Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P172T81 Lonicera japonica HOM05D003937 ORTHO05D004583 2.7e-106 388.7 193 100.0
Dinv41880 Davidia involucrata HOM05D001927 ORTHO05D001972 1.7e-47 193.4 190 55.3
CSS0036568 Camellia sinensis var. sinensis HOM05D003937 ORTHO05D004583 2.4e-46 189.5 190 52.6
Dinv14164 Davidia involucrata HOM05D001927 ORTHO05D001972 2.0e-40 169.9 193 51.3
Hma1.2p1_0271F.1_g108900 Hydrangea macrophylla HOM05D003937 ORTHO05D004583 5.5e-35 151.8 195 47.2
Cfa005351 Carpinus fangiana HOM05D003937 ORTHO05D004583 2.1e-34 149.8 192 46.9
Rhsim05G0047600 Rhododendron simsii HOM05D003937 ORTHO05D004583 4.0e-33 145.6 190 48.4
Haze_02016 Corylus avellana HOM05D003937 ORTHO05D004583 2.6e-32 142.9 192 46.4
TAR625G1504 Trochodendron aralioides HOM05D003937 ORTHO05D004583 6.3e-31 138.3 191 44.5
Gohir.D01G166000 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.4e-30 137.1 191 46.1
Gorai.002G206500 Gossypium raimondii HOM05D003937 ORTHO05D004583 1.4e-30 137.1 191 46.1
Gohir.A01G174900 Gossypium hirsutum HOM05D003937 ORTHO05D004583 2.4e-30 136.3 191 46.1
Gohir.A03G209600 Gossypium hirsutum HOM05D003937 ORTHO05D004583 4.1e-30 135.6 193 47.2
Actinidia32012 Actinidia chinensis HOM05D003937 ORTHO05D004583 1.2e-29 134.0 197 44.2
Gorai.005G258900 Gossypium raimondii HOM05D003937 ORTHO05D004583 1.2e-29 134.0 193 46.6
Manes.04G067300 Manihot esculenta HOM05D003937 ORTHO05D004583 1.2e-29 134.0 193 43.0
Gohir.D02G231300 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.6e-29 133.7 193 46.6
Phvul.006G042500 Phaseolus vulgaris HOM05D003937 ORTHO05D004583 1.6e-29 133.7 193 45.1
Thecc.02G044800 Theobroma cacao HOM05D003937 ORTHO05D004583 4.6e-29 132.1 192 45.3
TWI75G1612 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 5.9e-29 131.7 190 43.7
Glyma.04G000700 Glycine max HOM05D003937 ORTHO05D004583 1.0e-28 131.0 198 42.9
Duzib052G0838 Durio zibethinus HOM05D003937 ORTHO05D004583 1.7e-28 130.2 191 45.5
Glyma.06G000500 Glycine max HOM05D003937 ORTHO05D004583 2.9e-28 129.4 198 43.4
Duzib132G1231 Durio zibethinus HOM05D003937 ORTHO05D004583 3.9e-28 129.0 192 45.3
Atru.chr5.3549 Acer truncatum HOM05D003937 ORTHO05D004583 5.0e-28 128.6 193 44.0
Lj1g0000413 Lotus japonicus HOM05D003937 ORTHO05D004583 9.5e-27 124.4 178 44.9
CiPaw.05G091700 Carya illinoinensis HOM05D003937 ORTHO05D004583 1.6e-26 123.6 191 41.4
Medtr3g118500 Medicago truncatula HOM05D003937 ORTHO05D004583 2.8e-26 122.9 192 41.7
Ciclev10028873m.g Citrus clementina HOM05D003937 ORTHO05D004583 6.1e-26 121.7 192 44.3
Nitab4.5_0011212g0050 Nicotiana tabacum HOM05D003937 ORTHO05D004583 6.1e-26 121.7 188 39.4
Nitab4.5_0000783g0190 Nicotiana tabacum HOM05D003937 ORTHO05D004583 2.3e-25 119.8 188 39.4
TPR.G38537 Trifolium pratense HOM05D003937 ORTHO05D004583 2.3e-25 119.8 193 43.0
Ca_16692_v3 Cicer arietinum L. HOM05D003937 ORTHO05D004583 4.0e-25 119.0 194 43.8
COL.COLO4_17933 Corchorus olitorius HOM05D003937 ORTHO05D004583 6.8e-25 118.2 182 44.0
TWI79G1491 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 8.9e-25 117.9 186 40.3
VMungo0540G0354 Vigna mungo HOM05D003937 ORTHO05D004583 1.2e-24 117.5 199 42.2
MD05G1134400 Malus domestica HOM05D003937 ORTHO05D004583 1.5e-24 117.1 169 41.4
TAR381G0291 Trochodendron aralioides HOM05D003937 ORTHO05D004583 2.0e-24 116.7 191 40.8
vmacro17300 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 3.4e-24 115.9 181 42.0
