Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P699T6 Lonicera japonica HOM05D000092 ORTHO05D018013 9.5e-56 219.9 110 100.0
Lj5P706T49 Lonicera japonica HOM05D000092 ORTHO05D018013 7.8e-42 173.7 110 78.2
Lj5C778T2 Lonicera japonica HOM05D000092 ORTHO05D000042 4.1e-35 151.4 110 70.9
Lj5C545T1 Lonicera japonica HOM05D000092 ORTHO05D000042 6.0e-34 147.5 110 71.8
Lj5P806T5 Lonicera japonica HOM05D000092 ORTHO05D018013 3.0e-33 145.2 110 69.1
Lj5C775T1 Lonicera japonica HOM05D000092 ORTHO05D000042 4.3e-32 141.4 110 69.1
Lj5C803T8 Lonicera japonica HOM05D000092 ORTHO05D000042 4.3e-32 141.4 110 70.0
Lj5C780T0 Lonicera japonica HOM05D000092 ORTHO05D000042 1.2e-31 139.8 110 70.0
Lj5P807T16 Lonicera japonica HOM05D000092 ORTHO05D018013 2.1e-31 139.0 102 67.6
Lj5A772G60 Lonicera japonica HOM05D000092 ORTHO05D000042 3.4e-29 131.7 106 67.9
Lj5A774G52 Lonicera japonica HOM05D000092 ORTHO05D000042 4.4e-29 131.3 106 68.9
Lj5C779T0 Lonicera japonica HOM05D000092 ORTHO05D000042 9.2e-27 123.6 83 77.1
Lj4C326T4 Lonicera japonica HOM05D000092 ORTHO05D000042 4.6e-26 121.3 111 60.4
Lj4C322T4 Lonicera japonica HOM05D000092 ORTHO05D000042 1.7e-25 119.4 111 59.5
Lj4A323T38 Lonicera japonica HOM05D000092 ORTHO05D000042 3.0e-25 118.6 111 58.6
Lj5P698T21 Lonicera japonica HOM05D000092 ORTHO05D018013 5.4e-19 97.8 52 86.5
Lj5A773T44 Lonicera japonica HOM05D046481 ORTHO05D018013 1.6e-18 96.3 95 54.7
Lj5C541T0 Lonicera japonica HOM05D000092 ORTHO05D000042 5.6e-16 87.8 94 56.4
Lj5P808T8 Lonicera japonica HOM05D000092 ORTHO05D018013 9.6e-16 87.0 80 66.2
Lj3C14T0 Lonicera japonica HOM05D000092 ORTHO05D000042 2.8e-15 85.5 106 41.5
Lj1A1130G57 Lonicera japonica HOM05D000092 ORTHO05D000042 5.2e-14 81.3 96 47.9
Lj3C13G13 Lonicera japonica HOM05D000092 ORTHO05D000042 9.0e-14 80.5 96 45.8
QL07p010874 Quercus lobata HOM05D000092 ORTHO05D000042 9.0e-14 80.5 96 45.8
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 2.0e-13 79.3 110 38.2
Dinv24998 Davidia involucrata HOM05D000092 ORTHO05D016246 2.6e-13 79.0 96 40.6
Lj5C707G1 Lonicera japonica HOM05D000092 ORTHO05D000042 2.6e-13 79.0 53 77.4
Lju124A47T120 Lonicera japonica HOM05D000092 ORTHO05D000042 2.6e-13 79.0 102 45.1
Lju124C44T15 Lonicera japonica HOM05D000092 ORTHO05D000042 2.6e-13 79.0 96 42.7
Dinv25008 Davidia involucrata HOM05D000092 ORTHO05D000042 7.6e-13 77.4 96 39.6
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 7.6e-13 77.4 92 39.1
Lj5C706G1 Lonicera japonica HOM05D000092 ORTHO05D000042 9.9e-13 77.0 98 46.9
Lju124A44G40 Lonicera japonica HOM05D000092 ORTHO05D000042 9.9e-13 77.0 96 41.7
QL07p010927 Quercus lobata HOM05D000092 ORTHO05D000042 1.7e-12 76.3 109 43.1
Dinv25005 Davidia involucrata HOM05D000092 ORTHO05D000042 2.2e-12 75.9 96 38.5
Lj5C773G9 Lonicera japonica HOM05D000092 ORTHO05D000042 3.8e-12 75.1 53 71.7
Cc00_g13170 Coffea canephora HOM05D000092 ORTHO05D000042 4.9e-12 74.7 95 46.3
