Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 1.1e-83 313.5 198 100.0
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 8.8e-44 181.0 197 68.0
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 1.1e-43 180.6 193 54.4
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 4.1e-41 172.2 196 73.5
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 7.7e-40 167.9 194 73.7
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 1.7e-34 150.2 199 54.8
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 2.8e-34 149.4 200 57.0
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 1.9e-30 136.7 211 59.7
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 3.2e-30 136.0 201 63.7
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 6.3e-26 121.7 214 58.4
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 2.2e-23 113.2 76 65.8
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 2.7e-21 106.3 220 55.5
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 8.0e-21 104.8 79 58.2
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 1.2e-19 100.9 64 71.9
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 1.5e-19 100.5 68 69.1
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 1.5e-19 100.5 74 62.2
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 2.0e-19 100.1 90 51.1
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 2.6e-19 99.8 68 63.2
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 2.6e-19 99.8 64 70.3
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 3.4e-19 99.4 48 79.2
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 4.4e-19 99.0 49 79.6
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 4.4e-19 99.0 49 79.6
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 4.4e-19 99.0 63 68.3
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 1.3e-18 97.4 48 75.0
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 1.7e-18 97.1 73 63.0
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 2.8e-18 96.3 185 56.8
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 2.8e-18 96.3 82 56.1
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 2.8e-18 96.3 49 77.6
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 4.8e-18 95.5 47 80.9
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 6.3e-18 95.1 52 69.2
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 6.3e-18 95.1 70 57.1
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 8.3e-18 94.7 77 58.4
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 3.1e-17 92.8 68 64.7
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 5.4e-17 92.0 76 57.9
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 1.2e-16 90.9 57 66.7
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 4.5e-16 89.0 41 85.4
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 5.9e-16 88.6 48 70.8
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 1.3e-15 87.4 46 71.7
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 3.8e-15 85.9 75 53.3
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 8.5e-15 84.7 44 72.7
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 1.2e-13 80.9 80 52.5
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 2.7e-13 79.7 45 68.9
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 3.6e-13 79.3 77 50.6
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 2.0e-11 73.6 55 52.7
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 3.4e-11 72.8 53 56.6
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 3.7e-10 69.3 55 50.9
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 6.3e-10 68.6 40 62.5
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 1.4e-09 67.4 40 60.0
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 1.4e-09 67.4 40 60.0
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 1.4e-09 67.4 40 60.0
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 1.4e-09 67.4 40 60.0
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 1.4e-09 67.4 73 45.2
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.4e-09 67.4 33 75.8
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 1.4e-09 67.4 60 50.0
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 1.8e-09 67.0 40 60.0
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 1.8e-09 67.0 73 45.2
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 1.8e-09 67.0 73 45.2
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 1.8e-09 67.0 73 45.2
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 2.4e-09 66.6 54 48.1
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 2.4e-09 66.6 54 48.1
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 5.4e-09 65.5 40 60.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 7.0e-09 65.1 40 60.0
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 7.0e-09 65.1 40 60.0
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 7.0e-09 65.1 40 60.0
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 1.2e-08 64.3 73 43.8
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 1.2e-08 64.3 40 57.5
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 3.5e-08 62.8 45 51.1
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 4.5e-08 62.4 47 51.1
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 7.7e-08 61.6 66 43.9
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 6.6e-07 58.5 46 54.3
Aqoxy5G01499 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 8.6e-07 58.2 34 64.7


User provided reference genes

Program Settings