Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P369T32 Lonicera japonica HOM05D011311 ORTHO05D000009 7.4e-83 310.5 152 100.0
Lju3616C0T1 Lonicera japonica HOM05D011311 ORTHO05D000009 5.5e-78 294.3 152 94.1
Lj1P505T9 Lonicera japonica HOM05D011311 ORTHO05D000009 2.1e-77 292.4 152 93.4
Lj3P609T9 Lonicera japonica HOM05D011311 ORTHO05D000009 9.3e-70 266.9 152 86.8
Lj3P1011T16 Lonicera japonica HOM05D011311 ORTHO05D000009 9.4e-54 213.8 126 84.9
Lj2C73T8 Lonicera japonica HOM05D011311 ORTHO05D000009 7.7e-48 194.1 107 81.3
Lj8P480T12 Lonicera japonica HOM05D011311 ORTHO05D000009 9.4e-46 187.2 107 79.4
Lj5P277T26 Lonicera japonica HOM05D011311 ORTHO05D000009 2.3e-44 182.6 119 72.3
Lj8P188T26 Lonicera japonica HOM05D011311 ORTHO05D000009 5.2e-44 181.4 91 92.3
Lj8P416T18 Lonicera japonica HOM05D011311 ORTHO05D000009 1.5e-43 179.9 91 91.2
SGA_v2.0_scaffold2G01199 Striga asiatica HOM05D000030 ORTHO05D000009 1.5e-35 153.3 153 52.3
Lju170C7G1 Lonicera japonica HOM05D011311 ORTHO05D000009 4.4e-35 151.8 79 96.2
Lj2P100T19 Lonicera japonica HOM05D011311 ORTHO05D000009 1.7e-31 139.8 91 71.4
Lj7P526T73 Lonicera japonica HOM05D011311 ORTHO05D000009 4.0e-20 102.1 99 57.6
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 7.5e-19 97.8 152 39.5
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 1.5e-14 83.6 108 39.8
FvH4_2g26902 Fragaria vesca HOM05D000030 ORTHO05D000009 1.6e-13 80.1 102 41.2
FvH4_5g32181 Fragaria vesca HOM05D000030 ORTHO05D013601 2.1e-13 79.7 126 34.9
FvH4_4g10395 Fragaria vesca HOM05D000030 ORTHO05D000009 2.8e-13 79.3 131 34.4
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 3.6e-13 79.0 151 35.1
RcHm_v2.0_Chr3g0496331 Rosa chinensis HOM05D000030 ORTHO05D000009 6.1e-13 78.2 151 34.4
FvH4_4g16142 Fragaria vesca HOM05D000030 ORTHO05D000009 1.0e-12 77.4 106 37.7
FvH4_6g30963 Fragaria vesca HOM05D000030 ORTHO05D013601 1.8e-12 76.6 131 35.1
FAN12G0141 Fragaria x ananassa HOM05D000030 ORTHO05D013601 2.3e-12 76.3 122 34.4
FvH4_2g05022 Fragaria vesca HOM05D000030 ORTHO05D000009 4.0e-12 75.5 131 33.6
FvH4_c5g00011 Fragaria vesca HOM05D000030 ORTHO05D013601 4.0e-12 75.5 131 34.4
FAN07G0457 Fragaria x ananassa HOM05D011311 ORTHO05D000009 8.9e-12 74.3 83 45.8
FvH4_6g28381 Fragaria vesca HOM05D000030 ORTHO05D013601 1.2e-11 73.9 131 32.1
FAN19G0008 Fragaria x ananassa HOM05D000030 ORTHO05D013601 2.6e-11 72.8 121 35.5
FvH4_3g32841 Fragaria vesca HOM05D000030 ORTHO05D020648 5.7e-11 71.6 143 34.3
RcHm_v2.0_Chr7g0235391 Rosa chinensis HOM05D011311 ORTHO05D020648 5.7e-11 71.6 79 45.6
FvH4_6g32751 Fragaria vesca HOM05D000030 ORTHO05D020648 9.8e-11 70.9 143 33.6
FvH4_1g29581 Fragaria vesca HOM05D000030 ORTHO05D000031 1.3e-10 70.5 109 35.8
FvH4_1g17901 Fragaria vesca HOM05D000030 ORTHO05D000031 2.9e-10 69.3 109 35.8
FvH4_3g17731 Fragaria vesca HOM05D000030 ORTHO05D000031 6.4e-10 68.2 130 33.8
Hma1.2p1_0875F.1_g231530 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.3e-10 67.8 152 29.6
Hma1.2p1_0073F.1_g038490 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.0e-09 64.7 152 30.3
FAN11G2172 Fragaria x ananassa HOM05D000030 ORTHO05D013601 1.2e-08 63.9 109 33.9
Hma1.2p1_1597F.1_g292850 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.7e-08 62.8 152 28.3
FAN20G2390 Fragaria x ananassa HOM05D000030 ORTHO05D020648 1.0e-07 60.8 68 42.6
FvH4_4g07681 Fragaria vesca HOM05D000030 ORTHO05D013601 5.0e-07 58.5 80 37.5
FAN12G0238 Fragaria x ananassa HOM05D000030 ORTHO05D013601 6.6e-07 58.2 63 39.7
Hma1.2p1_0018F.1_g012300 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.6e-07 57.8 150 28.0
Hma1.2p1_0451F.1_g155750 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.6e-07 57.8 154 28.6
FAN11G3199 Fragaria x ananassa HOM05D000030 ORTHO05D013601 1.5e-06 57.0 104 32.7
RcHm_v2.0_Chr4g0391261 Rosa chinensis HOM05D000030 ORTHO05D000009 2.5e-06 56.2 76 38.2
FAN22G0310 Fragaria x ananassa HOM05D000030 ORTHO05D013601 7.3e-06 54.7 104 32.7
RcHm_v2.0_Chr2g0170381 Rosa chinensis HOM05D000030 ORTHO05D000009 7.3e-06 54.7 149 30.9


User provided reference genes

Program Settings