Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P277T28 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-137 493.0 242 100.0
Lj5P278T58 Lonicera japonica HOM05D000101 ORTHO05D003282 4.1e-112 408.3 243 86.0
Lj5P276T58 Lonicera japonica HOM05D000101 ORTHO05D003282 5.6e-109 397.9 243 84.4
Lj5C276T11 Lonicera japonica HOM05D000101 ORTHO05D003282 1.1e-91 340.5 242 74.4
Lj5P280T35 Lonicera japonica HOM05D000101 ORTHO05D003282 5.6e-85 318.2 192 84.4
Lj5C606T4 Lonicera japonica HOM05D000101 ORTHO05D003282 1.5e-77 293.5 244 63.5
Lj5P602T19 Lonicera japonica HOM05D000101 ORTHO05D003282 1.5e-77 293.5 244 63.5
Lj5C602G2 Lonicera japonica HOM05D000101 ORTHO05D003282 6.9e-75 284.6 244 62.3
Lj5A271T96 Lonicera japonica HOM05D000101 ORTHO05D003282 1.0e-70 270.8 244 60.2
Lj5A273T45 Lonicera japonica HOM05D000101 ORTHO05D003282 1.5e-61 240.4 247 56.3
Lj5C601T5 Lonicera japonica HOM05D000101 ORTHO05D003282 1.0e-57 227.6 246 54.1
Lj5C275T1 Lonicera japonica HOM05D000101 ORTHO05D003282 1.6e-55 220.3 246 53.3
Lj5C580T1 Lonicera japonica HOM05D000101 ORTHO05D003282 1.5e-53 213.8 235 52.3
Lj5C583T4 Lonicera japonica HOM05D000101 ORTHO05D003282 1.5e-53 213.8 231 55.0
Lj5C585G3 Lonicera japonica HOM05D000101 ORTHO05D003282 4.3e-53 212.2 235 51.9
Lj5A278T75 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-52 210.7 171 66.1
Lj5C18T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.6e-52 210.3 228 52.2
Lj5C574T6 Lonicera japonica HOM05D000101 ORTHO05D003282 6.3e-52 208.4 235 53.2
Lj5C573T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.4e-51 207.2 238 52.5
Lj5A582T23 Lonicera japonica HOM05D000101 ORTHO05D003282 1.8e-51 206.8 231 52.8
Lj5C584T0 Lonicera japonica HOM05D000101 ORTHO05D003282 6.9e-51 204.9 231 52.4
Lj5C15T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.2e-47 194.1 235 51.1
Lj5A14G12 Lonicera japonica HOM05D000101 ORTHO05D003282 2.7e-47 193.0 228 53.1
Lj5C293G2 Lonicera japonica HOM05D000101 ORTHO05D003282 2.8e-44 183.0 231 47.2
RhsimUnG0032000 Rhododendron simsii HOM05D000101 ORTHO05D003282 9.1e-43 177.9 252 42.1
Lj5C304T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-41 174.1 231 44.6
CSS0015515 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 2.2e-41 173.3 250 44.8
Rhsim11G0118800 Rhododendron simsii HOM05D000101 ORTHO05D003282 8.5e-41 171.4 234 42.3
RhsimUnG0032200 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.5e-40 169.9 229 44.1
Rhsim11G0119400 Rhododendron simsii HOM05D000101 ORTHO05D003282 5.5e-40 168.7 229 43.7
Lj5P606T11 Lonicera japonica HOM05D000101 ORTHO05D003282 1.2e-39 167.5 115 71.3
Lj5P276T14 Lonicera japonica HOM05D000101 ORTHO05D003282 1.0e-38 164.5 178 52.2
RhsimUnG0074400 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.4e-38 164.1 228 42.5
Actinidia38982 Actinidia chinensis HOM05D000101 ORTHO05D003282 2.6e-37 159.8 226 42.9
CSS0050315 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 2.6e-37 159.8 249 39.4
vmacro01689 Vaccinium macrocarpon HOM05D000101 ORTHO05D003282 3.3e-37 159.5 231 42.0
Lj5P583T36 Lonicera japonica HOM05D000101 ORTHO05D003282 1.7e-36 157.1 169 53.8
Lj5P578T9 Lonicera japonica HOM05D000101 ORTHO05D003282 8.2e-36 154.8 169 53.8
