Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P577T7 Lonicera japonica HOM05D000237 ORTHO05D235537 1.3e-60 236.1 116 100.0
Lj5A174G79 Lonicera japonica HOM05D000237 ORTHO05D010524 1.8e-33 146.0 94 79.8
Haze_02064 Corylus avellana HOM05D000237 ORTHO05D010524 1.7e-18 96.3 89 55.1
Dinv14144 Davidia involucrata HOM05D000237 ORTHO05D010524 1.8e-17 92.8 87 56.3
Oeu029659.1 Olea europaea HOM05D000237 ORTHO05D010524 2.4e-17 92.4 83 56.6
Aqoxy5G01072 Aquilegia oxysepala HOM05D000237 ORTHO05D010524 1.2e-16 90.1 84 56.0
CANSAT25G3717 Cannabis sativa HOM05D000237 ORTHO05D010524 1.6e-16 89.7 80 58.8
Cc09_g10460 Coffea canephora HOM05D000237 ORTHO05D010524 1.6e-16 89.7 81 59.3
Gohir.A12G035400 Gossypium hirsutum HOM05D000237 ORTHO05D010524 1.6e-16 89.7 80 55.0
Gorai.008G038400 Gossypium raimondii HOM05D000237 ORTHO05D010524 2.0e-16 89.4 80 53.8
MSTRG.16939 Avicennia marina HOM05D000237 ORTHO05D010524 3.5e-16 88.6 77 59.7
Gohir.D12G037300 Gossypium hirsutum HOM05D000237 ORTHO05D010524 4.5e-16 88.2 80 52.5
Sabra09G0109000 Salix brachista HOM05D000237 ORTHO05D010524 4.5e-16 88.2 73 64.4
Sabra09G0109200 Salix brachista HOM05D000237 ORTHO05D010524 4.5e-16 88.2 73 64.4
Duzib132G1114 Durio zibethinus HOM05D000237 ORTHO05D010524 7.7e-16 87.4 80 55.0
Hma1.2p1_0163F.1_g072880 Hydrangea macrophylla HOM05D000237 ORTHO05D010524 7.7e-16 87.4 77 58.4
vmacro17270 Vaccinium macrocarpon HOM05D000237 ORTHO05D010524 1.7e-15 86.3 82 51.2
Nn5g30888 Nelumbo nucifera HOM05D000237 ORTHO05D010524 2.2e-15 85.9 84 53.6
Nitab4.5_0003603g0150 Nicotiana tabacum HOM05D000237 ORTHO05D010524 2.2e-15 85.9 72 62.5
FvH4_2g15960 Fragaria vesca HOM05D000237 ORTHO05D010524 2.9e-15 85.5 76 56.6
Peaxi162Scf00362g00347 Petunia axillaris HOM05D000237 ORTHO05D010524 2.9e-15 85.5 82 53.7
Solyc01g111950.4 Solanum lycopersicum HOM05D000237 ORTHO05D010524 2.9e-15 85.5 72 59.7
Sopen01g054000 Solanum pennellii HOM05D000237 ORTHO05D010524 2.9e-15 85.5 72 59.7
CAN.G1235.31 Capsicum annuum HOM05D000237 ORTHO05D010524 3.8e-15 85.1 72 56.9
PGSC0003DMG403018633 Solanum tuberosum HOM05D000237 ORTHO05D010524 3.8e-15 85.1 72 58.3
Migut.B00037 Erythranthe guttata HOM05D000237 ORTHO05D010524 6.5e-15 84.3 61 67.2
FAN24G0612 Fragaria x ananassa HOM05D000237 ORTHO05D010524 8.5e-15 84.0 75 56.0
Lj9A402T70 Lonicera japonica HOM05D000237 ORTHO05D010524 1.1e-14 83.6 88 53.4
Potri.009G140300 Populus trichocarpa HOM05D000237 ORTHO05D010524 1.1e-14 83.6 73 60.3
FAN15G0446 Fragaria x ananassa HOM05D000237 ORTHO05D010524 1.9e-14 82.8 76 53.9
Actinidia24613 Actinidia chinensis HOM05D000237 ORTHO05D010524 2.5e-14 82.4 72 61.1
Rhsim05G0050200 Rhododendron simsii HOM05D000237 ORTHO05D010524 2.5e-14 82.4 70 55.7
Nitab4.5_0001506g0020 Nicotiana tabacum HOM05D000237 ORTHO05D010524 4.2e-14 81.6 72 58.3
Aqoxy6G01871 Aquilegia oxysepala HOM05D000237 ORTHO05D010524 9.4e-14 80.5 61 62.3
QL11p053300 Quercus lobata HOM05D000237 ORTHO05D010524 1.6e-13 79.7 73 56.2
Atru.chr5.3480 Acer truncatum HOM05D000237 ORTHO05D010524 2.7e-13 79.0 81 54.3
Sed0010154 Sechium edule HOM05D000237 ORTHO05D010524 2.7e-13 79.0 72 54.2
Ciclev10028131m.g Citrus clementina HOM05D000237 ORTHO05D010524 4.7e-13 78.2 76 47.4
FAN27G2981 Fragaria x ananassa HOM05D000237 ORTHO05D010524 6.1e-13 77.8 76 51.3
RcHm_v2.0_Chr6g0279501 Rosa chinensis HOM05D000237 ORTHO05D010524 8.0e-13 77.4 76 51.3
MD05G1128600 Malus domestica HOM05D000237 ORTHO05D010524 1.0e-12 77.0 72 58.3
TWI79G1020 Tripterygium wilfordii HOM05D000085 ORTHO05D010524 1.8e-12 76.3 61 60.7
CSS0030695 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D010524 2.3e-12 75.9 61 59.0
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 3.0e-12 75.5 86 47.7
GSVIVG01023899001 Vitis vinifera HOM05D000237 ORTHO05D010524 1.2e-11 73.6 84 50.0
Thecc.02G052200 Theobroma cacao HOM05D000237 ORTHO05D010524 4.4e-11 71.6 80 46.2
Sed0010030 Sechium edule HOM05D000237 ORTHO05D010524 1.3e-10 70.1 74 52.7
Prupe.8G172700 Prunus persica HOM05D000237 ORTHO05D010524 1.7e-10 69.7 75 52.0
ClCG02G003710 Citrullus lanatus HOM05D000237 ORTHO05D010524 3.7e-10 68.6 74 50.0
MELO3C013308.2 Cucumis melo HOM05D000237 ORTHO05D010524 3.7e-10 68.6 77 45.5
CsaV3_7G001420 Cucumis sativus L. HOM05D000237 ORTHO05D010524 1.4e-09 66.6 61 50.8
MBI08_g05395_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D010524 1.6e-08 63.2 76 44.7


User provided reference genes

Program Settings