Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0002039 Lotus japonicus HOM05D004972 ORTHO05D006309 1.7e-128 462.6 225 100.0
Phvul.007G035700 Phaseolus vulgaris HOM05D004972 ORTHO05D006309 3.7e-107 391.7 225 84.0
VMungo0720G3073 Vigna mungo HOM05D004972 ORTHO05D006309 1.8e-106 389.4 225 83.6
Glyma.10G266000 Glycine max HOM05D004972 ORTHO05D006309 5.0e-104 381.3 225 81.8
Glyma.20G124600 Glycine max HOM05D004972 ORTHO05D006309 5.0e-104 381.3 226 82.3
Psat6g222200 Pisum sativum HOM05D004972 ORTHO05D006309 1.1e-103 380.2 225 81.8
TPR.G4886 Trifolium pratense HOM05D004972 ORTHO05D006309 3.3e-103 378.6 225 81.8
Ca_11105_v3 Cicer arietinum L. HOM05D004972 ORTHO05D006309 1.2e-102 376.7 225 82.2
Medtr1g108610 Medicago truncatula HOM05D004972 ORTHO05D006309 5.2e-101 371.3 232 78.9
Lalb_Chr06g0165661 Lupinus albus HOM05D004972 ORTHO05D006309 2.6e-100 369.0 225 80.0
MD13G1028600 Malus domestica HOM05D004972 ORTHO05D006309 6.6e-96 354.4 225 74.7
MD16G1031300 Malus domestica HOM05D004972 ORTHO05D006309 1.6e-94 349.7 225 73.8
FAN07G2072 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.6e-94 348.6 225 74.2
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea HOM05D004972 ORTHO05D006309 6.2e-94 347.8 225 74.2
GSVIVG01011786001 Vitis vinifera HOM05D004972 ORTHO05D006309 6.2e-94 347.8 225 74.7
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea HOM05D004972 ORTHO05D006309 8.0e-94 347.4 225 75.1
COL.COLO4_10156 Corchorus olitorius HOM05D004972 ORTHO05D006309 8.0e-94 347.4 225 74.2
FvH4_4g26160 Fragaria vesca HOM05D004972 ORTHO05D006309 1.4e-93 346.7 225 73.8
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea HOM05D004972 ORTHO05D006309 1.8e-93 346.3 225 74.2
FAN12G1431 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.1e-93 345.5 225 73.8
FAN12G3562 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.1e-93 345.5 225 73.8
Ciclev10016597m.g Citrus clementina HOM05D004972 ORTHO05D006309 1.2e-92 343.6 225 72.9
RcHm_v2.0_Chr4g0433731 Rosa chinensis HOM05D004972 ORTHO05D006309 1.5e-92 343.2 225 72.0
Rhsim09G0068400 Rhododendron simsii HOM05D004972 ORTHO05D006309 2.0e-92 342.8 225 72.4
Manes.06G062200 Manihot esculenta HOM05D004972 ORTHO05D006309 2.6e-92 342.4 225 72.0
Potri.010G115800 Populus trichocarpa HOM05D004972 ORTHO05D006309 5.8e-92 341.3 225 72.9
FAN17G1326 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.3e-91 340.1 225 72.9
FAN22G0152 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.3e-91 340.1 225 72.4
Thecc.04G114900 Theobroma cacao HOM05D004972 ORTHO05D006309 1.3e-91 340.1 225 73.8
Actinidia15243 Actinidia chinensis HOM05D004972 ORTHO05D006309 2.2e-91 339.3 225 71.1
Actinidia36689 Actinidia chinensis HOM05D004972 ORTHO05D006309 2.2e-91 339.3 225 71.1
CiPaw.05G247000 Carya illinoinensis HOM05D004972 ORTHO05D006309 2.2e-91 339.3 225 72.9
Dinv16188 Davidia involucrata HOM05D004972 ORTHO05D006309 2.2e-91 339.3 225 73.3
Prupe.1G321700 Prunus persica HOM05D004972 ORTHO05D006309 2.2e-91 339.3 225 72.9
Cfa008573 Carpinus fangiana HOM05D004972 ORTHO05D006309 2.9e-91 339.0 225 73.8
Migut.L00755 Erythranthe guttata HOM05D004972 ORTHO05D006309 2.9e-91 339.0 225 71.6
Actinidia14945 Actinidia chinensis HOM05D004972 ORTHO05D006309 6.4e-91 337.8 225 71.1