Lj5C375T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.2e-34 151.0 233 41.2
Lj5C364T5 Lonicera japonica HOM05D000101 ORTHO05D003282 5.9e-34 148.7 241 41.1
Lj5A361T45 Lonicera japonica HOM05D000101 ORTHO05D003282 7.7e-34 148.3 241 41.9
Lj5C367T1 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-33 147.5 252 39.3
Lj5C575G2 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-33 147.5 202 46.5
Lj5C363T1 Lonicera japonica HOM05D000101 ORTHO05D003282 2.5e-32 143.3 242 40.5
Actinidia38979 Actinidia chinensis HOM05D000101 ORTHO05D003282 9.4e-32 141.4 248 36.3
CSS0037676 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 1.2e-31 141.0 248 36.7
Dinv29663 Davidia involucrata HOM05D000101 ORTHO05D003282 2.1e-31 140.2 222 37.8
Lj5A368T45 Lonicera japonica HOM05D000101 ORTHO05D003282 2.7e-31 139.8 244 41.4
Dinv29665 Davidia involucrata HOM05D000101 ORTHO05D003282 8.0e-31 138.3 255 36.1
Lj5C359T4 Lonicera japonica HOM05D000101 ORTHO05D003282 1.0e-30 137.9 244 41.4
Lj5A574T36 Lonicera japonica HOM05D000101 ORTHO05D003282 2.3e-30 136.7 158 51.3
RhsimUnG0074800 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.0e-30 136.0 239 37.7
RhsimUnG0083100 Rhododendron simsii HOM05D000101 ORTHO05D003282 8.8e-30 134.8 248 35.9
Actinidia26187 Actinidia chinensis HOM05D000101 ORTHO05D003282 2.0e-29 133.7 245 37.1
Rhsim11G0120300 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.0e-29 133.7 229 37.1
Lj5C274T1 Lonicera japonica HOM05D000101 ORTHO05D003282 5.7e-29 132.1 245 38.4
Rhsim11G0119600 Rhododendron simsii HOM05D000101 ORTHO05D003282 5.7e-29 132.1 242 36.8
Lj5C385T2 Lonicera japonica HOM05D000101 ORTHO05D003282 9.7e-29 131.3 240 37.5
Rhsim11G0120700 Rhododendron simsii HOM05D000101 ORTHO05D003282 9.7e-29 131.3 229 36.7
HanXRQChr03g0065841 Helianthus annuus HOM05D000101 ORTHO05D003282 2.8e-28 129.8 245 37.6
Rhsim11G0062300 Rhododendron simsii HOM05D000101 ORTHO05D003282 6.3e-28 128.6 247 37.7
ECA234G1788 Erigeron canadensis HOM05D000101 ORTHO05D003282 1.1e-27 127.9 238 37.0
Rhsim11G0064400 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.2e-26 124.4 244 38.1
RhsimUnG0074100 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.5e-26 122.5 250 35.6
Lsat_1_v5_gn_9_121401 Lactuca sativa HOM05D000101 ORTHO05D003282 2.9e-25 119.8 242 34.7
vmacro01690 Vaccinium macrocarpon HOM05D000101 ORTHO05D003282 1.5e-24 117.5 227 35.2
RhsimUnG0074600 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.1e-23 113.6 232 33.6
Rhsim11G0121000 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.8e-22 110.5 234 34.6
Thecc.03G111300 Theobroma cacao HOM05D000101 ORTHO05D003282 1.8e-22 110.5 253 34.8
Lj5P366T9 Lonicera japonica HOM05D000101 ORTHO05D003282 4.0e-22 109.4 174 42.0
COL.COLO4_28824 Corchorus olitorius HOM05D000101 ORTHO05D003282 1.2e-21 107.8 253 34.4
Cfa026050 Carpinus fangiana HOM05D000101 ORTHO05D003282 2.6e-21 106.7 232 33.6
Thecc.03G111000 Theobroma cacao HOM05D000101 ORTHO05D003282 3.4e-21 106.3 253 33.6
Lj5A570T22 Lonicera japonica HOM05D000101 ORTHO05D003282 5.7e-21 105.5 209 35.9
QL02p102904 Quercus lobata HOM05D000101 ORTHO05D003282 5.7e-21 105.5 251 32.7
