Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P787T15 Lonicera japonica HOM05D011560 ORTHO05D000012 2.9e-87 325.1 152 100.0
Lj5A794T35 Lonicera japonica HOM05D011560 ORTHO05D000012 2.0e-43 179.5 155 60.6
Lj5A790T7 Lonicera japonica HOM05D011560 ORTHO05D000012 2.1e-29 132.9 145 48.3
Lj2C634G4 Lonicera japonica HOM05D011560 ORTHO05D000012 3.6e-29 132.1 151 46.4
Lj5P794T32 Lonicera japonica HOM05D011560 ORTHO05D000012 1.5e-27 126.7 95 66.3
Lj5A791G16 Lonicera japonica HOM05D011560 ORTHO05D000012 4.4e-27 125.2 151 43.7
Lj5C789T4 Lonicera japonica HOM05D011560 ORTHO05D000012 3.7e-26 122.1 146 45.2
Lj5C825T1 Lonicera japonica HOM05D011560 ORTHO05D000012 3.7e-26 122.1 146 45.2
Lj5P824T16 Lonicera japonica HOM05D011560 ORTHO05D000012 8.3e-26 120.9 145 43.4
Lj5P791T15 Lonicera japonica HOM05D011560 ORTHO05D000012 1.3e-23 113.6 128 44.5
Lj5P787T11 Lonicera japonica HOM05D011560 ORTHO05D000012 1.7e-23 113.2 148 41.2
vmacro01858 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 1.6e-21 106.7 141 43.3
Lj5P824T20 Lonicera japonica HOM05D011560 ORTHO05D000012 1.4e-20 103.6 115 44.3
Lj8P534T7 Lonicera japonica HOM05D011560 ORTHO05D000012 1.4e-20 103.6 132 40.2
Actinidia02390 Actinidia chinensis HOM05D000005 ORTHO05D000012 2.0e-19 99.8 143 40.6
vmacro01859 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 2.8e-18 95.9 138 39.1
vmacro01857 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 2.0e-16 89.7 132 43.2
Dinv29687 Davidia involucrata HOM05D000005 ORTHO05D000012 9.5e-14 80.9 141 36.9
Lj5P824T21 Lonicera japonica HOM05D011560 ORTHO05D000012 2.1e-13 79.7 102 36.3
Dinv38459 Davidia involucrata HOM05D000005 ORTHO05D000012 3.6e-13 79.0 123 40.7
Dinv29646 Davidia involucrata HOM05D000005 ORTHO05D000012 2.3e-12 76.3 121 38.8
Dinv38457 Davidia involucrata HOM05D010983 ORTHO05D000012 4.0e-12 75.5 140 37.1
Dinv00400 Davidia involucrata HOM05D000005 ORTHO05D000012 8.9e-12 74.3 145 35.9
Actinidia00144 Actinidia chinensis HOM05D000005 ORTHO05D000012 1.5e-11 73.6 146 37.0
vmacro01620 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 1.5e-11 73.6 128 40.6
vmacro23186 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 1.5e-11 73.6 128 40.6
Dinv38451 Davidia involucrata HOM05D000005 ORTHO05D000012 5.7e-11 71.6 123 36.6
Dinv01685 Davidia involucrata HOM05D000005 ORTHO05D000012 3.7e-10 68.9 121 37.2
MD05G1140100 Malus domestica HOM05D000005 ORTHO05D000012 8.3e-10 67.8 136 32.4
CSS0009639 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.4e-09 67.0 131 36.6
RcHm_v2.0_Chr1g0346831 Rosa chinensis HOM05D000005 ORTHO05D000012 1.8e-09 66.6 139 33.8
Dinv29640 Davidia involucrata HOM05D000005 ORTHO05D000012 2.4e-09 66.2 121 36.4
CSS0049718 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 7.0e-09 64.7 144 33.3
Dinv38455 Davidia involucrata HOM05D000005 ORTHO05D000012 7.0e-09 64.7 120 35.8
FvH4_2g20310 Fragaria vesca HOM05D000005 ORTHO05D000012 7.0e-09 64.7 130 32.3
FAN24G1486 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.0e-09 64.7 130 32.3
CSS0037441 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.2e-08 63.9 127 34.6
