Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 9.5e-46 186.4 90 100.0
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 7.5e-43 176.8 90 96.7
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 5.2e-36 154.1 81 93.8
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 5.8e-35 150.6 90 81.1
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 4.6e-32 141.0 89 79.8
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.0e-31 139.8 90 76.7
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 1.5e-30 136.0 89 75.3
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.8e-28 129.0 89 74.2
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 5.2e-28 127.5 90 74.4
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.8e-28 127.1 89 69.7
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 8.9e-28 126.7 90 75.6
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.5e-27 125.9 90 70.0
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.5e-27 125.9 90 70.0
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.0e-27 125.6 89 73.0
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.0e-27 125.6 87 73.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.4e-27 124.4 87 72.4
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 4.4e-27 124.4 91 72.5
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 2.9e-26 121.7 90 71.1
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 3.7e-26 121.3 90 70.0
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 4.9e-26 120.9 89 67.4
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 6.4e-26 120.6 89 69.7
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.2e-24 116.3 90 67.8
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.6e-24 115.9 90 68.9
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 4.6e-24 114.4 89 64.0
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 3.0e-23 111.7 92 70.7
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 5.1e-23 110.9 88 65.9
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 5.1e-23 110.9 88 65.9
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 5.1e-23 110.9 74 75.7
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 8.6e-23 110.2 89 66.3
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.1e-22 109.8 88 64.8
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.1e-22 109.8 89 61.8
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 5.6e-22 107.5 92 66.3
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 7.3e-22 107.1 88 65.9
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.6e-21 105.9 91 60.4
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.6e-21 105.9 92 60.9
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 3.6e-21 104.8 89 62.9
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 3.6e-21 104.8 92 60.9
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 4.7e-21 104.4 85 62.4
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.1e-20 103.2 91 60.4
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 1.4e-20 102.8 73 67.1
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 1.4e-20 102.8 73 67.1
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.4e-20 102.8 89 58.4
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.1e-20 101.7 76 67.1
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 4.0e-20 101.3 89 62.9
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 4.0e-20 101.3 88 61.4
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 4.0e-20 101.3 96 62.5
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 4.0e-20 101.3 96 62.5
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 4.0e-20 101.3 89 58.4
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 4.0e-20 101.3 89 58.4
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 5.2e-20 100.9 87 63.2
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 8.9e-20 100.1 89 57.3
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.0e-19 99.0 94 62.8
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 2.6e-19 98.6 63 79.4
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 2.6e-19 98.6 90 63.3
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.3e-18 96.3 82 67.1
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.7e-18 95.9 91 61.5
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 2.2e-18 95.5 88 59.1
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 2.2e-18 95.5 89 59.6
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 2.2e-18 95.5 75 66.7
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 2.2e-18 95.5 79 63.3
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 4.9e-18 94.4 77 66.2
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.9e-18 94.4 77 66.2
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.9e-18 94.4 77 66.2
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 4.9e-18 94.4 75 68.0
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 4.9e-18 94.4 72 69.4
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.1e-17 93.2 88 61.4
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 1.1e-17 93.2 93 59.1
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.4e-17 92.8 89 58.4
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 1.9e-17 92.4 86 58.1
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.4e-17 92.0 77 64.9
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.2e-17 91.7 77 63.6
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 3.2e-17 91.7 88 58.0
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 5.4e-17 90.9 62 74.2
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 3.5e-16 88.2 87 60.9
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 1.7e-15 85.9 66 60.6
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.7e-15 85.9 62 67.7
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 5.1e-15 84.3 77 61.0
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 6.6e-15 84.0 71 56.3
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.9e-14 82.4 90 54.4
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 5.6e-14 80.9 87 47.1
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.2e-13 79.7 74 62.2
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 1.2e-13 79.7 86 50.0
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.6e-13 79.3 63 65.1
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 1.6e-13 79.3 85 55.3
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 8.1e-13 77.0 78 50.0
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 8.1e-13 77.0 78 50.0
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 6.9e-12 73.9 75 58.7
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.2e-11 73.2 58 58.6
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.5e-11 72.8 88 51.1
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.6e-11 72.0 67 58.2
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 4.4e-11 71.2 88 52.3
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 5.8e-11 70.9 72 56.9
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 7.6e-11 70.5 83 50.6
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 7.6e-11 70.5 58 55.2
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 1.3e-10 69.7 52 65.4
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 2.2e-10 68.9 58 56.9
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.7e-07 59.3 72 50.0
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 5.1e-07 57.8 65 46.2
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 5.1e-07 57.8 65 46.2
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.5e-06 56.2 51 54.9
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.5e-06 56.2 51 56.9
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 5.6e-06 54.3 65 46.2
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 5.6e-06 54.3 65 46.2


User provided reference genes

Program Settings