Duzib205G1449 Durio zibethinus HOM05D000101 ORTHO05D003282 9.8e-21 104.8 257 34.6
DCAR_001710 Daucus carota HOM05D000101 ORTHO05D003282 1.7e-20 104.0 242 29.8
QL02p102261 Quercus lobata HOM05D000101 ORTHO05D003282 3.7e-20 102.8 251 32.7
Cfa026040 Carpinus fangiana HOM05D000101 ORTHO05D003282 6.3e-20 102.1 233 32.6
Gohir.A07G057900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 6.3e-20 102.1 252 32.5
Gorai.001G066200 Gossypium raimondii HOM05D000101 ORTHO05D003282 1.1e-19 101.3 252 32.5
Haze_10012 Corylus avellana HOM05D000101 ORTHO05D003282 1.4e-19 100.9 235 32.3
Gohir.D07G062700 Gossypium hirsutum HOM05D000101 ORTHO05D003282 1.4e-19 100.9 252 32.5
Eucgr.L00913 Eucalyptus grandis HOM05D000101 ORTHO05D003282 4.1e-19 99.4 234 31.2
Eucgr.H05030 Eucalyptus grandis HOM05D000101 ORTHO05D003282 9.1e-19 98.2 225 32.0
Eucgr.G00112 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.7e-18 96.7 224 31.7
TAR624G1018 Trochodendron aralioides HOM05D000101 ORTHO05D003282 2.7e-18 96.7 206 33.5
QL02p102693 Quercus lobata HOM05D000101 ORTHO05D003282 4.5e-18 95.9 249 30.5
Thecc.02G013100 Theobroma cacao HOM05D000101 ORTHO05D003282 4.5e-18 95.9 259 32.4
Thecc.02G013300 Theobroma cacao HOM05D000101 ORTHO05D003282 5.9e-18 95.5 258 32.9
Lj5C603T9 Lonicera japonica HOM05D000101 ORTHO05D003282 1.7e-17 94.0 199 37.2
Thecc.02G013800 Theobroma cacao HOM05D000101 ORTHO05D003282 1.7e-17 94.0 257 32.7
Eucgr.G00087 Eucalyptus grandis HOM05D000101 ORTHO05D003282 6.5e-17 92.0 225 31.1
Eucgr.J02649 Eucalyptus grandis HOM05D000101 ORTHO05D003282 6.5e-17 92.0 205 34.6
Eucgr.G00249 Eucalyptus grandis HOM05D000101 ORTHO05D003282 8.5e-17 91.7 205 34.6
Eucgr.L01865 Eucalyptus grandis HOM05D000101 ORTHO05D003282 8.5e-17 91.7 231 29.9
PGR042G3596 Punica granatum HOM05D000101 ORTHO05D003282 8.5e-17 91.7 208 36.5
QL02p102345 Quercus lobata HOM05D000101 ORTHO05D003282 4.2e-16 89.4 234 31.6
Eucgr.G00162 Eucalyptus grandis HOM05D000101 ORTHO05D003282 5.5e-16 89.0 230 31.3
VMungo0251G1948 Vigna mungo HOM05D000101 ORTHO05D003282 5.5e-16 89.0 251 32.3
arahy.Tifrunner.gnm1.ann1.EZ6YKV Arachis hypogaea HOM05D000101 ORTHO05D003282 2.1e-15 87.0 252 30.2
Glyma.08G123300 Glycine max HOM05D000101 ORTHO05D003282 2.1e-15 87.0 260 29.6
arahy.Tifrunner.gnm1.ann1.L44J93 Arachis hypogaea HOM05D000101 ORTHO05D003282 2.7e-15 86.7 252 30.2
arahy.Tifrunner.gnm1.ann1.8BMB32 Arachis hypogaea HOM05D000101 ORTHO05D003282 3.6e-15 86.3 252 29.0
PGR042G3275 Punica granatum HOM05D000101 ORTHO05D003282 4.7e-15 85.9 231 30.7
QL02p102193 Quercus lobata HOM05D000101 ORTHO05D003282 4.7e-15 85.9 233 30.5
QL02p102834 Quercus lobata HOM05D000101 ORTHO05D003282 4.7e-15 85.9 233 30.0
QL02p102988 Quercus lobata HOM05D000101 ORTHO05D003282 4.7e-15 85.9 229 31.4
Lju1295A1G15 Lonicera japonica HOM05D000101 ORTHO05D003282 6.1e-15 85.5 96 52.1
Glyma.05G165600 Glycine max HOM05D000101 ORTHO05D003282 8.0e-15 85.1 260 30.0
Lj5A364T42 Lonicera japonica HOM05D000101 ORTHO05D003282 1.0e-14 84.7 168 36.3
Haze_10010 Corylus avellana HOM05D000101 ORTHO05D003282 3.0e-14 83.2 257 30.7
Eucgr.G00160 Eucalyptus grandis HOM05D000101 ORTHO05D003282 3.0e-14 83.2 206 29.1