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 8.4e-12 73.9 96 42.7
Lju124A47T119 Lonicera japonica HOM05D000092 ORTHO05D000042 8.4e-12 73.9 97 42.3
QL07p010547 Quercus lobata HOM05D000092 ORTHO05D000042 8.4e-12 73.9 96 40.6
CiPaw.14G091100 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.1e-11 73.6 110 36.4
CiPaw.16G011600 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.1e-11 73.6 92 39.1
Cc06_g19650 Coffea canephora HOM05D000092 ORTHO05D000042 1.1e-11 73.6 95 46.3
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-11 72.4 96 42.7
Dinv20774 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-11 72.0 92 41.3
CiPaw.13G113400 Carya illinoinensis HOM05D000092 ORTHO05D000042 5.4e-11 71.2 96 41.7
Oeu059341.1 Olea europaea HOM05D000092 ORTHO05D000042 5.4e-11 71.2 94 41.5
Lj1C1131T0 Lonicera japonica HOM05D000092 ORTHO05D000042 7.1e-11 70.9 127 37.0
QL07p010720 Quercus lobata HOM05D000092 ORTHO05D000042 9.3e-11 70.5 96 40.6
Actinidia38180 Actinidia chinensis HOM05D000092 ORTHO05D000042 1.2e-10 70.1 96 37.5
Lju124C46T9 Lonicera japonica HOM05D000092 ORTHO05D000042 1.2e-10 70.1 127 36.2
QL07p010572 Quercus lobata HOM05D000092 ORTHO05D000042 1.2e-10 70.1 96 39.6
CiPaw.14G090800 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.6e-10 68.2 93 35.5
QL07p010603 Quercus lobata HOM05D000092 ORTHO05D000042 4.6e-10 68.2 96 41.7
Lj2A406G37 Lonicera japonica HOM05D000092 ORTHO05D000042 6.0e-10 67.8 107 35.5
CiPaw.14G091300 Carya illinoinensis HOM05D000092 ORTHO05D000042 7.8e-10 67.4 93 36.6
Actinidia38183 Actinidia chinensis HOM05D000092 ORTHO05D000042 1.0e-09 67.0 96 36.5
Actinidia38188 Actinidia chinensis HOM05D000092 ORTHO05D000042 1.0e-09 67.0 96 38.5
Medtr7g088290 Medicago truncatula HOM05D000092 ORTHO05D000042 1.0e-09 67.0 93 33.3
Dinv02874 Davidia involucrata HOM05D000092 ORTHO05D000042 1.7e-09 66.2 91 39.6
Actinidia38186 Actinidia chinensis HOM05D000092 ORTHO05D000042 2.3e-09 65.9 94 38.3
CiPaw.16G058500 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.3e-09 65.9 96 36.5
CiPaw.16G058800 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.3e-09 65.9 96 36.5
Lj5A807T21 Lonicera japonica HOM05D000092 ORTHO05D018013 2.3e-09 65.9 73 57.5
Oeu054048.1 Olea europaea HOM05D000092 ORTHO05D000042 3.9e-09 65.1 110 33.6
QL07p010649 Quercus lobata HOM05D000092 ORTHO05D000042 3.9e-09 65.1 94 40.4
Lj1A1098G65 Lonicera japonica HOM05D000092 ORTHO05D000042 5.1e-09 64.7 96 34.4
CiPaw.16G058600 Carya illinoinensis HOM05D000092 ORTHO05D000042 6.6e-09 64.3 96 35.4
Oeu009026.1 Olea europaea HOM05D000092 ORTHO05D000042 6.6e-09 64.3 101 38.6
CiPaw.14G091200 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.1e-08 63.5 97 36.1
CiPaw.16G012100 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.1e-08 63.5 92 35.9
CiPaw.16G057100 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.1e-08 63.5 110 35.5
Dinv36125 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-08 63.5 96 36.5
