Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.0e-190 669.8 333 100.0
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 3.1e-134 482.3 330 73.9
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 8.4e-132 474.2 339 70.2
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 1.3e-127 460.3 331 72.8
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 3.4e-125 452.2 311 74.0
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.9e-123 446.4 345 65.5
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 6.9e-118 427.9 330 69.4
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.1e-112 410.6 339 63.1
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 1.3e-111 407.1 331 62.5
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.5e-109 400.2 338 59.8
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.2e-108 396.4 342 59.9
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 6.5e-108 394.8 340 59.4
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 6.5e-108 394.8 339 59.9
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.4e-107 393.7 329 60.2
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.5e-107 392.9 337 58.2
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 7.2e-107 391.3 331 60.4
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.2e-106 390.6 339 58.7
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.2e-106 390.6 339 58.7
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.0e-105 387.5 338 59.5
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 1.4e-105 387.1 340 58.8
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.4e-105 387.1 331 58.9
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.3e-105 386.3 338 57.1
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 3.0e-105 386.0 339 58.7
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 5.1e-105 385.2 343 58.0
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 6.7e-105 384.8 343 57.1
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 2.0e-104 383.3 339 57.5
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 2.6e-104 382.9 334 57.5
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.4e-102 377.1 341 57.5
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.4e-102 377.1 338 57.4
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 4.5e-101 372.1 335 57.3
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.7e-100 370.2 349 56.2
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 3.8e-100 369.0 339 56.6
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 3.8e-100 369.0 349 55.3
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 5.0e-100 368.6 337 57.3
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 5.0e-100 368.6 340 55.3
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 5.0e-100 368.6 341 55.7
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.1e-99 367.5 339 56.6
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 7.2e-99 364.8 339 54.0
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.6e-98 363.6 339 56.0
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 2.1e-98 363.2 340 55.9
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 2.7e-98 362.8 342 55.3
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.6e-98 362.5 341 55.7
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 6.1e-98 361.7 339 55.8
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.0e-97 360.9 348 55.2
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 2.0e-96 356.7 333 55.3
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 4.4e-96 355.5 322 56.5
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.7e-95 353.6 320 56.2
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.7e-95 353.6 324 55.6
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 3.7e-95 352.4 340 55.6
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 6.3e-95 351.7 344 54.7
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.8e-94 350.1 314 56.1
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 2.4e-94 349.7 337 54.9
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 7.0e-94 348.2 329 52.9
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 9.1e-94 347.8 303 58.7
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 1.2e-93 347.4 330 53.0
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.6e-93 347.1 336 53.6
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 2.6e-93 346.3 337 54.3
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 3.5e-93 345.9 320 55.6
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 5.9e-93 345.1 330 52.7
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 6.5e-92 341.7 324 53.4
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 8.5e-92 341.3 323 54.8
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.1e-91 340.9 318 54.1
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 1.5e-91 340.5 295 57.6
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.9e-91 340.1 339 52.5
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.9e-91 340.1 376 48.7
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 9.4e-91 337.8 295 57.3
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.2e-90 337.4 318 54.7
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.0e-89 334.3 339 51.9
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.8e-89 333.6 330 51.8
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.8e-89 333.6 332 53.0
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 5.2e-89 332.0 332 53.0
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 8.8e-89 331.3 332 53.3
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 5.7e-88 328.6 346 51.2
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 3.1e-86 322.8 425 44.5
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.1e-86 322.8 275 59.6
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 3.5e-85 319.3 326 50.9
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.7e-84 317.0 275 57.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 7.2e-83 311.6 314 49.7
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 3.4e-80 302.8 351 47.0
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 5.7e-80 302.0 353 46.2
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 9.8e-80 301.2 353 47.0
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.2e-79 300.1 338 49.4
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 3.7e-79 299.3 274 55.1
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 1.1e-78 297.7 324 48.8
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 1.4e-78 297.4 280 53.9
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 6.6e-76 288.5 343 46.6
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 8.0e-74 281.6 278 59.4
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.8e-73 280.4 210 64.3
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.5e-72 277.3 349 44.4
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 2.3e-68 263.5 325 42.5
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 2.9e-68 263.1 210 61.4
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 3.6e-58 229.6 220 57.7
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 2.8e-50 203.4 315 35.6
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 2.4e-46 190.3 259 44.0
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 6.6e-44 182.2 185 54.6
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 3.9e-36 156.4 172 46.5
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 1.5e-35 154.5 167 43.1
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 6.9e-33 145.6 248 33.9
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 4.9e-31 139.4 127 59.8
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.9e-30 137.5 175 39.4
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.9e-30 137.5 127 55.9
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.3e-27 126.3 161 43.5
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 9.6e-27 125.2 125 53.6
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 5.8e-24 115.9 104 59.6
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 9.9e-24 115.2 166 39.2
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.9e-23 113.6 93 61.3
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 2.9e-23 113.6 125 52.8
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.4e-22 111.3 156 35.3
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 4.6e-21 106.3 145 44.8
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 8.1e-18 95.5 70 65.7
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 4.2e-14 83.2 86 40.7
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 3.4e-08 63.5 70 50.0
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 4.5e-08 63.2 35 77.1


User provided reference genes

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