MD05G1152200 Malus domestica HOM05D000005 ORTHO05D000012 1.6e-08 63.5 150 30.7
Dinv38447 Davidia involucrata HOM05D000005 ORTHO05D000012 2.7e-08 62.8 126 34.9
Nn8g40948 Nelumbo nucifera HOM05D000005 ORTHO05D000012 3.5e-08 62.4 118 32.2
Dinv38448 Davidia involucrata HOM05D000005 ORTHO05D000012 4.6e-08 62.0 123 35.0
Dinv38450 Davidia involucrata HOM05D000005 ORTHO05D000012 7.8e-08 61.2 123 35.0
MD02G1302100 Malus domestica HOM05D000005 ORTHO05D000012 7.8e-08 61.2 153 32.7
Dinv29641 Davidia involucrata HOM05D000005 ORTHO05D000012 1.0e-07 60.8 149 32.2
MD08G1020800 Malus domestica HOM05D000005 ORTHO05D000012 1.0e-07 60.8 123 37.4
CSS0022340 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.7e-07 60.1 128 33.6
RcHm_v2.0_Chr4g0405381 Rosa chinensis HOM05D000005 ORTHO05D000012 1.7e-07 60.1 139 36.0
RcHm_v2.0_Chr6g0281981 Rosa chinensis HOM05D000005 ORTHO05D000012 1.7e-07 60.1 136 30.1
FAN27G2507 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.3e-07 59.7 96 36.5
Potri.007G099700 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.3e-07 59.7 120 35.0
PGSC0003DMG400018216 Solanum tuberosum HOM05D000005 ORTHO05D000012 2.3e-07 59.7 77 39.0
FAN15G0869 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.0e-07 59.3 123 30.9
Prupe.2G101900 Prunus persica HOM05D000005 ORTHO05D000012 3.0e-07 59.3 95 34.7
RcHm_v2.0_Chr6g0286441 Rosa chinensis HOM05D000005 ORTHO05D022599 3.0e-07 59.3 95 35.8
Hma1.2p1_0188F.1_g082485 Hydrangea macrophylla HOM05D000005 ORTHO05D000012 3.9e-07 58.9 121 32.2
MD08G1019400 Malus domestica HOM05D000005 ORTHO05D000012 3.9e-07 58.9 99 37.4
FvH4_7g10750 Fragaria vesca HOM05D000005 ORTHO05D000012 5.0e-07 58.5 81 40.7
FAN03G1873 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.0e-07 58.5 81 40.7
FAN06G2906 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.0e-07 58.5 81 40.7
MD08G1019200 Malus domestica HOM05D000005 ORTHO05D000012 5.0e-07 58.5 123 35.8
Lsat_1_v5_gn_1_102140 Lactuca sativa HOM05D000005 ORTHO05D000012 6.6e-07 58.2 120 31.7
CSS0000854 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 1.5e-06 57.0 126 32.5
MD15G1375200 Malus domestica HOM05D000005 ORTHO05D000012 1.5e-06 57.0 136 29.4
Prupe.2G126800 Prunus persica HOM05D000005 ORTHO05D000012 1.5e-06 57.0 127 35.4
Prupe.3G130900 Prunus persica HOM05D000005 ORTHO05D000012 1.5e-06 57.0 97 35.1
FAN20G0848 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.9e-06 56.6 95 33.7
FAN24G3126 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.9e-06 56.6 95 34.7
MD07G1079200 Malus domestica HOM05D000005 ORTHO05D000012 1.9e-06 56.6 138 32.6
MD07G1103200 Malus domestica HOM05D000005 ORTHO05D000012 2.5e-06 56.2 119 36.1
FvH4_2g20700 Fragaria vesca HOM05D000005 ORTHO05D022599 3.3e-06 55.8 98 34.7
Lsat_1_v5_gn_8_112140 Lactuca sativa HOM05D000005 ORTHO05D000012 4.3e-06 55.5 130 31.5
MD08G1020500 Malus domestica HOM05D000005 ORTHO05D000012 4.3e-06 55.5 85 36.5
Prupe.3G130800 Prunus persica HOM05D000005 ORTHO05D000012 7.3e-06 54.7 97 34.0
CAN.G1372.2 Capsicum annuum HOM05D000005 ORTHO05D000012 9.5e-06 54.3 77 33.8


User provided reference genes

Program Settings