Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P366T9 Lonicera japonica HOM05D000101 ORTHO05D003282 3.1e-194 681.8 382 100.0
Lj5C359T4 Lonicera japonica HOM05D000101 ORTHO05D003282 2.1e-174 615.9 382 92.9
Lj5C367T1 Lonicera japonica HOM05D000101 ORTHO05D003282 7.3e-164 580.9 382 87.7
Lj5A361T45 Lonicera japonica HOM05D000101 ORTHO05D003282 2.8e-163 578.9 382 87.7
Lj5A368T45 Lonicera japonica HOM05D000101 ORTHO05D003282 2.8e-155 552.4 382 84.6
Lj5C363T1 Lonicera japonica HOM05D000101 ORTHO05D003282 5.1e-141 505.0 382 79.1
Lj5C375T0 Lonicera japonica HOM05D000101 ORTHO05D003282 9.4e-95 351.3 382 59.9
Lj5A364T42 Lonicera japonica HOM05D000101 ORTHO05D003282 8.6e-88 328.2 360 64.2
Lj5C364T5 Lonicera japonica HOM05D000101 ORTHO05D003282 9.8e-84 314.7 195 80.5
Lj5C362G2 Lonicera japonica HOM05D000101 ORTHO05D003282 2.5e-79 300.1 324 67.3
Lj5C304T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.1e-69 268.1 273 57.1
Lj5C293G2 Lonicera japonica HOM05D000101 ORTHO05D003282 3.1e-69 266.5 270 57.4
Lj5C275T1 Lonicera japonica HOM05D000101 ORTHO05D003282 7.6e-52 208.8 257 48.6
Lj5A582T23 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-51 208.0 256 47.7
Lj5C574T6 Lonicera japonica HOM05D000101 ORTHO05D003282 3.8e-51 206.5 257 47.9
Lj5P583T36 Lonicera japonica HOM05D000101 ORTHO05D003282 3.8e-51 206.5 257 47.9
Lj5C584T0 Lonicera japonica HOM05D000101 ORTHO05D003282 6.4e-51 205.7 256 47.3
Lj5C583T4 Lonicera japonica HOM05D000101 ORTHO05D003282 1.1e-50 204.9 257 47.9
Lj5P276T14 Lonicera japonica HOM05D000101 ORTHO05D003282 4.2e-50 203.0 257 47.5
Lj5C18T0 Lonicera japonica HOM05D000101 ORTHO05D003282 9.3e-50 201.8 257 46.7
Lj5P578T9 Lonicera japonica HOM05D000101 ORTHO05D003282 1.2e-49 201.4 257 47.5
Lj5C15T0 Lonicera japonica HOM05D000101 ORTHO05D003282 3.0e-48 196.8 257 45.9
Lj5C573T0 Lonicera japonica HOM05D000101 ORTHO05D003282 5.1e-48 196.1 257 46.7
Lj5C385T2 Lonicera japonica HOM05D000101 ORTHO05D003282 5.6e-47 192.6 223 52.5
Lj5C580T1 Lonicera japonica HOM05D000101 ORTHO05D003282 7.3e-47 192.2 257 44.7
Lj5C585G3 Lonicera japonica HOM05D000101 ORTHO05D003282 2.1e-46 190.7 257 44.4
Lj5A273T45 Lonicera japonica HOM05D000101 ORTHO05D003282 6.9e-45 185.7 264 43.2
Lj5P276T58 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-43 181.4 271 45.4
Lj5P278T58 Lonicera japonica HOM05D000101 ORTHO05D003282 1.7e-43 181.0 271 45.0
Lj5P602T19 Lonicera japonica HOM05D000101 ORTHO05D003282 5.4e-42 176.0 265 43.0
Lj5A271T96 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-40 171.4 264 43.9
Lj5C381T0 Lonicera japonica HOM05D000101 ORTHO05D003282 3.0e-40 170.2 383 43.9
Lj5P606T11 Lonicera japonica HOM05D000101 ORTHO05D003282 9.6e-39 165.2 215 47.0
Lj5C276T11 Lonicera japonica HOM05D000101 ORTHO05D003282 2.6e-36 157.1 264 42.0
Dinv29663 Davidia involucrata HOM05D000101 ORTHO05D003282 2.2e-35 154.1 289 34.6
Actinidia26187 Actinidia chinensis HOM05D000101 ORTHO05D003282 6.4e-35 152.5 286 35.3
CSS0015515 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 6.4e-35 152.5 294 34.4
