Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 1.2e-33 146.0 78 100.0
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 2.0e-28 128.6 78 85.9
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 2.7e-28 128.3 78 85.9
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 5.0e-27 124.0 78 83.3
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 9.4e-26 119.8 78 85.9
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 1.6e-25 119.0 78 83.3
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 4.7e-25 117.5 78 84.6
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.0e-23 112.1 79 79.7
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 2.6e-23 111.7 75 80.0
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 7.5e-23 110.2 79 78.5
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 8.3e-22 106.7 73 78.1
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 2.4e-21 105.1 78 71.8
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 2.4e-21 105.1 78 71.8
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.4e-21 105.1 79 77.2
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 4.1e-21 104.4 75 74.7
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 4.1e-21 104.4 78 74.4
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 4.1e-21 104.4 78 74.4
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 7.0e-21 103.6 74 79.7
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.6e-20 102.4 75 73.3
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 2.0e-20 102.1 75 76.0
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 5.9e-20 100.5 74 78.4
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 7.7e-20 100.1 74 74.3
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 1.0e-19 99.8 74 77.0
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 1.3e-19 99.4 78 71.8
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 1.7e-19 99.0 75 76.0
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 1.7e-19 99.0 74 77.0
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 1.7e-19 99.0 75 70.7
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 2.3e-19 98.6 70 77.1
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 2.3e-19 98.6 75 72.0
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 3.8e-19 97.8 75 74.7
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 3.8e-19 97.8 78 71.8
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 5.0e-19 97.4 78 69.2
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 5.0e-19 97.4 74 74.3
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 6.6e-19 97.1 75 74.7
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 1.5e-18 95.9 79 68.4
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 1.5e-18 95.9 76 73.7
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 2.5e-18 95.1 73 72.6
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 5.5e-18 94.0 76 71.1
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 1.2e-17 92.8 73 71.2
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 1.2e-17 92.8 78 67.9
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 2.1e-17 92.0 75 68.0
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 3.6e-17 91.3 80 68.8
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 4.7e-17 90.9 73 68.5
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 4.7e-17 90.9 76 68.4
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 1.0e-16 89.7 78 67.9
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 2.3e-16 88.6 73 67.1
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.0e-16 88.2 75 68.0
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 6.8e-16 87.0 73 67.1
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 1.2e-15 86.3 73 67.1
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.5e-15 85.9 82 62.2
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 4.4e-15 84.3 89 57.3
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 5.7e-15 84.0 86 57.0
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 1.3e-14 82.8 73 65.8
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 1.7e-14 82.4 73 64.4
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 1.7e-14 82.4 76 65.8
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 3.7e-14 81.3 77 62.3
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 3.7e-14 81.3 73 65.8
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 6.3e-14 80.5 70 65.7
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 6.3e-14 80.5 70 65.7
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 8.3e-14 80.1 73 65.8
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 1.4e-13 79.3 70 65.7
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 1.4e-13 79.3 70 65.7
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 2.4e-13 78.6 77 58.4
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 2.4e-13 78.6 83 60.2
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 4.1e-13 77.8 75 60.0
Glyma.06G046700 Glycine max HOM05D015670 ORTHO05D009588 7.0e-13 77.0 73 63.0
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 9.2e-13 76.6 78 65.4
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 1.6e-12 75.9 70 61.4
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 2.7e-12 75.1 73 58.9
Medtr3g103180 Medicago truncatula HOM05D015670 ORTHO05D009588 3.5e-12 74.7 73 63.0
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 3.5e-12 74.7 73 58.9
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 7.8e-12 73.6 77 57.1
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 2.3e-11 72.0 88 53.4
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 2.9e-11 71.6 90 54.4
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 6.6e-11 70.5 75 60.0
Glyma.04G045900 Glycine max HOM05D015670 ORTHO05D009588 8.6e-11 70.1 73 58.9
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 1.5e-10 69.3 100 48.0
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.9e-10 68.9 72 58.3
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 9.5e-10 66.6 78 50.0
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 9.5e-10 66.6 86 53.5
Phvul.001G027900 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 8.0e-09 63.5 74 55.4
Phvul.009G071900 Phaseolus vulgaris HOM05D015670 ORTHO05D009588 1.0e-08 63.2 33 93.9
Lalb_Chr23g0267531 Lupinus albus HOM05D015670 ORTHO05D009588 2.3e-08 62.0 36 86.1
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 3.1e-08 61.6 70 60.0
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 4.0e-08 61.2 67 56.7
GSVIVG01009342001 Vitis vinifera HOM05D007769 ORTHO05D009588 1.5e-07 59.3 79 54.4
Psat5g038880 Pisum sativum HOM05D015670 ORTHO05D009588 2.6e-07 58.5 73 50.7
Lalb_Chr08g0245551 Lupinus albus HOM05D015670 ORTHO05D009588 1.3e-06 56.2 28 92.9
Lalb_Chr11g0062881 Lupinus albus HOM05D015670 ORTHO05D009588 1.3e-06 56.2 28 92.9


User provided reference genes

Program Settings