Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 0.0e+00 1330.9 682 100.0
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-299 1032.3 582 92.6
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 4.6e-185 652.1 647 58.6
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 3.7e-166 589.3 674 52.7
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-151 541.2 572 56.3
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-82 310.8 631 38.4
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-78 298.1 258 60.1
Lj1g0024783 Lotus japonicus HOM05D008220 ORTHO05D010358 4.6e-68 263.5 481 39.7
Lj5g0008704 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-63 248.8 370 45.4
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-56 224.9 664 33.1
LjContig00136g0020509 Lotus japonicus HOM05D008220 ORTHO05D010358 2.7e-52 211.1 421 40.9
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 9.1e-48 196.1 278 39.9
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-43 182.2 281 38.4
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-43 181.8 683 28.3
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-40 172.2 556 29.1
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 3.8e-38 164.1 682 26.8
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 5.0e-38 163.7 507 33.7
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-36 158.7 255 36.5
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-36 158.7 690 26.7
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-35 155.2 668 26.9
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-33 148.7 295 33.2
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-33 148.3 342 31.9
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-31 142.1 688 25.0
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 5.9e-31 140.2 318 30.2
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 6.5e-30 136.7 315 31.4
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-29 136.0 570 27.4
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-29 136.0 315 31.4
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 7.2e-29 133.3 338 31.1
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 2.7e-28 131.3 301 28.6
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-27 129.4 533 27.6
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-27 128.6 352 30.7
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-22 111.7 274 30.3
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-22 111.3 208 32.7
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 8.5e-22 109.8 279 27.6
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-21 108.2 279 27.6
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-21 107.8 216 31.9
Lj1g0012808 Lotus japonicus HOM05D008220 ORTHO05D010358 9.4e-21 106.3 509 28.9
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-20 105.5 293 32.1
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-19 102.1 163 32.5
Lj3g0028205 Lotus japonicus HOM05D008220 ORTHO05D010358 3.0e-19 101.3 498 27.7
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 7.5e-18 96.7 318 26.7
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.8e-18 96.3 411 23.6
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 4.9e-17 94.0 256 26.2
Lj1g0021549 Lotus japonicus HOM05D008220 ORTHO05D010358 8.3e-17 93.2 287 31.4
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-16 92.4 188 32.4
Lj6g0000075 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-16 91.7 363 31.4
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 9.2e-16 89.7 301 25.9
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-14 86.3 442 25.3
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-14 85.9 310 23.2
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.9e-14 84.7 307 25.7
Lj3g0003280 Lotus japonicus HOM05D008220 ORTHO05D010358 5.0e-14 84.0 308 26.6
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.5e-13 81.6 289 25.3
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 7.3e-13 80.1 182 28.6
Lj4g0013222 Lotus japonicus HOM05D002777 ORTHO05D001516 7.3e-13 80.1 294 25.9
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-12 79.0 184 30.4
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.8e-12 78.2 311 24.1
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.8e-12 78.2 311 25.1
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.0e-12 76.6 303 22.8
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-11 76.3 302 23.5
Ah.06g186480 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.8e-11 75.5 316 23.1
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 2.3e-11 75.1 211 28.9
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-11 74.7 282 22.0
Phvul.005G131700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.8e-11 73.6 389 24.2
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.9e-11 73.2 298 24.2
Lj5g0006780 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-10 72.0 119 33.6
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.6e-10 71.6 307 22.5
