Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P258T10 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-44 182.6 89 100.0
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 9.1e-25 116.7 80 73.8
Lj2P1210T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.0e-24 115.5 89 67.4
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 2.0e-24 115.5 80 70.0
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 5.9e-24 114.0 89 65.2
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-23 113.2 89 65.2
Lj2C893T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-23 112.8 80 67.5
Lj9P465T64 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-23 112.5 89 62.9
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 2.2e-23 112.1 89 62.9
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 8.5e-23 110.2 80 66.2
Lj7P342T47 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-22 108.2 89 61.8
Lj9P461T43 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-21 105.5 79 68.4
Lj4P611T23 Lonicera japonica HOM05D008126 ORTHO05D000309 3.6e-21 104.8 89 60.7
Lj2P828T8 Lonicera japonica HOM05D008126 ORTHO05D000309 8.0e-21 103.6 89 61.8
Lj1P817T17 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-20 103.2 89 57.3
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-20 103.2 89 58.4
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-20 102.4 89 57.3
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-20 102.4 80 61.2
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-20 102.4 80 61.2
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 5.2e-20 100.9 80 58.8
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 6.8e-20 100.5 89 57.3
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 8.8e-20 100.1 80 60.0
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 8.8e-20 100.1 80 60.0
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-19 98.6 80 58.8
Lj2P1035T33 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-19 97.8 80 57.5
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-19 97.8 80 57.5
Lj8P14T13 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-19 97.8 89 57.3
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-19 97.8 89 56.2
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 7.5e-19 97.1 80 57.5
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 9.8e-19 96.7 80 56.2
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 9.8e-19 96.7 90 54.4
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-18 96.3 80 61.2
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-18 95.9 89 55.1
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 8.3e-18 93.6 80 55.0
Lj1P842T49 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-17 92.8 89 51.7
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-17 92.8 89 52.8
Lj5P369T29 Lonicera japonica HOM05D008126 ORTHO05D000309 3.1e-17 91.7 80 56.2
Lj6P361T6 Lonicera japonica HOM05D008126 ORTHO05D000309 9.1e-17 90.1 55 72.7
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-16 89.7 80 58.8
Lj2P438T31 Lonicera japonica HOM05D008126 ORTHO05D000309 2.0e-16 89.0 89 50.6
Lj9P530T13 Lonicera japonica HOM05D008126 ORTHO05D000309 2.0e-16 89.0 80 52.5
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-16 88.6 80 57.5
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-16 88.6 89 56.2
Lj8P617T6 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-16 88.2 64 60.9
Lj2P661T3 Lonicera japonica HOM05D008126 ORTHO05D000309 4.5e-16 87.8 67 58.2
Lj4P899T22 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-15 85.5 74 52.7
Lj2P359T36 Lonicera japonica HOM05D008126 ORTHO05D000309 5.0e-15 84.3 88 53.4
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-14 83.2 84 47.6
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-14 83.2 62 58.1
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-13 79.0 75 49.3
Lj3P1030T42 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-12 76.6 78 46.2
Lj7P267T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-12 76.6 75 46.7
Lj1P1225T25 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-12 75.5 74 47.3
Lj5P17T12 Lonicera japonica HOM05D008126 ORTHO05D000309 5.2e-12 74.3 62 53.2
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 2.8e-10 68.6 84 39.3
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 7.0e-09 63.9 75 48.0
Ah.04g159280 Amaranthus hybridus HOM05D008388 ORTHO05D000309 2.3e-07 58.9 64 48.4
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.9e-07 58.5 55 52.7
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.6e-07 57.4 55 54.5
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.6e-07 57.0 73 42.5
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 8.6e-07 57.0 49 46.9
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 1.1e-06 56.6 64 46.9
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 1.5e-06 56.2 43 44.2
Aqoxy7G02008 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 2.5e-06 55.5 57 47.4
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 2.5e-06 55.5 61 37.7
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 2.5e-06 55.5 61 37.7
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-06 55.1 68 44.1
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-06 55.1 68 44.1
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.3e-06 55.1 55 52.7
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 3.3e-06 55.1 55 41.8
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 3.3e-06 55.1 55 41.8
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 3.3e-06 55.1 43 46.5
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 4.3e-06 54.7 49 46.9
Nitab4.5_0003547g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.3e-06 54.7 50 48.0
Peaxi162Scf01216g00039 Petunia axillaris HOM05D004040 ORTHO05D000309 4.3e-06 54.7 69 40.6
Ah.01g011000 Amaranthus hybridus HOM05D008388 ORTHO05D000309 5.6e-06 54.3 64 45.3
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 5.6e-06 54.3 69 34.8
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.3e-06 53.9 73 41.1
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 9.5e-06 53.5 86 41.9
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 9.5e-06 53.5 67 41.8
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 9.5e-06 53.5 67 41.8
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.5e-06 53.5 60 48.3
Nitab4.5_0000173g0260 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.5e-06 53.5 59 42.4
Nitab4.5_0008808g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.5e-06 53.5 50 46.0


User provided reference genes

Program Settings