Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.4e-61 239.6 135 100.0
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 5.4e-53 211.1 135 88.1
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 9.2e-53 210.3 131 87.8
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.2e-52 209.9 131 87.8
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.6e-52 209.5 135 85.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.6e-52 209.5 131 87.8
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.0e-52 209.1 135 86.7
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 2.7e-52 208.8 135 88.1
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.7e-52 208.8 131 86.3
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 2.7e-52 208.8 129 89.1
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 3.5e-52 208.4 131 87.0
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.0e-51 206.8 131 87.0
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.3e-51 206.5 134 85.8
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.3e-51 206.5 133 86.5
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-51 206.5 135 85.2
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-51 206.5 135 85.2
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.7e-51 206.1 136 86.0
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 1.7e-51 206.1 134 85.8
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.3e-51 205.7 135 84.4
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 3.9e-51 204.9 135 85.2
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 6.6e-51 204.1 135 85.2
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 1.1e-50 203.4 131 84.7
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 1.1e-50 203.4 131 86.3
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.9e-50 202.6 135 83.7
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.9e-50 202.6 131 86.3
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 2.5e-50 202.2 135 83.7
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 4.3e-50 201.4 133 84.2
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 7.3e-50 200.7 129 87.6
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 9.5e-50 200.3 152 77.0
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 1.2e-49 199.9 131 84.0
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.6e-49 199.5 131 83.2
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 2.1e-49 199.1 132 84.1
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 2.8e-49 198.7 137 83.2
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 3.6e-49 198.4 131 84.0
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 3.6e-49 198.4 131 84.0
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 4.7e-49 198.0 126 85.7
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 8.1e-49 197.2 135 80.7
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.4e-48 196.4 131 81.7
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.4e-48 196.4 132 81.8
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.4e-48 196.4 128 83.6
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 3.1e-48 195.3 131 81.7
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 3.1e-48 195.3 128 83.6
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 3.1e-48 195.3 131 84.0
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 4.0e-48 194.9 134 79.9
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 4.0e-48 194.9 134 79.9
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 4.0e-48 194.9 134 79.9
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 6.8e-48 194.1 134 78.4
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 6.8e-48 194.1 127 84.3
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 8.9e-48 193.7 134 82.1
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 1.2e-47 193.4 127 84.3
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.5e-47 193.0 135 80.0
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 2.0e-47 192.6 129 82.9
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 2.6e-47 192.2 134 78.4
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.6e-47 192.2 133 82.0
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 2.6e-47 192.2 128 82.8
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 2.6e-47 192.2 131 83.2
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 3.4e-47 191.8 134 78.4
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 4.4e-47 191.4 134 78.4
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 5.8e-47 191.0 134 78.4
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 5.8e-47 191.0 136 78.7
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 7.5e-47 190.7 134 76.9
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 7.5e-47 190.7 134 78.4
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 7.5e-47 190.7 134 78.4
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 1.3e-46 189.9 128 81.2
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 1.3e-46 189.9 134 79.1
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 1.3e-46 189.9 134 77.6
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 1.7e-46 189.5 134 77.6
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 2.9e-46 188.7 127 82.7
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 4.9e-46 188.0 129 80.6
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 4.9e-46 188.0 129 80.6
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 8.3e-46 187.2 131 78.6
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.1e-45 186.8 127 81.9
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.1e-45 186.8 127 81.9
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 3.2e-45 185.3 131 78.6
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 5.4e-45 184.5 131 78.6
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 7.1e-45 184.1 134 80.6
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 6.0e-44 181.0 135 75.6
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 7.8e-44 180.6 131 75.6
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.0e-43 180.3 128 77.3
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 2.3e-43 179.1 131 76.3
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 2.3e-43 179.1 135 74.8
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 3.9e-43 178.3 135 77.8
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.1e-42 176.8 131 74.8
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.5e-42 175.6 131 74.0
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 1.1e-40 170.2 128 71.9
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 4.0e-40 168.3 126 73.0
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 6.8e-40 167.5 125 72.8
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.5e-39 166.4 135 73.3
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 9.9e-39 163.7 131 71.0
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 2.9e-38 162.2 128 75.0
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 3.2e-37 158.7 134 67.2
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 2.1e-36 156.0 129 72.9
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 2.1e-36 156.0 131 69.5
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 3.0e-35 152.1 198 51.0
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 2.5e-34 149.1 127 71.7
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 5.6e-34 147.9 133 66.9
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.6e-33 145.2 128 68.8
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.5e-31 139.8 92 87.0
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 5.8e-31 137.9 91 86.8
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 5.8e-31 137.9 131 65.6
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 2.2e-30 136.0 106 75.5
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.9e-30 134.8 122 64.8
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 2.4e-29 132.5 124 57.3
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 2.7e-28 129.0 131 59.5
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 6.0e-28 127.9 124 54.8
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.3e-27 126.7 130 63.1
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.3e-27 125.9 131 61.1
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 3.9e-27 125.2 93 75.3
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 8.7e-27 124.0 92 75.0
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 1.5e-26 123.2 90 81.1
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 7.3e-26 120.9 131 58.8
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 6.2e-25 117.9 90 76.7
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 8.1e-25 117.5 120 52.5
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.4e-24 115.9 81 81.5
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.1e-24 115.5 156 51.3
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 9.9e-23 110.5 92 67.4
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 2.9e-22 109.0 106 60.4
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.8e-22 108.6 131 55.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 7.1e-21 104.4 135 53.3
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 7.9e-20 100.9 126 53.2
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.3e-19 99.4 131 51.9
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 2.3e-19 99.4 131 51.9
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 4.8e-17 91.7 65 75.4
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.3e-11 73.6 128 43.0
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 8.7e-11 70.9 124 42.7
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 4.8e-09 65.1 42 76.2
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 6.9e-08 61.2 38 84.2
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 1.7e-06 56.6 42 69.0


User provided reference genes

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