Sopen05g004230 Solanum pennellii HOM05D004972 ORTHO05D006309 8.3e-91 337.4 225 71.1
Solyc05g008400.4 Solanum lycopersicum HOM05D004972 ORTHO05D006309 1.4e-90 336.7 225 70.7
PGSC0003DMG400030511 Solanum tuberosum HOM05D004972 ORTHO05D006309 1.4e-90 336.7 225 71.1
CANSAT01G2336 Cannabis sativa HOM05D004972 ORTHO05D006309 3.2e-90 335.5 225 72.0
Nitab4.5_0004692g0050 Nicotiana tabacum HOM05D004972 ORTHO05D006309 5.4e-90 334.7 223 71.7
Dinv05881 Davidia involucrata HOM05D004972 ORTHO05D006309 9.2e-90 334.0 224 71.9
Gohir.D12G057200 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.6e-89 333.2 225 72.0
CAN.G1693.8 Capsicum annuum HOM05D004972 ORTHO05D006309 2.0e-89 332.8 225 71.6
CiPaw.06G013900 Carya illinoinensis HOM05D004972 ORTHO05D006309 2.7e-89 332.4 227 72.2
CSS0013445 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.3e-88 330.1 226 71.2
CSS0024462 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.3e-88 330.1 226 71.2
THA.LOC104825471 Tarenaya hassleriana HOM05D004972 ORTHO05D006309 1.3e-88 330.1 225 72.0
AT5G13240 Arabidopsis thaliana HOM05D004972 ORTHO05D006309 2.3e-88 329.3 225 72.4
Atru.chr11.981 Acer truncatum HOM05D004972 ORTHO05D006309 3.0e-88 328.9 225 70.7
Peaxi162Scf00205g00614 Petunia axillaris HOM05D004972 ORTHO05D006309 3.0e-88 328.9 225 69.3
TWI79G0317 Tripterygium wilfordii HOM05D004972 ORTHO05D006309 3.0e-88 328.9 225 72.4
Lj6C749G10 Lonicera japonica HOM05D004972 ORTHO05D006309 6.6e-88 327.8 224 71.4
Eucgr.G02212 Eucalyptus grandis HOM05D004972 ORTHO05D006309 1.1e-87 327.0 225 70.2
CsaV3_5G034860 Cucumis sativus L. HOM05D004972 ORTHO05D006309 1.5e-87 326.6 225 70.7
SGA_v2.0_scaffold50G18531 Striga asiatica HOM05D004972 ORTHO05D006309 1.5e-87 326.6 225 70.7
Gohir.A12G057400 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.9e-87 326.2 225 70.7
Carub.0006s1141 Capsella rubella HOM05D004972 ORTHO05D006309 3.3e-87 325.5 225 72.0
Sc04g0005680 Simmondsia chinensis HOM05D004972 ORTHO05D006309 3.3e-87 325.5 226 71.2
QL01p002347 Quercus lobata HOM05D004972 ORTHO05D006309 5.6e-87 324.7 279 60.6
AL6G23850 Arabidopsis lyrata HOM05D004972 ORTHO05D006309 7.3e-87 324.3 225 71.6
DCAR_030202 Daucus carota HOM05D004972 ORTHO05D006309 9.5e-87 323.9 226 69.9
Gohir.A07G173000 Gossypium hirsutum HOM05D004972 ORTHO05D006309 9.5e-87 323.9 225 70.2
Oeu044327.1 Olea europaea HOM05D004972 ORTHO05D006309 9.5e-87 323.9 225 70.7
Sed0026570 Sechium edule HOM05D004972 ORTHO05D006309 9.5e-87 323.9 225 70.7
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.2e-86 323.6 225 69.3
MSTRG.882 Avicennia marina HOM05D004972 ORTHO05D006309 1.6e-86 323.2 225 69.3
A10p24970 Brassica napus HOM05D004972 ORTHO05D006309 2.8e-86 322.4 225 71.1
Thhalv10014602m.g Eutrema salsugineum HOM05D004972 ORTHO05D006309 3.6e-86 322.0 225 71.6
Sp6g30750 Schrenkiella parvula HOM05D004972 ORTHO05D006309 3.6e-86 322.0 225 71.1
BraA10t44559Z Brassica rapa HOM05D004972 ORTHO05D006309 6.2e-86 321.2 225 70.7
Gorai.001G201700 Gossypium raimondii HOM05D004972 ORTHO05D006309 6.2e-86 321.2 225 69.8
BcaC04g19133 Brassica carinata HOM05D004972 ORTHO05D006309 8.1e-86 320.9 225 70.7
BolC9t59224H Brassica oleracea HOM05D004972 ORTHO05D006309 8.1e-86 320.9 225 70.7
