 32.5
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 8.1e-06 55.8 122 23.8


User provided reference genes

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