Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P703T14 Lonicera japonica HOM05D058646 ORTHO05D000039 1.0e-75 286.6 136 100.0
Lj5C693T2 Lonicera japonica HOM05D058646 ORTHO05D000039 5.6e-66 254.2 127 94.5
Lj1C674T2 Lonicera japonica HOM05D000007 ORTHO05D000039 3.3e-34 148.7 109 66.1
Lj1P664T31 Lonicera japonica HOM05D000007 ORTHO05D000039 7.1e-29 131.0 134 49.3
Lj1C674T3 Lonicera japonica HOM05D000007 ORTHO05D000039 5.7e-26 121.3 110 51.8
Lj1A671T54 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-23 113.2 114 51.8
Lj1A671T53 Lonicera japonica HOM05D000007 ORTHO05D000039 2.2e-22 109.4 114 50.9
Lj1P655T32 Lonicera japonica HOM05D000007 ORTHO05D000039 5.0e-22 108.2 117 48.7
Lj1P529T7 Lonicera japonica HOM05D000007 ORTHO05D000039 2.5e-21 105.9 133 42.1
Lj1P670T24 Lonicera japonica HOM05D000007 ORTHO05D000039 3.2e-21 105.5 113 47.8
Lj1P673T22 Lonicera japonica HOM05D000007 ORTHO05D000039 4.2e-21 105.1 113 48.7
Lj1C663T1 Lonicera japonica HOM05D000007 ORTHO05D000039 5.5e-21 104.8 114 45.6
Lj1C655T5 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-20 102.8 117 47.0
Lj1P673T32 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-20 102.8 116 44.8
Lj4C425G8 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-20 102.8 103 46.6
Lju225C0T9 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-20 102.4 118 48.3
Lju114C7G11 Lonicera japonica HOM05D000007 ORTHO05D000039 4.6e-20 101.7 117 47.9
Lj1C664T13 Lonicera japonica HOM05D000007 ORTHO05D000039 7.9e-20 100.9 117 46.2
Lj1P670T34 Lonicera japonica HOM05D000007 ORTHO05D000039 1.8e-19 99.8 116 44.0
Lj1P665T26 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-18 96.7 111 48.6
Lju225C3T2 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-18 96.3 132 40.9
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 9.7e-18 94.0 114 43.9
Lju114C6T5 Lonicera japonica HOM05D000007 ORTHO05D000039 9.7e-18 94.0 120 45.8
Lju1609C1G1 Lonicera japonica HOM05D000007 ORTHO05D000039 1.3e-17 93.6 118 44.9
Lj1P660T10 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-17 93.2 122 42.6
Lj1A530T29 Lonicera japonica HOM05D000007 ORTHO05D000039 2.2e-17 92.8 110 44.5
Lj1C674T7 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-16 90.5 132 42.4
Lj1P665T33 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-16 90.1 115 46.1
Lj1P664T40 Lonicera japonica HOM05D000007 ORTHO05D000039 2.4e-16 89.4 113 45.1
Lj1P591T21 Lonicera japonica HOM05D000007 ORTHO05D000039 3.1e-16 89.0 116 44.8
Lju1074C2T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-14 84.0 120 39.2
Lj1P662T13 Lonicera japonica HOM05D000007 ORTHO05D000039 1.3e-14 83.6 115 46.1
Lj8C445T0 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-14 82.4 114 39.5
Hma1.2p1_1797F.1_g302840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.5e-13 79.3 131 37.4
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 4.2e-13 78.6 117 41.9
Lju1220C4T12 Lonicera japonica HOM05D000007 ORTHO05D000039 4.2e-13 78.6 80 45.0
Lj1A662G33 Lonicera japonica HOM05D000007 ORTHO05D000039 7.2e-13 77.8 115 45.2
Lj1P671T17 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-12 77.0 74 48.6
Lj1P593T30 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-12 76.6 51 78.4
DCAR_019197 Daucus carota HOM05D000007 ORTHO05D000039 2.1e-12 76.3 117 39.3