Cc11_g09090 Coffea canephora HOM05D004972 ORTHO05D006309 8.1e-86 320.9 225 70.7
Gohir.D07G180500 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.4e-85 320.1 225 69.3
C09p63840 Brassica napus HOM05D004972 ORTHO05D006309 1.8e-85 319.7 225 70.2
EL10Ac6g14241 Beta vulgaris HOM05D004972 ORTHO05D006309 6.8e-85 317.8 225 68.4
AUR62014195 Chenopodium quinoa HOM05D004972 ORTHO05D006309 1.2e-84 317.0 225 68.4
Lsat_1_v5_gn_8_42761 Lactuca sativa HOM05D004972 ORTHO05D006309 1.5e-84 316.6 225 66.2
Cpa.g.sc65.108 Carica papaya HOM05D004972 ORTHO05D006309 2.6e-84 315.8 196 76.0
SalBow8G2598 Salvia bowleyana HOM05D004972 ORTHO05D006309 3.4e-84 315.5 226 67.7
Duzib133G0650 Durio zibethinus HOM05D004972 ORTHO05D006309 4.4e-84 315.1 196 76.5
HanXRQChr08g0212881 Helianthus annuus HOM05D004972 ORTHO05D006309 9.8e-84 313.9 225 65.3
ECA233G6099 Erigeron canadensis HOM05D004972 ORTHO05D006309 1.3e-83 313.5 225 66.7
CARHR200210 Cardamine hirsuta HOM05D004972 ORTHO05D006309 2.2e-83 312.8 219 70.8
SGA_v2.0_scaffold38G15047 Striga asiatica HOM05D004972 ORTHO05D006309 2.2e-83 312.8 225 67.1
vmacro01431 Vaccinium macrocarpon HOM05D004972 ORTHO05D006309 4.9e-83 311.6 208 72.1
HanXRQChr07g0189871 Helianthus annuus HOM05D004972 ORTHO05D006309 1.4e-82 310.1 225 64.4
TAR629G1532 Trochodendron aralioides HOM05D004972 ORTHO05D006309 1.4e-82 310.1 225 67.6
MBI07_g18719_MAGBIO Magnolia biondii HOM05D004972 ORTHO05D006309 7.1e-82 307.8 228 67.1
Nitab4.5_0004092g0040 Nicotiana tabacum HOM05D004972 ORTHO05D006309 7.8e-81 304.3 266 59.8
Hund24992 Selenicereus undatus HOM05D004972 ORTHO05D006309 3.0e-80 302.4 260 60.4
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 2.5e-79 299.3 228 65.4
Nn2g14330 Nelumbo nucifera HOM05D004972 ORTHO05D006309 2.1e-78 296.2 225 65.8
Aa31LG3G14420 Aethionema arabicum HOM05D004972 ORTHO05D006309 5.2e-77 291.6 225 64.9
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea HOM05D004972 ORTHO05D006309 6.8e-77 291.2 243 62.1
PSO063G1195 Papaver somniferum HOM05D004972 ORTHO05D006309 8.4e-75 284.3 227 62.1
PSO782G3547 Papaver somniferum HOM05D004972 ORTHO05D006309 8.4e-75 284.3 227 61.7
Haze_11044 Corylus avellana HOM05D004972 ORTHO05D006309 2.4e-74 282.7 225 64.4
Aqoxy3G04360 Aquilegia oxysepala HOM05D004972 ORTHO05D006309 9.2e-74 280.8 225 60.4
Nn6g34668 Nelumbo nucifera HOM05D004972 ORTHO05D006309 6.0e-73 278.1 225 62.7
unitig_0.g2334 Utricularia gibba HOM05D004972 ORTHO05D006309 1.3e-72 276.9 217 61.8
MELO3C012297.2 Cucumis melo HOM05D004972 ORTHO05D006309 1.5e-71 273.5 177 74.0
ClCG05G022260 Citrullus lanatus HOM05D004972 ORTHO05D006309 3.3e-71 272.3 225 62.2
PGR119G0027 Punica granatum HOM05D004972 ORTHO05D006309 9.6e-71 270.8 225 62.2
HPP92_015449 Vanilla planifolia HOM05D004972 ORTHO05D006309 2.8e-70 269.2 228 61.0
Os04g0662900 Oryza sativa ssp. japonica HOM05D004972 ORTHO05D006309 1.1e-69 267.3 225 58.7
CDE09G0103 Ceratophyllum demersum HOM05D004972 ORTHO05D006309 2.6e-68 262.7 230 59.1
Migut.L00658 Erythranthe guttata HOM05D004972 ORTHO05D006309 2.4e-66 256.1 225 59.6
Zm00001eb246210 Zea mays HOM05D004972 ORTHO05D006309 4.2e-66 255.4 210 60.5
BolC2t06543H Brassica oleracea HOM05D004972 ORTHO05D006309 3.0e-64 249.2 229 59.0