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-10 71.6 291 22.3
Phvul.002G142300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.4e-10 70.9 210 28.1
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.4e-10 70.9 285 22.8
LjContig00357g0023212 Lotus japonicus HOM05D002777 ORTHO05D001516 5.7e-10 70.5 418 23.0
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.7e-10 70.5 282 23.4
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.7e-10 70.5 188 28.7
Phvul.002G156300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.5e-10 70.1 269 24.5
Lj5g0026451 Lotus japonicus HOM05D008220 ORTHO05D010358 1.3e-09 69.3 284 24.6
Lj2g0023598 Lotus japonicus HOM05D008220 ORTHO05D010358 1.7e-09 68.9 488 27.9
Phvul.010G029500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-09 68.9 262 24.4
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.2e-09 68.6 285 22.8
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.7e-09 67.8 170 27.6
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.4e-09 67.0 164 26.2
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 8.3e-09 66.6 283 22.6
Phvul.010G016100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.3e-09 66.6 402 21.9
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.4e-08 65.9 77 35.1
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-08 65.9 272 23.9
Atru.chr2.3312 Acer truncatum HOM05D016018 ORTHO05D017146 1.8e-08 65.5 175 30.3
Medtr5g073130 Medicago truncatula HOM05D008558 ORTHO05D001516 2.4e-08 65.1 247 24.3
Phvul.001G088300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.4e-08 65.1 267 23.2
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.4e-08 65.1 269 21.2
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.2e-08 64.7 93 35.5
Lj6g0001789 Lotus japonicus HOM05D019244 ORTHO05D010358 3.2e-08 64.7 77 40.3
Medtr2g060030 Medicago truncatula HOM05D008558 ORTHO05D011658 3.2e-08 64.7 295 21.7
Lj6g0008950 Lotus japonicus HOM05D019244 ORTHO05D036501 4.1e-08 64.3 116 33.6
Lj4g0019865 Lotus japonicus HOM05D019244 ORTHO05D036501 5.4e-08 63.9 79 40.5
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.0e-08 63.5 318 22.6
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.0e-08 63.5 392 21.2
Lj5g0001897 Lotus japonicus HOM05D002777 ORTHO05D001516 9.2e-08 63.2 266 25.9
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 9.2e-08 63.2 300 21.3
Lj6g0007004 Lotus japonicus HOM05D019244 ORTHO05D010358 1.2e-07 62.8 83 43.4
LjContig00272g0003214 Lotus japonicus HOM05D019244 ORTHO05D036501 2.7e-07 61.6 97 35.1
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 3.5e-07 61.2 199 26.6
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.6e-07 60.8 281 22.1
Lj6g0026012 Lotus japonicus HOM05D008220 ORTHO05D010358 5.9e-07 60.5 196 25.5
Phvul.008G164400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.9e-07 60.5 257 20.6
Sc10g0006460 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.9e-07 60.5 94 31.9
Atru.chr3.2350 Acer truncatum HOM05D016018 ORTHO05D017146 7.8e-07 60.1 317 22.1
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 7.8e-07 60.1 192 23.4
Lj3g0021978 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-06 59.3 343 22.4
Phvul.002G139600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-06 59.3 290 21.4
Sc23g0003820 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-06 59.3 96 31.2
Lj5g0022095 Lotus japonicus HOM05D002777 ORTHO05D001516 1.7e-06 58.9 149 25.5
Sc01g0005690 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-06 58.9 232 22.4
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-06 58.9 76 38.2
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.3e-06 58.5 78 39.7
Lj1g0014390 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-06 58.5 310 21.6
Ah.11g045590 Amaranthus hybridus HOM05D000851 ORTHO05D003960 3.0e-06 58.2 94 35.1
Manes.06G033475 Manihot esculenta HOM05D009258 ORTHO05D001516 3.0e-06 58.2 172 23.3
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.0e-06 58.2 79 36.7
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.9e-06 57.8 84 32.1
Phvul.001G154000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.0e-06 57.4 295 21.4
Phvul.011G132400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.0e-06 57.4 316 22.8
Sc06g0006000 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.0e-06 57.4 75 41.3
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 5.0e-06 57.4 225 23.6
BcaC04g22159 Brassica carinata HOM05D000285 ORTHO05D000241 6.6e-06 57.0 87 37.9
C09p22690 Brassica napus HOM05D000285 ORTHO05D000241 6.6e-06 57.0 87 37.9
Sc09g0006390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.6e-06 57.0 94 36.2
Ah.14g081710 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.6e-06 56.6 80 37.5
Lj4g0004153 Lotus japonicus HOM05D008220 ORTHO05D010358 8.6e-06 56.6 168 29.2
Sc07g0006510 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.6e-06 56.6 165 22.4


User provided reference genes

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