CiPaw.16G056500 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.9e-08 62.8 92 35.9
QL07p019286 Quercus lobata HOM05D000092 ORTHO05D000042 1.9e-08 62.8 94 37.2
Oeu027648.2 Olea europaea HOM05D000092 ORTHO05D000042 2.5e-08 62.4 94 40.4
Oeu041352.1 Olea europaea HOM05D000092 ORTHO05D000042 2.5e-08 62.4 95 41.1
Rhsim07G0168300 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.5e-08 62.4 98 40.8
CiPaw.14G091000 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.3e-08 62.0 93 34.4
QL07p019306 Quercus lobata HOM05D000092 ORTHO05D000042 3.3e-08 62.0 93 34.4
CiPaw.16G069800 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.3e-08 61.6 92 33.7
CiPaw.16G011800 Carya illinoinensis HOM05D000092 ORTHO05D000042 5.6e-08 61.2 96 34.4
GSVIVG01030726001 Vitis vinifera HOM05D000092 ORTHO05D000042 5.6e-08 61.2 97 38.1
CiPaw.16G056700 Carya illinoinensis HOM05D000092 ORTHO05D000042 7.3e-08 60.8 96 36.5
Cc00_g22090 Coffea canephora HOM05D000092 ORTHO05D000042 7.3e-08 60.8 96 41.7
VMungo0464G1511 Vigna mungo HOM05D000092 ORTHO05D000042 7.3e-08 60.8 83 33.7
CiPaw.16G058200 Carya illinoinensis HOM05D000092 ORTHO05D000042 9.6e-08 60.5 95 35.8
Cc06_g19720 Coffea canephora HOM05D000092 ORTHO05D000042 9.6e-08 60.5 95 36.8
PGR035G0003 Punica granatum HOM05D000092 ORTHO05D000042 9.6e-08 60.5 96 32.3
CiPaw.16G058100 Carya illinoinensis HOM05D000368 ORTHO05D000289 1.3e-07 60.1 96 35.4
Cc06_g19740 Coffea canephora HOM05D000092 ORTHO05D000042 1.3e-07 60.1 95 36.8
Lj6P219T6 Lonicera japonica HOM05D000092 ORTHO05D000042 1.3e-07 60.1 96 34.4
Lj1P1085T29 Lonicera japonica HOM05D000092 ORTHO05D000042 1.6e-07 59.7 96 33.3
RhsimUnG0029200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.6e-07 59.7 99 36.4
Lj1A1098T75 Lonicera japonica HOM05D000092 ORTHO05D000042 2.1e-07 59.3 98 31.6
QL07p019170 Quercus lobata HOM05D000254 ORTHO05D000165 2.1e-07 59.3 80 36.2
arahy.Tifrunner.gnm1.ann1.IV9S0P Arachis hypogaea HOM05D000092 ORTHO05D000042 2.8e-07 58.9 92 31.5
Lj1A1096T56 Lonicera japonica HOM05D000092 ORTHO05D000042 2.8e-07 58.9 96 32.3
Manes.02G200600 Manihot esculenta HOM05D000092 ORTHO05D000042 2.8e-07 58.9 96 36.5
Manes.02G220750 Manihot esculenta HOM05D000092 ORTHO05D000042 2.8e-07 58.9 96 36.5
CSS0004521 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.6e-07 58.5 106 33.0
Oeu009134.1 Olea europaea HOM05D000092 ORTHO05D000042 3.6e-07 58.5 81 40.7
Oeu026311.1 Olea europaea HOM05D000092 ORTHO05D000042 4.8e-07 58.2 94 37.2
Rhsim04G0090800 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.8e-07 58.2 100 37.0
CSS0042157 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.2e-07 57.8 106 34.0
CSS0045676 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.2e-07 57.8 106 34.0
Prupe.2G027200 Prunus persica HOM05D000092 ORTHO05D000042 6.2e-07 57.8 93 37.6
Rhsim04G0090000 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.2e-07 57.8 99 35.4
