Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P327T15 Lonicera japonica HOM05D008582 ORTHO05D010200 9.0e-113 410.2 201 100.0
Lj5C326G8 Lonicera japonica HOM05D008582 ORTHO05D010200 9.2e-49 197.6 208 57.2
Lj5C326G5 Lonicera japonica HOM05D008582 ORTHO05D010200 7.3e-46 188.0 222 51.8
Lj5C326T9 Lonicera japonica HOM05D008582 ORTHO05D010200 6.2e-45 184.9 241 48.5
Lj5P326T20 Lonicera japonica HOM05D008582 ORTHO05D010200 8.3e-34 147.9 141 57.4
Actinidia01501 Actinidia chinensis HOM05D008582 ORTHO05D010200 1.4e-28 130.6 210 42.4
QL03p015351 Quercus lobata HOM05D008582 ORTHO05D010200 1.5e-19 100.5 226 31.9
Rhsim05G0128000 Rhododendron simsii HOM05D008582 ORTHO05D010200 2.6e-19 99.8 205 33.2
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 3.8e-18 95.9 225 31.1
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 1.6e-16 90.5 197 35.0
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 3.5e-16 89.4 198 33.8
FvH4_6g07631 Fragaria vesca HOM05D008582 ORTHO05D010200 7.8e-16 88.2 215 35.8
QL03p015220 Quercus lobata HOM05D008582 ORTHO05D010200 7.8e-16 88.2 219 31.5
FvH4_6g07633 Fragaria vesca HOM05D008582 ORTHO05D010200 1.0e-15 87.8 226 33.2
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 1.0e-15 87.8 203 32.5
FAN14G5961 Fragaria x ananassa HOM05D008582 ORTHO05D010200 1.3e-15 87.4 216 36.1
Lj5A326T50 Lonicera japonica HOM05D008582 ORTHO05D010200 6.6e-15 85.1 159 40.9
QL03p015030 Quercus lobata HOM05D008582 ORTHO05D010200 1.9e-14 83.6 195 33.8
AUR62006733 Chenopodium quinoa HOM05D019907 ORTHO05D010200 4.3e-14 82.4 211 34.6
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 5.6e-14 82.0 248 28.2
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 1.6e-13 80.5 197 34.0
EL10Ac4g09475 Beta vulgaris HOM05D029458 ORTHO05D010200 3.6e-13 79.3 216 33.8
CANSAT54G1821 Cannabis sativa HOM05D008582 ORTHO05D010200 1.1e-12 77.8 210 32.4
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 3.1e-12 76.3 197 33.5
EL10Ac4g09476 Beta vulgaris HOM05D029458 ORTHO05D010200 5.3e-12 75.5 213 30.5
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 5.3e-12 75.5 196 31.6
FAN05G2556 Fragaria x ananassa HOM05D008582 ORTHO05D010200 5.3e-12 75.5 210 32.9
FAN14G3048 Fragaria x ananassa HOM05D008582 ORTHO05D010200 6.9e-12 75.1 210 31.0
FAN14G0417 Fragaria x ananassa HOM05D008582 ORTHO05D010200 9.0e-12 74.7 214 32.2
CAN.G220.19 Capsicum annuum HOM05D000886 ORTHO05D000525 1.5e-11 73.9 202 29.2
EL10Ac4g09478 Beta vulgaris HOM05D029458 ORTHO05D004309 2.6e-11 73.2 213 31.0
CAN.G220.20 Capsicum annuum HOM05D000886 ORTHO05D000525 4.5e-11 72.4 202 30.2
Atru.chr2.336 Acer truncatum HOM05D011415 ORTHO05D010200 2.2e-10 70.1 204 33.3
CAN.G220.15 Capsicum annuum HOM05D000886 ORTHO05D000525 2.2e-10 70.1 205 29.8
CAN.G220.21 Capsicum annuum HOM05D000886 ORTHO05D000525 3.8e-10 69.3 187 29.9
Zm00001eb157800 Zea mays HOM05D000886 ORTHO05D000525 8.4e-10 68.2 203 28.1
Dinv24474 Davidia involucrata HOM05D008582 ORTHO05D010200 1.1e-09 67.8 196 27.6