Lj5C601T5 Lonicera japonica HOM05D000101 ORTHO05D003282 2.4e-34 150.6 263 40.7
Lj5C575G2 Lonicera japonica HOM05D000101 ORTHO05D003282 2.1e-33 147.5 244 40.2
RhsimUnG0074600 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.6e-33 146.4 289 34.9
Rhsim11G0119600 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.5e-31 141.4 277 35.0
Lj5C606T4 Lonicera japonica HOM05D000101 ORTHO05D003282 3.3e-31 140.2 229 41.9
RhsimUnG0074800 Rhododendron simsii HOM05D000101 ORTHO05D003282 3.3e-31 140.2 288 36.1
Actinidia38982 Actinidia chinensis HOM05D000101 ORTHO05D003282 4.3e-31 139.8 295 34.2
RhsimUnG0083100 Rhododendron simsii HOM05D000101 ORTHO05D003282 7.4e-31 139.0 287 35.5
Lj5C602G2 Lonicera japonica HOM05D000101 ORTHO05D003282 9.6e-31 138.7 200 44.0
Rhsim11G0120700 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.3e-30 138.3 288 34.4
RhsimUnG0074100 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.8e-30 137.1 293 34.1
Rhsim11G0120300 Rhododendron simsii HOM05D000101 ORTHO05D003282 3.7e-30 136.7 288 33.7
RhsimUnG0032200 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.8e-29 134.4 289 32.9
CSS0037676 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 9.0e-29 132.1 292 33.2
Dinv29665 Davidia involucrata HOM05D000101 ORTHO05D003282 2.6e-28 130.6 245 34.7
Rhsim11G0119400 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.6e-28 130.6 289 32.5
Rhsim11G0121000 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.6e-28 130.6 289 34.6
Rhsim11G0062300 Rhododendron simsii HOM05D000101 ORTHO05D003282 5.8e-28 129.4 282 34.0
Lj5C364G3 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-27 128.3 68 86.8
CSS0050315 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 3.8e-27 126.7 302 32.1
Rhsim11G0118800 Rhododendron simsii HOM05D000101 ORTHO05D003282 6.5e-27 125.9 288 30.9
TAR624G1018 Trochodendron aralioides HOM05D000101 ORTHO05D003282 8.4e-27 125.6 269 35.7
vmacro01689 Vaccinium macrocarpon HOM05D000101 ORTHO05D003282 8.4e-27 125.6 261 33.0
Actinidia38979 Actinidia chinensis HOM05D000101 ORTHO05D003282 2.1e-25 120.9 239 33.9
Lj5C274T1 Lonicera japonica HOM05D000101 ORTHO05D003282 3.5e-25 120.2 195 42.1
RhsimUnG0074400 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.6e-25 119.8 241 33.6
Lj5A14G12 Lonicera japonica HOM05D000101 ORTHO05D003282 6.0e-25 119.4 170 46.5
Lj5A574T36 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-24 118.2 236 37.3
RhsimUnG0032000 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.1e-23 115.2 413 26.2
Lsat_1_v5_gn_9_121401 Lactuca sativa HOM05D000101 ORTHO05D003282 2.5e-23 114.0 289 30.1
Duzib205G1449 Durio zibethinus HOM05D000101 ORTHO05D003282 3.3e-23 113.6 360 27.2
QL02p102345 Quercus lobata HOM05D000101 ORTHO05D003282 7.4e-23 112.5 267 31.8
QL02p102988 Quercus lobata HOM05D000101 ORTHO05D003282 9.6e-23 112.1 267 31.8
QL02p102261 Quercus lobata HOM05D000101 ORTHO05D003282 2.1e-22 110.9 267 32.6
Lj5P277T28 Lonicera japonica HOM05D000101 ORTHO05D003282 4.8e-22 109.8 174 42.0
QL02p102834 Quercus lobata HOM05D000101 ORTHO05D003282 4.8e-22 109.8 216 34.3