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 2.1e-12 76.3 116 40.5
Lj1P660T24 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-12 76.3 115 45.2
Lj1C671T7 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-12 75.9 79 49.4
Lju1609P2T20 Lonicera japonica HOM05D000007 ORTHO05D000039 7.9e-12 74.3 71 52.1
Lj1P652T23 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-11 73.9 117 38.5
Lj1P593T21 Lonicera japonica HOM05D000007 ORTHO05D000039 3.0e-11 72.4 115 37.4
Lj2C804T5 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-10 70.1 92 40.2
Dinv41267 Davidia involucrata HOM05D000007 ORTHO05D000039 2.0e-10 69.7 112 37.5
Lj2C804T8 Lonicera japonica HOM05D000007 ORTHO05D000039 3.3e-10 68.9 93 39.8
Actinidia37850 Actinidia chinensis HOM05D000007 ORTHO05D000039 4.4e-10 68.6 117 35.0
Lju114P6T7 Lonicera japonica HOM05D000007 ORTHO05D000039 4.4e-10 68.6 71 50.7
Actinidia11170 Actinidia chinensis HOM05D000007 ORTHO05D000039 5.7e-10 68.2 119 36.1
vmacro06021 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.7e-09 66.6 116 33.6
Dinv19778 Davidia involucrata HOM05D000007 ORTHO05D000039 4.8e-09 65.1 117 35.9
Lj1P599T56 Lonicera japonica HOM05D000007 ORTHO05D000039 8.2e-09 64.3 101 41.6
CSS0048184 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 3.1e-08 62.4 120 35.0
vmacro09289 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 3.1e-08 62.4 116 39.7
Lj5P299T4 Lonicera japonica HOM05D000007 ORTHO05D000039 5.3e-08 61.6 109 36.7
vmacro22920 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 5.3e-08 61.6 116 38.8
Haze_10070 Corylus avellana HOM05D000007 ORTHO05D000039 7.0e-08 61.2 132 31.1
PGSC0003DMG402021671 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.1e-08 60.8 117 33.3
Haze_15767 Corylus avellana HOM05D000007 ORTHO05D000039 1.2e-07 60.5 85 40.0
Actinidia29354 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.5e-07 60.1 83 39.8
Ciclev10028466m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.5e-07 60.1 108 31.5
Lj1P663T44 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-07 60.1 97 34.0
Hma1.2p1_0178F.1_g078430 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.6e-07 59.3 121 33.1
Lj5P288T0 Lonicera japonica HOM05D000007 ORTHO05D000039 3.4e-07 58.9 92 38.0
Nitab4.5_0003693g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.9e-07 58.2 137 29.9
Haze_13248 Corylus avellana HOM05D000029 ORTHO05D001395 1.0e-06 57.4 94 35.1
Dinv42745 Davidia involucrata HOM05D000007 ORTHO05D000039 1.0e-06 57.4 92 33.7
Dinv43356 Davidia involucrata HOM05D000007 ORTHO05D000039 1.0e-06 57.4 92 33.7
PGSC0003DMG400021673 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.0e-06 57.4 117 30.8
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.3e-06 57.0 116 31.0
Haze_13301 Corylus avellana HOM05D000007 ORTHO05D000039 1.3e-06 57.0 116 33.6
Sopen10g004400 Solanum pennellii HOM05D000007 ORTHO05D000039 1.7e-06 56.6 117 31.6
Sed0011449 Sechium edule HOM05D000007 ORTHO05D000039 2.9e-06 55.8 96 35.4
Solyc10g008580.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.8e-06 55.5 117 29.9
Haze_13250 Corylus avellana HOM05D000007 ORTHO05D000039 6.5e-06 54.7 84 40.5
Nitab4.5_0007022g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.5e-06 54.3 101 32.7


User provided reference genes

Program Settings