Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0000209 Lotus japonicus HOM05D007757 ORTHO05D009619 4.8e-55 218.0 147 100.0
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 7.2e-19 97.8 64 70.3
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 1.6e-18 96.7 80 60.0
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 2.0e-16 89.7 61 65.6
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 4.4e-16 88.6 60 66.7
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 1.8e-14 83.2 69 58.0
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 4.1e-14 82.0 62 61.3
VMungo0720G1194 Vigna mungo HOM05D007757 ORTHO05D009619 7.0e-14 81.3 67 58.2
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 1.2e-13 80.5 69 58.0
Ca_11172_v3 Cicer arietinum L. HOM05D007757 ORTHO05D009619 2.0e-13 79.7 68 55.9
Lalb_Chr06g0166051 Lupinus albus HOM05D007757 ORTHO05D009619 1.0e-12 77.4 69 56.5
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 1.6e-10 70.1 71 47.9
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 6.8e-09 64.7 63 47.6
Nn3g17848 Nelumbo nucifera HOM05D021434 ORTHO05D009619 8.9e-09 64.3 66 39.4
Sabra10G0094600 Salix brachista HOM05D007757 ORTHO05D009619 1.2e-08 63.9 71 46.5
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 2.0e-08 63.2 75 46.7
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 2.0e-08 63.2 75 46.7
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 5.8e-08 61.6 60 46.7
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 5.8e-08 61.6 71 43.7
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 5.8e-08 61.6 54 53.7
Ciclev10017153m.g Citrus clementina HOM05D007757 ORTHO05D009619 2.2e-07 59.7 62 48.4
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 2.2e-07 59.7 64 45.3
Nn3g17018 Nelumbo nucifera HOM05D021434 ORTHO05D009619 2.9e-07 59.3 72 40.3
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 6.4e-07 58.2 61 47.5
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 6.4e-07 58.2 77 42.9
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 1.9e-06 56.6 54 50.0
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 2.4e-06 56.2 68 44.1
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 2.4e-06 56.2 62 41.9
Nn4g23846 Nelumbo nucifera HOM05D021434 ORTHO05D009619 4.1e-06 55.5 68 39.7
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 5.4e-06 55.1 68 42.6
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 7.0e-06 54.7 68 44.1


User provided reference genes

Program Settings