CSS0018500 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 8.1e-07 57.4 94 35.1
Cc00_g13150 Coffea canephora HOM05D000092 ORTHO05D000042 8.1e-07 57.4 95 36.8
Dinv05367 Davidia involucrata HOM05D013973 ORTHO05D013263 8.1e-07 57.4 91 36.3
ECA247G1818 Erigeron canadensis HOM05D000092 ORTHO05D000042 8.1e-07 57.4 89 33.7
QL07p010511 Quercus lobata HOM05D000092 ORTHO05D000042 8.1e-07 57.4 59 45.8
arahy.Tifrunner.gnm1.ann1.WZ0QPG Arachis hypogaea HOM05D000092 ORTHO05D000042 1.1e-06 57.0 105 27.6
Lj5A806T26 Lonicera japonica HOM05D046481 ORTHO05D018013 1.1e-06 57.0 63 52.4
Lj6P195T10 Lonicera japonica HOM05D000092 ORTHO05D000042 1.1e-06 57.0 98 34.7
Manes.02G215615 Manihot esculenta HOM05D000092 ORTHO05D000042 1.1e-06 57.0 100 32.0
Rhsim04G0089800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.1e-06 57.0 99 36.4
arahy.Tifrunner.gnm1.ann1.NH27IJ Arachis hypogaea HOM05D000092 ORTHO05D000042 1.4e-06 56.6 106 28.3
Lj6P197T8 Lonicera japonica HOM05D000092 ORTHO05D000042 1.4e-06 56.6 98 33.7
CSS0004934 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.8e-06 56.2 106 32.1
CSS0030405 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.8e-06 56.2 106 34.9
Dinv04828 Davidia involucrata HOM05D000092 ORTHO05D000042 1.8e-06 56.2 86 36.0
Lj1A1096T58 Lonicera japonica HOM05D000092 ORTHO05D000042 1.8e-06 56.2 96 32.3
Medtr1g006975 Medicago truncatula HOM05D000092 ORTHO05D000042 1.8e-06 56.2 105 27.6
HanXRQChr14g0428811 Helianthus annuus HOM05D000092 ORTHO05D000042 2.4e-06 55.8 104 28.8
Rhsim04G0114500 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.4e-06 55.8 98 34.7
Lsat_1_v5_gn_0_37320 Lactuca sativa HOM05D000092 ORTHO05D000042 3.1e-06 55.5 101 27.7
Lj6P179T11 Lonicera japonica HOM05D000092 ORTHO05D000042 3.1e-06 55.5 98 34.7
Gohir.D11G325233 Gossypium hirsutum HOM05D000092 ORTHO05D000042 4.0e-06 55.1 78 35.9
TPR.G29461 Trifolium pratense HOM05D000092 ORTHO05D000042 4.0e-06 55.1 103 34.0
Lj6A224T23 Lonicera japonica HOM05D000092 ORTHO05D000042 5.3e-06 54.7 111 33.3
Atru.chr12.1821 Acer truncatum HOM05D000092 ORTHO05D000042 6.9e-06 54.3 109 29.4
Eucgr.G00715 Eucalyptus grandis HOM05D000092 ORTHO05D000042 6.9e-06 54.3 94 34.0
Lj6C157T5 Lonicera japonica HOM05D000092 ORTHO05D000042 6.9e-06 54.3 94 29.8
Manes.02G215445 Manihot esculenta HOM05D000092 ORTHO05D000042 6.9e-06 54.3 100 30.0
Manes.02G215700 Manihot esculenta HOM05D000092 ORTHO05D000042 6.9e-06 54.3 100 30.0
Rhsim04G0114200 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.9e-06 54.3 100 38.0
Lj1A1096G52 Lonicera japonica HOM05D000092 ORTHO05D000042 9.0e-06 53.9 86 32.6
Lj6A205T27 Lonicera japonica HOM05D000092 ORTHO05D000042 9.0e-06 53.9 111 31.5
Lj6C187G0 Lonicera japonica HOM05D000092 ORTHO05D000042 9.0e-06 53.9 108 32.4
Oeu038338.1 Olea europaea HOM05D000092 ORTHO05D000042 9.0e-06 53.9 95 35.8


User provided reference genes

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