Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P773T39 Lonicera japonica HOM05D000092 ORTHO05D000042 3.5e-77 291.6 149 100.0
Lj5P804T10 Lonicera japonica HOM05D000092 ORTHO05D000042 6.1e-58 227.6 158 78.5
Lj4C322T4 Lonicera japonica HOM05D000092 ORTHO05D000042 6.8e-41 171.0 159 59.7
Lj4A322G46 Lonicera japonica HOM05D000092 ORTHO05D000042 1.2e-40 170.2 159 59.7
Lj4C326T3 Lonicera japonica HOM05D000092 ORTHO05D000042 9.9e-40 167.2 159 59.1
Lj4A323T38 Lonicera japonica HOM05D000092 ORTHO05D000042 4.9e-39 164.9 159 58.5
Lj5C777T3 Lonicera japonica HOM05D000092 ORTHO05D000042 3.0e-36 155.6 158 54.4
Lj5A774G52 Lonicera japonica HOM05D000092 ORTHO05D000042 5.1e-36 154.8 151 57.0
Lj5C778T2 Lonicera japonica HOM05D000092 ORTHO05D000042 1.5e-35 153.3 151 58.9
Lj5P774T50 Lonicera japonica HOM05D000092 ORTHO05D000042 1.9e-35 152.9 82 93.9
Lj5A772G60 Lonicera japonica HOM05D000092 ORTHO05D000042 6.2e-34 147.9 150 55.3
Lj5C706T3 Lonicera japonica HOM05D000092 ORTHO05D000042 3.1e-33 145.6 158 55.7
Lj5C803T8 Lonicera japonica HOM05D000092 ORTHO05D000042 2.0e-32 142.9 150 54.0
Lj5C541T0 Lonicera japonica HOM05D000092 ORTHO05D000042 4.4e-32 141.7 155 54.2
Lj5C545T1 Lonicera japonica HOM05D000092 ORTHO05D000042 5.8e-32 141.4 155 53.5
Lj5C804T6 Lonicera japonica HOM05D000092 ORTHO05D000042 1.3e-31 140.2 150 54.0
Lj5C779T0 Lonicera japonica HOM05D000092 ORTHO05D000042 4.9e-31 138.3 150 54.0
Lj5C698T4 Lonicera japonica HOM05D000092 ORTHO05D000042 1.9e-27 126.3 157 52.2
Lj5C806T3 Lonicera japonica HOM05D000092 ORTHO05D000042 1.2e-26 123.6 150 52.7
Lj3P572T13 Lonicera japonica HOM05D000092 ORTHO05D000042 2.4e-22 109.4 102 58.8
Dinv05714 Davidia involucrata HOM05D000092 ORTHO05D000042 3.0e-20 102.4 150 46.7
Lj5C707G1 Lonicera japonica HOM05D000092 ORTHO05D000042 3.3e-19 99.0 156 44.9
Lj1C1089T10 Lonicera japonica HOM05D000092 ORTHO05D000042 3.6e-18 95.5 130 45.4
Lj3C14T0 Lonicera japonica HOM05D000092 ORTHO05D000042 3.1e-17 92.4 152 38.8
Lj5C706G1 Lonicera japonica HOM05D000092 ORTHO05D000042 5.3e-17 91.7 156 42.9
Lj5C780T0 Lonicera japonica HOM05D000092 ORTHO05D000042 9.9e-16 87.4 150 40.0
Lju124A47T120 Lonicera japonica HOM05D000092 ORTHO05D000042 1.9e-14 83.2 151 43.0
Dinv05715 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-14 82.8 152 41.4
Lj1C1131T0 Lonicera japonica HOM05D000092 ORTHO05D000042 2.4e-14 82.8 152 40.8
Lju124C46T9 Lonicera japonica HOM05D000092 ORTHO05D000042 5.4e-14 81.6 152 40.8
Lj1A1130G57 Lonicera japonica HOM05D000092 ORTHO05D000042 1.6e-13 80.1 151 42.4
Lj1C1130G13 Lonicera japonica HOM05D000092 ORTHO05D000042 1.3e-12 77.0 152 40.1
Lju124A45G66 Lonicera japonica HOM05D000092 ORTHO05D000042 2.3e-12 76.3 153 36.6
Dinv07579 Davidia involucrata HOM05D000092 ORTHO05D000042 8.7e-12 74.3 156 37.2
Dinv18667 Davidia involucrata HOM05D000092 ORTHO05D011915 8.7e-12 74.3 101 46.5
Lj5C773G9 Lonicera japonica HOM05D000092 ORTHO05D000042 1.1e-11 73.9 153 36.6
Lj3C13G13 Lonicera japonica HOM05D000092 ORTHO05D000042 1.9e-11 73.2 150 38.7
Lju124A47T118 Lonicera japonica HOM05D000092 ORTHO05D000042 2.5e-11 72.8 154 38.3
CSS0034659 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 9.6e-11 70.9 153 34.0
Lj5C775T1 Lonicera japonica HOM05D000092 ORTHO05D000042 9.6e-11 70.9 116 44.0
Lju124C45T0 Lonicera japonica HOM05D000092 ORTHO05D000042 2.1e-10 69.7 154 34.4
Lju124A44G40 Lonicera japonica HOM05D000092 ORTHO05D000042 2.8e-10 69.3 154 36.4
Potri.001G426430 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.7e-10 68.9 163 31.3
Dinv25002 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-09 67.4 157 36.3
CSS0049903 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.4e-09 66.2 153 32.7
CSS0050384 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.4e-09 66.2 149 34.2
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-09 66.2 153 37.9
Dinv25006 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-09 66.2 151 35.8