Lj5C381T0 Lonicera japonica HOM05D000101 ORTHO05D003282 8.8e-14 81.6 235 30.2
Haze_10009 Corylus avellana HOM05D000101 ORTHO05D003282 1.2e-13 81.3 117 41.9
Lj4g0017827 Lotus japonicus HOM05D000101 ORTHO05D003282 3.4e-13 79.7 210 31.9
Eucgr.G00154 Eucalyptus grandis HOM05D000101 ORTHO05D003282 5.7e-13 79.0 199 28.6
GSVIVG01023207001 Vitis vinifera HOM05D000101 ORTHO05D003282 5.7e-13 79.0 241 29.5
Eucgr.G00101 Eucalyptus grandis HOM05D000101 ORTHO05D003282 7.5e-13 78.6 231 30.3
RhsimUnG0201700 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.3e-12 77.8 214 29.0
Lj5C362G2 Lonicera japonica HOM05D000101 ORTHO05D003282 3.7e-12 76.3 238 29.8
Hund03195 Selenicereus undatus HOM05D000101 ORTHO05D003282 8.3e-12 75.1 205 29.8
Rhsim11G0120100 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.8e-11 73.9 161 33.5
Ciclev10018699m.g Citrus clementina HOM05D000101 ORTHO05D003282 2.4e-11 73.6 209 26.3
Eucgr.J02654 Eucalyptus grandis HOM05D000101 ORTHO05D002559 2.7e-10 70.1 220 25.9
Eucgr.G00259 Eucalyptus grandis HOM05D000101 ORTHO05D002559 3.5e-10 69.7 264 24.2
Gorai.006G231700 Gossypium raimondii HOM05D000101 ORTHO05D003282 3.5e-10 69.7 214 27.6
Ah.13g077580 Amaranthus hybridus HOM05D000101 ORTHO05D003282 5.9e-10 68.9 211 28.0
AUR62018477 Chenopodium quinoa HOM05D000101 ORTHO05D003282 7.7e-10 68.6 213 27.2
QL93p1902_0177 Quercus lobata HOM05D000005 ORTHO05D002559 7.7e-10 68.6 248 28.2
Migut.H02356 Erythranthe guttata HOM05D000101 ORTHO05D003282 1.7e-09 67.4 261 26.8
AUR62020946 Chenopodium quinoa HOM05D000101 ORTHO05D003282 2.3e-09 67.0 214 27.1
Eucgr.J02658 Eucalyptus grandis HOM05D000101 ORTHO05D002559 2.9e-09 66.6 220 26.8
Ciclev10018762m.g Citrus clementina HOM05D000101 ORTHO05D003282 3.8e-09 66.2 214 27.6
Eucgr.G00267 Eucalyptus grandis HOM05D000101 ORTHO05D002559 3.8e-09 66.2 248 25.4
Gohir.A09G213600 Gossypium hirsutum HOM05D000101 ORTHO05D003282 3.8e-09 66.2 215 26.0
Duzib151G0598 Durio zibethinus HOM05D000101 ORTHO05D003282 8.6e-09 65.1 211 25.6
Eucgr.G00252 Eucalyptus grandis HOM05D000101 ORTHO05D002559 8.6e-09 65.1 232 25.0
Prupe.8G011900 Prunus persica HOM05D000101 ORTHO05D003282 1.5e-08 64.3 215 26.0
Gohir.D09G211900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 3.3e-08 63.2 215 25.6
Actinidia12729 Actinidia chinensis HOM05D000101 ORTHO05D003282 1.6e-07 60.8 165 30.3
Actinidia38981 Actinidia chinensis HOM05D000101 ORTHO05D003282 4.7e-07 59.3 97 40.2
Manes.10G111300 Manihot esculenta HOM05D000101 ORTHO05D003282 4.7e-07 59.3 243 21.4
Nn1g09693 Nelumbo nucifera HOM05D000101 ORTHO05D003282 4.7e-07 59.3 204 27.5
SalBow3G3484 Salvia bowleyana HOM05D000101 ORTHO05D003282 8.0e-07 58.5 238 25.6
HanXRQChr05g0159071 Helianthus annuus HOM05D000101 ORTHO05D003282 1.4e-06 57.8 250 27.6
Hund03192 Selenicereus undatus HOM05D000101 ORTHO05D003282 1.8e-06 57.4 200 26.0
SalBow3G3349 Salvia bowleyana HOM05D049742 ORTHO05D002559 3.0e-06 56.6 145 27.6
Lj5C281T0 Lonicera japonica HOM05D000101 ORTHO05D002559 4.0e-06 56.2 249 26.1
QL10p054773 Quercus lobata HOM05D000101 ORTHO05D003282 4.0e-06 56.2 246 27.2


User provided reference genes

Program Settings