Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P564T10 Lonicera japonica HOM05D012292 ORTHO05D012234 6.0e-202 707.2 336 100.0
Lj5C247T1 Lonicera japonica HOM05D031129 ORTHO05D012234 2.3e-60 236.9 325 43.1
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 2.9e-47 193.4 254 42.9
Lj5A250G20 Lonicera japonica HOM05D012292 ORTHO05D012234 1.4e-41 174.5 266 41.4
Lj5E258T0 Lonicera japonica HOM05D012292 ORTHO05D012234 6.7e-36 155.6 306 32.7
Lj5P684T14 Lonicera japonica HOM05D031129 ORTHO05D012234 2.3e-28 130.6 158 41.8
Lj5C264T6 Lonicera japonica HOM05D012292 ORTHO05D012234 5.1e-28 129.4 305 32.8
RcHm_v2.0_Chr2g0136121 Rosa chinensis HOM05D017060 ORTHO05D012234 5.1e-28 129.4 322 32.6
Lju3917C0T1 Lonicera japonica HOM05D012292 ORTHO05D012234 2.8e-26 123.6 302 31.5
Lj5C264T5 Lonicera japonica HOM05D012292 ORTHO05D012234 2.4e-25 120.6 302 31.5
Lj5P260T19 Lonicera japonica HOM05D012292 ORTHO05D012234 2.0e-24 117.5 298 30.9
Lj5C247T0 Lonicera japonica HOM05D031129 ORTHO05D012234 9.4e-22 108.6 274 31.8
Lj5A252G43 Lonicera japonica HOM05D012292 ORTHO05D012234 5.1e-20 102.8 240 32.9
Lju3917C0T2 Lonicera japonica HOM05D012292 ORTHO05D012234 5.1e-20 102.8 209 33.0
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 4.4e-19 99.8 298 29.2
FvH4_1g25891 Fragaria vesca HOM05D017060 ORTHO05D012234 4.4e-19 99.8 167 37.1
CSS0024213 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.3e-18 98.2 298 28.9
FAN15G2239 Fragaria x ananassa HOM05D017060 ORTHO05D012234 2.8e-18 97.1 207 33.3
Lj5A265T30 Lonicera japonica HOM05D012292 ORTHO05D012234 3.7e-18 96.7 250 28.4
Lj5E248T1 Lonicera japonica HOM05D031129 ORTHO05D012234 1.7e-15 87.8 68 55.9
CSS0027353 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 4.7e-13 79.7 251 27.1
Lj5C265T4 Lonicera japonica HOM05D012292 ORTHO05D012234 8.0e-13 79.0 192 31.2
CSS0010561 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 3.3e-11 73.6 277 26.7
Lj5P271T43 Lonicera japonica HOM05D012292 ORTHO05D012234 3.3e-11 73.6 148 35.8
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 1.1e-09 68.6 206 29.6
FvH4_1g24250 Fragaria vesca HOM05D017060 ORTHO05D046490 9.1e-09 65.5 80 43.8
CSS0012002 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 2.9e-07 60.5 190 27.9
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 2.9e-07 60.5 136 32.4
AUR62032965 Chenopodium quinoa HOM05D037678 ORTHO05D012136 1.5e-06 58.2 178 29.8
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 2.5e-06 57.4 194 29.4
FvH4_2g13411 Fragaria vesca HOM05D017060 ORTHO05D012234 3.2e-06 57.0 107 34.6
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 5.5e-06 56.2 181 30.4
PGR031G0854 Punica granatum HOM05D023452 ORTHO05D019051 7.2e-06 55.8 162 28.4
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 7.2e-06 55.8 184 29.3
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 9.4e-06 55.5 187 28.3


User provided reference genes

Program Settings