Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P824T21 Lonicera japonica HOM05D011560 ORTHO05D000012 3.4e-55 218.0 105 100.0
Lj5A790T7 Lonicera japonica HOM05D011560 ORTHO05D000012 1.9e-45 185.7 104 81.7
Lj5C825T1 Lonicera japonica HOM05D011560 ORTHO05D000012 2.5e-42 175.3 104 78.8
Lj5P824T20 Lonicera japonica HOM05D011560 ORTHO05D000012 9.7e-42 173.3 98 82.7
Lj5C789T4 Lonicera japonica HOM05D011560 ORTHO05D000012 1.1e-40 169.9 104 76.9
Lj2C634G4 Lonicera japonica HOM05D011560 ORTHO05D000012 1.3e-38 162.9 104 73.1
Lj5P791T15 Lonicera japonica HOM05D011560 ORTHO05D000012 1.1e-37 159.8 102 69.6
Lj5A791G16 Lonicera japonica HOM05D011560 ORTHO05D000012 3.2e-37 158.3 102 67.6
Lj5P824T16 Lonicera japonica HOM05D011560 ORTHO05D000012 9.4e-37 156.8 102 68.6
Lj8P534T7 Lonicera japonica HOM05D011560 ORTHO05D000012 1.4e-35 152.9 104 68.3
Lj5P787T11 Lonicera japonica HOM05D011560 ORTHO05D000012 2.7e-28 128.6 101 61.4
Actinidia02390 Actinidia chinensis HOM05D000005 ORTHO05D000012 2.6e-18 95.5 103 47.6
Lj5A794T35 Lonicera japonica HOM05D011560 ORTHO05D000012 1.3e-17 93.2 105 41.0
Lj5P787T15 Lonicera japonica HOM05D011560 ORTHO05D000012 8.5e-14 80.5 102 36.3
vmacro01857 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 1.1e-13 80.1 99 44.4
vmacro01858 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 9.5e-13 77.0 105 41.0
vmacro01859 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 1.2e-12 76.6 103 39.8
Lj5P794T32 Lonicera japonica HOM05D011560 ORTHO05D000012 1.8e-11 72.8 71 43.7
Prupe.6G083200 Prunus persica HOM05D000005 ORTHO05D000012 2.8e-09 65.5 91 36.3
RcHm_v2.0_Chr1g0348311 Rosa chinensis HOM05D000005 ORTHO05D000012 1.1e-08 63.5 84 39.3
RcHm_v2.0_Chr1g0348361 Rosa chinensis HOM05D000005 ORTHO05D000012 1.8e-08 62.8 84 39.3
MD05G1140100 Malus domestica HOM05D000005 ORTHO05D000012 2.7e-07 58.9 86 34.9
Dinv38457 Davidia involucrata HOM05D010983 ORTHO05D000012 3.5e-07 58.5 100 30.0
Dinv38455 Davidia involucrata HOM05D000005 ORTHO05D000012 1.0e-06 57.0 102 31.4
FAN03G1873 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-06 56.2 99 34.3
FAN10G1219 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-06 56.2 98 34.7
Dinv38459 Davidia involucrata HOM05D000005 ORTHO05D000012 2.3e-06 55.8 102 31.4
FvH4_7g10750 Fragaria vesca HOM05D000005 ORTHO05D000012 2.9e-06 55.5 99 34.3
FAN06G2906 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.9e-06 55.5 99 34.3
Prupe.8G185300 Prunus persica HOM05D000005 ORTHO05D000012 2.9e-06 55.5 94 33.0
Dinv38449 Davidia involucrata HOM05D000005 ORTHO05D000012 5.0e-06 54.7 95 30.5
Potri.007G099700 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.0e-06 54.7 84 33.3
FAN06G4048 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.6e-06 54.3 85 35.3
FAN15G2828 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.6e-06 54.3 98 28.6
FvH4_7g10510 Fragaria vesca HOM05D000005 ORTHO05D000012 8.6e-06 53.9 85 34.1


User provided reference genes

Program Settings