Gorai.008G060200 Gossypium raimondii HOM05D004972 ORTHO05D006309 4.3e-63 245.4 225 58.2
ATR0315G127 Amborella trichopoda HOM05D004972 ORTHO05D006309 2.1e-62 243.0 226 55.3
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 2.4e-61 239.6 252 52.4
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 2.4e-61 239.6 252 52.4
AUR62041239 Chenopodium quinoa HOM05D004972 ORTHO05D006309 4.4e-60 235.3 174 66.7
SEGI_23519 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 2.1e-57 226.5 225 51.1
C02p06000 Brassica napus HOM05D004972 ORTHO05D006309 7.4e-55 218.0 193 61.1
Duzib138G1958 Durio zibethinus HOM05D004972 ORTHO05D006309 2.1e-54 216.5 249 50.6
Pp3c11_22300 Physcomitrium patens HOM05D004972 ORTHO05D006309 1.2e-52 210.7 225 48.4
Mapoly0012s0169 Marchantia polymorpha HOM05D004972 ORTHO05D006309 2.2e-51 206.5 225 49.3
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis HOM05D004972 ORTHO05D006309 4.6e-49 198.7 222 47.7
FAN17G1863 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.0e-44 183.3 122 70.5
MCO09G688 Micromonas commoda HOM05D004972 ORTHO05D006309 8.4e-43 177.9 238 42.4
Cre08.g364250 Chlamydomonas reinhardtii HOM05D004972 ORTHO05D006309 9.3e-42 174.5 226 42.9
PRCOL_00004209 Prasinoderma coloniale HOM05D004972 ORTHO05D006309 5.3e-37 158.7 215 43.3
BcaNung01872 Brassica carinata HOM05D004972 ORTHO05D006309 2.9e-35 152.9 130 60.8
SHI16322 Sapria himalayana HOM05D004972 ORTHO05D006309 9.3e-34 147.9 189 46.6
CSS0029214 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 7.4e-31 138.3 100 65.0
CSS0034104 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 3.7e-30 136.0 100 64.0
Pp3c7_4620 Physcomitrium patens HOM05D004972 ORTHO05D006309 1.5e-28 130.6 150 49.3
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.2e-20 104.4 71 66.2
Zm00001eb219440 Zea mays HOM05D009386 ORTHO05D011419 2.1e-17 93.6 66 62.1
CSS0010746 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 8.8e-16 88.2 51 74.5
CSS0040756 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 8.8e-16 88.2 51 74.5
Gorai.001G193400 Gossypium raimondii HOM05D004972 ORTHO05D029864 1.5e-15 87.4 105 49.5
CSS0044245 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.0e-15 87.0 51 74.5
Hma1.2p1_0813F.1_g222490 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 5.7e-15 85.5 51 74.5
Gohir.D01G091150 Gossypium hirsutum HOM05D004972 ORTHO05D029864 2.2e-14 83.6 122 42.6
Zm00001eb025950 Zea mays HOM05D004972 ORTHO05D006309 1.1e-13 81.3 78 51.3
CDE02G3434 Ceratophyllum demersum HOM05D004972 ORTHO05D000215 7.0e-13 78.6 76 55.3
Gorai.010G145600 Gossypium raimondii HOM05D004972 ORTHO05D029864 9.1e-13 78.2 79 51.9
SEGI_16480 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 5.0e-11 72.4 51 70.6
Gohir.D11G085800 Gossypium hirsutum HOM05D001136 ORTHO05D011526 1.9e-10 70.5 64 59.4
Cfa026650 Carpinus fangiana HOM05D004972 ORTHO05D006309 4.2e-10 69.3 219 27.9
CSS0013064 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.2e-09 67.8 51 66.7
SHI16326 Sapria himalayana HOM05D004972 ORTHO05D006309 8.8e-08 61.6 56 58.9
Gorai.001G223500 Gossypium raimondii HOM05D004972 ORTHO05D029864 2.0e-07 60.5 51 56.9


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