DCAR_001710 Daucus carota HOM05D000101 ORTHO05D003282 8.2e-22 109.0 277 28.9
QL02p102193 Quercus lobata HOM05D000101 ORTHO05D003282 8.2e-22 109.0 216 34.7
Glyma.08G123300 Glycine max HOM05D000101 ORTHO05D003282 1.4e-21 108.2 291 29.2
Lj5A570T22 Lonicera japonica HOM05D000101 ORTHO05D003282 6.9e-21 105.9 252 33.7
Cfa026050 Carpinus fangiana HOM05D000101 ORTHO05D003282 1.2e-20 105.1 245 32.2
Haze_10010 Corylus avellana HOM05D000101 ORTHO05D003282 1.2e-20 105.1 280 29.3
QL02p102904 Quercus lobata HOM05D000101 ORTHO05D003282 1.2e-20 105.1 267 31.5
Cfa026040 Carpinus fangiana HOM05D000101 ORTHO05D003282 1.5e-20 104.8 269 30.5
Eucgr.G00112 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.5e-20 104.8 336 27.4
Glyma.05G165600 Glycine max HOM05D000101 ORTHO05D003282 1.5e-20 104.8 292 29.8
Lj4g0017827 Lotus japonicus HOM05D000101 ORTHO05D003282 2.0e-20 104.4 300 31.3
arahy.Tifrunner.gnm1.ann1.8BMB32 Arachis hypogaea HOM05D000101 ORTHO05D003282 3.4e-20 103.6 281 29.9
VMungo0251G1948 Vigna mungo HOM05D000101 ORTHO05D003282 4.5e-20 103.2 270 29.6
Lj5C603T9 Lonicera japonica HOM05D000101 ORTHO05D003282 5.9e-20 102.8 180 39.4
Gohir.A07G057900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 7.6e-20 102.4 358 24.9
Gohir.D07G062700 Gossypium hirsutum HOM05D000101 ORTHO05D003282 7.6e-20 102.4 358 24.9
Rhsim11G0064400 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.0e-19 102.1 257 30.4
Gorai.001G066200 Gossypium raimondii HOM05D000101 ORTHO05D003282 1.3e-19 101.7 358 24.9
PGR042G3275 Punica granatum HOM05D000101 ORTHO05D003282 1.3e-19 101.7 268 29.1
Thecc.03G111000 Theobroma cacao HOM05D000101 ORTHO05D003282 1.7e-19 101.3 361 26.3
Thecc.02G013800 Theobroma cacao HOM05D000101 ORTHO05D003282 2.9e-19 100.5 341 27.3
Haze_10009 Corylus avellana HOM05D000101 ORTHO05D003282 3.8e-19 100.1 246 32.5
Eucgr.G00160 Eucalyptus grandis HOM05D000101 ORTHO05D003282 5.0e-19 99.8 290 28.6
GSVIVG01023207001 Vitis vinifera HOM05D000101 ORTHO05D003282 2.5e-18 97.4 333 27.9
vmacro01690 Vaccinium macrocarpon HOM05D000101 ORTHO05D003282 3.2e-18 97.1 275 30.9
GSVIVG01023210001 Vitis vinifera HOM05D000101 ORTHO05D003282 3.2e-18 97.1 222 32.0
Eucgr.G00249 Eucalyptus grandis HOM05D000101 ORTHO05D003282 9.3e-18 95.5 381 26.0
Eucgr.J02649 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.6e-17 94.7 381 25.7
Haze_10012 Corylus avellana HOM05D000101 ORTHO05D003282 2.1e-17 94.4 268 29.9
QL02p102693 Quercus lobata HOM05D000101 ORTHO05D003282 2.7e-17 94.0 265 29.1
Eucgr.G00087 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.3e-16 91.7 339 28.6
Ciclev10018762m.g Citrus clementina HOM05D000101 ORTHO05D003282 2.3e-16 90.9 240 28.3
PGR042G3596 Punica granatum HOM05D000101 ORTHO05D003282 3.0e-16 90.5 288 29.2
Thecc.02G013100 Theobroma cacao HOM05D000101 ORTHO05D003282 3.9e-16 90.1 277 28.5
COL.COLO4_28824 Corchorus olitorius HOM05D000101 ORTHO05D003282 1.1e-15 88.6 270 27.8
QL93p1902_0702 Quercus lobata HOM05D000101 ORTHO05D003282 7.4e-15 85.9 287 27.2