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-09 66.2 153 37.9
Dinv10922 Davidia involucrata HOM05D000092 ORTHO05D000042 6.9e-09 64.7 157 36.3
CSS0037245 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 9.0e-09 64.3 135 37.0
CSS0006875 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.2e-08 63.9 155 33.5
Dinv07591 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-08 63.9 156 32.1
Dinv25017 Davidia involucrata HOM05D000092 ORTHO05D000042 1.5e-08 63.5 150 38.0
COL.COLO4_13539 Corchorus olitorius HOM05D000092 ORTHO05D000042 2.0e-08 63.2 158 31.6
Gorai.007G356000 Gossypium raimondii HOM05D000092 ORTHO05D000042 2.0e-08 63.2 159 31.4
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.0e-08 63.2 146 34.2
Actinidia12451 Actinidia chinensis HOM05D000092 ORTHO05D000042 7.6e-08 61.2 150 32.0
Potri.001G447132 Populus trichocarpa HOM05D000092 ORTHO05D000042 9.9e-08 60.8 154 30.5
Ciclev10018190m.g Citrus clementina HOM05D000092 ORTHO05D000042 1.3e-07 60.5 161 33.5
COL.COLO4_13565 Corchorus olitorius HOM05D000092 ORTHO05D000042 2.2e-07 59.7 148 31.1
QL07p019306 Quercus lobata HOM05D000092 ORTHO05D000042 2.2e-07 59.7 168 35.1
Gohir.D11G325101 Gossypium hirsutum HOM05D000092 ORTHO05D000042 3.8e-07 58.9 156 30.1
Potri.001G419800 Populus trichocarpa HOM05D000092 ORTHO05D000042 4.9e-07 58.5 155 29.0
Cfa006505 Carpinus fangiana HOM05D000092 ORTHO05D000042 6.4e-07 58.2 149 33.6
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 6.4e-07 58.2 150 36.0
Ciclev10000066m.g Citrus clementina HOM05D000092 ORTHO05D000042 8.4e-07 57.8 150 29.3
Dinv02874 Davidia involucrata HOM05D000092 ORTHO05D000042 8.4e-07 57.8 152 34.9
VMungo1127G0461 Vigna mungo HOM05D000092 ORTHO05D000042 8.4e-07 57.8 156 28.8
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-06 57.4 156 36.5
Dinv22271 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-06 57.4 144 34.0
Potri.001G445150 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.1e-06 57.4 155 32.9
QL07p010874 Quercus lobata HOM05D000092 ORTHO05D000042 1.1e-06 57.4 171 32.7
Cc06_g19680 Coffea canephora HOM05D000092 ORTHO05D000042 1.4e-06 57.0 97 41.2
Gohir.D11G325200 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.4e-06 57.0 156 29.5
Lj5A808T13 Lonicera japonica HOM05D000092 ORTHO05D000042 1.4e-06 57.0 52 57.7
Duzib177G0743 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-06 56.6 155 30.3
Ciclev10004054m.g Citrus clementina HOM05D000092 ORTHO05D000042 2.4e-06 56.2 155 31.0
Potri.001G446016 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.4e-06 56.2 155 29.0
CSS0045612 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.2e-06 55.8 150 32.7
Potri.001G446650 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.2e-06 55.8 155 29.0
COL.COLO4_13570 Corchorus olitorius HOM05D000092 ORTHO05D000042 4.2e-06 55.5 138 36.2
CSS0029306 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 7.1e-06 54.7 152 32.2
Potri.001G420000 Populus trichocarpa HOM05D000092 ORTHO05D000042 7.1e-06 54.7 158 29.1
Potri.001G425500 Populus trichocarpa HOM05D000092 ORTHO05D000042 7.1e-06 54.7 107 33.6
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 7.1e-06 54.7 147 32.0
GSVIVG01021955001 Vitis vinifera HOM05D000092 ORTHO05D000042 7.1e-06 54.7 148 31.8
CSS0030965 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 9.3e-06 54.3 150 32.7
Cc00_g13150 Coffea canephora HOM05D000092 ORTHO05D000042 9.3e-06 54.3 157 30.6
Cc00_g25690 Coffea canephora HOM05D000092 ORTHO05D000042 9.3e-06 54.3 163 31.3
Potri.001G444000 Populus trichocarpa HOM05D000092 ORTHO05D000042 9.3e-06 54.3 99 37.4
Potri.001G444050 Populus trichocarpa HOM05D000092 ORTHO05D000042 9.3e-06 54.3 99 37.4
Thecc.05G296500 Theobroma cacao HOM05D000092 ORTHO05D000042 9.3e-06 54.3 99 38.4
TAR636G0695 Trochodendron aralioides HOM05D000092 ORTHO05D000042 9.3e-06 54.3 135 31.1


User provided reference genes

Program Settings