QL03p015309 Quercus lobata HOM05D008582 ORTHO05D010200 5.4e-09 65.5 156 33.3
Ah.06g196130 Amaranthus hybridus HOM05D019907 ORTHO05D010200 7.1e-09 65.1 198 29.3
FvH4_5g11671 Fragaria vesca HOM05D008582 ORTHO05D010200 9.3e-09 64.7 179 33.5
Lalb_Chr01g0016721 Lupinus albus HOM05D000886 ORTHO05D000525 2.7e-08 63.2 204 27.5
SGA_v2.0_scaffold240G44131 Striga asiatica HOM05D000886 ORTHO05D000525 2.7e-08 63.2 204 31.4
Sabra13G0045300 Salix brachista HOM05D000886 ORTHO05D000525 3.5e-08 62.8 138 32.6
Ah.06g196120 Amaranthus hybridus HOM05D019907 ORTHO05D010200 4.6e-08 62.4 220 26.8
Atru.chr1.1145 Acer truncatum HOM05D000886 ORTHO05D000525 6.0e-08 62.0 199 27.1
Rhsim05G0127800 Rhododendron simsii HOM05D008582 ORTHO05D010200 7.9e-08 61.6 104 35.6
Phvul.008G111200 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 1.0e-07 61.2 199 29.1
VMungo0647G0937 Vigna mungo HOM05D000886 ORTHO05D000525 1.0e-07 61.2 199 28.1
Aqoxy7G03742 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 1.3e-07 60.8 151 31.8
ECA232G0102 Erigeron canadensis HOM05D000886 ORTHO05D000525 3.0e-07 59.7 160 30.0
PSO063G4532 Papaver somniferum HOM05D000886 ORTHO05D000525 3.0e-07 59.7 220 26.4
COL.COLO4_12937 Corchorus olitorius HOM05D008582 ORTHO05D010200 3.9e-07 59.3 198 28.8
Os01g0660500 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 3.9e-07 59.3 199 26.1
Psat3g135480 Pisum sativum HOM05D000886 ORTHO05D000525 3.9e-07 59.3 176 26.1
SalBow6G4799 Salvia bowleyana HOM05D000886 ORTHO05D000525 5.1e-07 58.9 201 27.4
Actinidia17919 Actinidia chinensis HOM05D000886 ORTHO05D000525 6.7e-07 58.5 143 31.5
Ciclev10012747m.g Citrus clementina HOM05D000886 ORTHO05D000525 6.7e-07 58.5 165 32.1
PSO782G0468 Papaver somniferum HOM05D000886 ORTHO05D000525 6.7e-07 58.5 188 28.7
Peaxi162Scf00102g00087 Petunia axillaris HOM05D000886 ORTHO05D000525 8.7e-07 58.2 171 30.4
TPR.G33857 Trifolium pratense HOM05D000886 ORTHO05D000525 1.1e-06 57.8 199 28.1
Aqoxy2G02678 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 1.5e-06 57.4 174 27.0
PGSC0003DMG400043401 Solanum tuberosum HOM05D000886 ORTHO05D000525 1.5e-06 57.4 166 28.3
Lj1g0026528 Lotus japonicus HOM05D000886 ORTHO05D000525 2.5e-06 56.6 197 28.4
SHI23918 Sapria himalayana HOM05D008427 ORTHO05D000525 2.5e-06 56.6 149 32.2
MD14G1051900 Malus domestica HOM05D000886 ORTHO05D000525 3.3e-06 56.2 164 31.1
GSVIVG01025807001 Vitis vinifera HOM05D000886 ORTHO05D000525 3.3e-06 56.2 188 27.1
Lj6g0001850 Lotus japonicus HOM05D000886 ORTHO05D000525 4.3e-06 55.8 137 34.3
QL07p013665 Quercus lobata HOM05D000886 ORTHO05D000525 4.3e-06 55.8 163 31.3
PSO761G0004 Papaver somniferum HOM05D000886 ORTHO05D000525 5.6e-06 55.5 189 26.5
VMungo0464G0812 Vigna mungo HOM05D000886 ORTHO05D000525 5.6e-06 55.5 165 27.9
Solyc10g078200.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 7.4e-06 55.1 164 27.4
Thecc.01G321600 Theobroma cacao HOM05D007899 ORTHO05D010282 7.4e-06 55.1 177 25.4
Lj3g0008510 Lotus japonicus HOM05D000886 ORTHO05D000525 9.6e-06 54.7 161 30.4


User provided reference genes

Program Settings