GSVIVG01023203001 Vitis vinifera HOM05D000101 ORTHO05D003282 7.4e-15 85.9 244 29.9
MBI12_g17628_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D003282 1.6e-14 84.7 307 23.8
Eucgr.L00913 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.2e-14 84.3 243 31.3
Gorai.006G231700 Gossypium raimondii HOM05D000101 ORTHO05D003282 2.2e-14 84.3 395 23.8
Nn1g09693 Nelumbo nucifera HOM05D000101 ORTHO05D003282 2.2e-14 84.3 249 30.1
Thecc.03G111300 Theobroma cacao HOM05D000101 ORTHO05D003282 2.2e-14 84.3 377 24.7
Eucgr.G00162 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.8e-14 84.0 245 29.0
COL.COLO4_08148 Corchorus olitorius HOM05D000101 ORTHO05D003282 4.8e-14 83.2 254 28.0
ECA234G1788 Erigeron canadensis HOM05D000101 ORTHO05D003282 8.2e-14 82.4 251 28.7
vmacro01688 Vaccinium macrocarpon HOM05D000606 ORTHO05D002559 8.2e-14 82.4 388 24.7
EL10Ac3g06069 Beta vulgaris HOM05D000101 ORTHO05D003282 6.9e-13 79.3 287 26.8
Gohir.D09G211900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 6.9e-13 79.3 292 25.3
QL10p054773 Quercus lobata HOM05D000101 ORTHO05D003282 6.9e-13 79.3 199 29.1
Eucgr.H05030 Eucalyptus grandis HOM05D000101 ORTHO05D003282 9.0e-13 79.0 246 28.0
QL93p1902_0371 Quercus lobata HOM05D000101 ORTHO05D003282 1.2e-12 78.6 291 25.8
RhsimUnG0201700 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.2e-12 78.6 143 33.6
Eucgr.L01865 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.0e-12 77.8 242 29.8
AUR62020946 Chenopodium quinoa HOM05D000101 ORTHO05D003282 2.6e-12 77.4 324 25.0
QL10p054822 Quercus lobata HOM05D000101 ORTHO05D003282 1.0e-11 75.5 196 29.1
Lj5P280T38 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-11 75.1 105 44.8
QL93p1902_0089 Quercus lobata HOM05D000101 ORTHO05D003282 1.3e-11 75.1 288 25.3
vmacro01695 Vaccinium macrocarpon HOM05D000046 ORTHO05D002559 1.3e-11 75.1 386 22.8
QL10p054757 Quercus lobata HOM05D000101 ORTHO05D003282 1.7e-11 74.7 161 32.9
Rhsim11G0062200 Rhododendron simsii HOM05D000101 ORTHO05D002559 2.2e-11 74.3 365 23.8
Eucgr.G00101 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.9e-11 73.9 261 26.1
Rhsim11G0064600 Rhododendron simsii HOM05D000101 ORTHO05D002559 2.9e-11 73.9 308 24.0
Lj5P272T8 Lonicera japonica HOM05D000101 ORTHO05D002559 3.8e-11 73.6 282 23.0
Thecc.02G013700 Theobroma cacao HOM05D000101 ORTHO05D002559 3.8e-11 73.6 384 22.9
Ciclev10018458m.g Citrus clementina HOM05D000005 ORTHO05D002559 6.5e-11 72.8 370 24.9
Cc00_g17360 Coffea canephora HOM05D000101 ORTHO05D003282 8.5e-11 72.4 277 25.3
Gohir.A09G213600 Gossypium hirsutum HOM05D000101 ORTHO05D003282 8.5e-11 72.4 248 25.4
Ah.13g077580 Amaranthus hybridus HOM05D000101 ORTHO05D003282 1.9e-10 71.2 293 26.6
AUR62018477 Chenopodium quinoa HOM05D000101 ORTHO05D003282 1.9e-10 71.2 251 26.3
Gohir.A10G194800 Gossypium hirsutum HOM05D000101 ORTHO05D002559 4.2e-10 70.1 292 27.7
Rhsim11G0119500 Rhododendron simsii HOM05D000046 ORTHO05D002559 4.2e-10 70.1 383 22.2
RhsimUnG0032300 Rhododendron simsii HOM05D000046 ORTHO05D002559 4.2e-10 70.1 383 22.2
AUR62020945 Chenopodium quinoa HOM05D000101 ORTHO05D002559 7.2e-10 69.3 394 22.6
Eucgr.G00154 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.2e-09 68.6 189 30.2
Ciclev10023911m.g Citrus clementina HOM05D000101 ORTHO05D002559 1.6e-09 68.2 258 26.7
Duzib151G0424 Durio zibethinus HOM05D000101 ORTHO05D003282 2.7e-09 67.4 236 22.5
Eucgr.G00248 Eucalyptus grandis HOM05D000101 ORTHO05D003282 4.6e-09 66.6 126 32.5
AUR62018478 Chenopodium quinoa HOM05D000101 ORTHO05D002559 6.1e-09 66.2 398 23.1
Lj5A279T40 Lonicera japonica HOM05D000101 ORTHO05D003282 6.1e-09 66.2 53 54.7
vmacro01694 Vaccinium macrocarpon HOM05D000009 ORTHO05D002559 6.1e-09 66.2 359 23.1
Thecc.02G013200 Theobroma cacao HOM05D000101 ORTHO05D002559 7.9e-09 65.9 324 23.5
CSS0049217 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D002559 1.0e-08 65.5 381 22.0
Ah.07g202660 Amaranthus hybridus HOM05D000101 ORTHO05D003282 1.4e-08 65.1 323 21.1
Duzib151G0116 Durio zibethinus HOM05D000101 ORTHO05D002559 1.4e-08 65.1 236 22.0
Lj5A278T75 Lonicera japonica HOM05D000101 ORTHO05D003282 3.9e-08 63.5 56 51.8
Rhsim10G0148700 Rhododendron simsii HOM05D000101 ORTHO05D002559 6.7e-08 62.8 383 20.9
MBI18_g30506_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.5e-07 61.6 230 27.4
Nn1g09704 Nelumbo nucifera HOM05D000101 ORTHO05D000089 1.5e-07 61.6 207 24.2
Gohir.D11G290800 Gossypium hirsutum HOM05D000092 ORTHO05D000089 2.5e-07 60.8 200 26.5
TAR624G0061 Trochodendron aralioides HOM05D000101 ORTHO05D002559 2.5e-07 60.8 397 21.7
Atru.chr4.1399 Acer truncatum HOM05D000101 ORTHO05D002559 5.7e-07 59.7 232 25.4
Eucgr.G00259 Eucalyptus grandis HOM05D000101 ORTHO05D002559 5.7e-07 59.7 267 25.1
Lj5P576T16 Lonicera japonica HOM05D000101 ORTHO05D003282 5.7e-07 59.7 53 50.9
MBI04_g42209_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000042 5.7e-07 59.7 123 32.5
ATR1120G102 Amborella trichopoda HOM05D000101 ORTHO05D017265 9.7e-07 58.9 55 41.8
MBI01_g16592_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 9.7e-07 58.9 337 21.7
QL10p054740 Quercus lobata HOM05D000101 ORTHO05D003282 9.7e-07 58.9 173 27.2
AT4G19050 Arabidopsis thaliana HOM05D003506 ORTHO05D004063 2.2e-06 57.8 164 28.7
Migut.H02356 Erythranthe guttata HOM05D000101 ORTHO05D003282 2.2e-06 57.8 237 23.2
Eucgr.G00250 Eucalyptus grandis HOM05D000101 ORTHO05D002559 2.2e-06 57.8 267 24.7
MBI05_g05724_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 2.2e-06 57.8 221 24.4
Hund21506 Selenicereus undatus HOM05D000092 ORTHO05D015437 2.8e-06 57.4 137 28.5
Hund21508 Selenicereus undatus HOM05D000092 ORTHO05D015437 2.8e-06 57.4 132 31.1
Hund31065 Selenicereus undatus HOM05D000092 ORTHO05D015437 2.8e-06 57.4 132 31.1
Thecc.07G054600 Theobroma cacao HOM05D000092 ORTHO05D000089 3.7e-06 57.0 57 40.4
CANSAT56G2852 Cannabis sativa HOM05D003506 ORTHO05D004063 6.3e-06 56.2 129 29.5
Nn1g09664 Nelumbo nucifera HOM05D000101 ORTHO05D000089 8.2e-06 55.8 178 25.3
TAR243G0002 Trochodendron aralioides HOM05D000092 ORTHO05D000042 8.2e-06 55.8 250 23.2


User provided reference genes

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