CAN.G1725.8 Capsicum annuum HOM05D003937 ORTHO05D004583 1.3e-23 114.0 166 42.2
DCAR_015663 Daucus carota HOM05D003937 ORTHO05D004583 2.2e-23 113.2 195 41.0
ClCG02G009960 Citrullus lanatus HOM05D003937 ORTHO05D004583 2.4e-22 109.8 188 40.4
Sopen01g054230 Solanum pennellii HOM05D003937 ORTHO05D004583 4.1e-22 109.0 189 40.7
arahy.Tifrunner.gnm1.ann1.388DF8 Arachis hypogaea HOM05D003937 ORTHO05D004583 1.2e-21 107.5 189 41.3
arahy.Tifrunner.gnm1.ann1.G18Z51 Arachis hypogaea HOM05D003937 ORTHO05D004583 1.2e-21 107.5 189 41.3
PGSC0003DMG400014661 Solanum tuberosum HOM05D003937 ORTHO05D004583 1.6e-21 107.1 169 40.8
Nn5g30963 Nelumbo nucifera HOM05D003937 ORTHO05D004583 2.7e-21 106.3 193 40.9
CANSAT25G1327 Cannabis sativa HOM05D003937 ORTHO05D004583 3.5e-21 105.9 193 41.5
Peaxi162Scf00362g00245 Petunia axillaris HOM05D003937 ORTHO05D004583 7.8e-21 104.8 168 40.5
Solyc01g112180.4 Solanum lycopersicum HOM05D003937 ORTHO05D004583 1.0e-20 104.4 169 39.6
QL11p055606 Quercus lobata HOM05D003937 ORTHO05D004583 1.3e-20 104.0 201 39.8
QL11p055907 Quercus lobata HOM05D003937 ORTHO05D004583 5.0e-20 102.1 200 38.5
arahy.Tifrunner.gnm1.ann1.13SVP6 Arachis hypogaea HOM05D003937 ORTHO05D004583 6.6e-20 101.7 187 40.6
AUR62012919 Chenopodium quinoa HOM05D003937 ORTHO05D004583 8.6e-20 101.3 190 40.0
MD10G1139500 Malus domestica HOM05D003937 ORTHO05D004583 8.6e-20 101.3 186 37.1
AUR62011702 Chenopodium quinoa HOM05D003937 ORTHO05D004583 1.1e-19 100.9 190 40.0
CsaV3_6G010160 Cucumis sativus L. HOM05D003937 ORTHO05D004583 1.5e-19 100.5 186 39.8
Hund06165 Selenicereus undatus HOM05D003937 ORTHO05D004583 1.5e-19 100.5 183 36.1
EL10Ac9g21245 Beta vulgaris HOM05D003937 ORTHO05D004583 2.5e-19 99.8 167 39.5
Oeu003435.2 Olea europaea HOM05D003937 ORTHO05D004583 4.3e-19 99.0 188 38.3
Potri.009G166100 Populus trichocarpa HOM05D003937 ORTHO05D004583 1.6e-18 97.1 193 37.8
Prupe.8G178200 Prunus persica HOM05D003937 ORTHO05D004583 1.8e-17 93.6 210 35.2
SalBow1G5464 Salvia bowleyana HOM05D003937 ORTHO05D004583 1.8e-17 93.6 196 37.8
Cpa.g.sc20.204 Carica papaya HOM05D003937 ORTHO05D004583 4.0e-17 92.4 193 35.8
Potri.004G205200 Populus trichocarpa HOM05D003937 ORTHO05D004583 4.0e-17 92.4 194 39.7
Sc18g0006030 Simmondsia chinensis HOM05D003937 ORTHO05D004583 8.9e-17 91.3 167 39.5
arahy.Tifrunner.gnm1.ann1.5851ZQ Arachis hypogaea HOM05D003937 ORTHO05D004583 3.4e-16 89.4 169 38.5
Migut.B00012 Erythranthe guttata HOM05D003937 ORTHO05D004583 3.4e-16 89.4 187 34.8
Lalb_Chr08g0246851 Lupinus albus HOM05D003937 ORTHO05D004583 9.8e-16 87.8 173 38.2
arahy.Tifrunner.gnm1.ann1.BKYH70 Arachis hypogaea HOM05D003937 ORTHO05D004583 1.3e-15 87.4 168 37.5
Sabra04G0138500 Salix brachista HOM05D003937 ORTHO05D004583 4.9e-15 85.5 196 39.8
PGR142G1962 Punica granatum HOM05D003937 ORTHO05D004583 6.4e-15 85.1 178 38.2
Sed0010938 Sechium edule HOM05D003937 ORTHO05D004583 6.4e-15 85.1 168 34.5
arahy.Tifrunner.gnm1.ann1.2P21EX Arachis hypogaea HOM05D003937 ORTHO05D004583 1.9e-14 83.6 160 38.8
MSTRG.16955 Avicennia marina HOM05D003937 ORTHO05D004583 1.9e-14 83.6 189 32.3
Eucgr.I01517 Eucalyptus grandis HOM05D003937 ORTHO05D004583 7.1e-14 81.6 174 37.9
Aqoxy5G01031 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 1.7e-12 77.0 178 35.4
PSO541G3051 Papaver somniferum HOM05D003937 ORTHO05D004583 1.1e-11 74.3 196 31.6
vmacro04409 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 3.3e-11 72.8 181 34.3
Lsat_1_v5_gn_3_48780 Lactuca sativa HOM05D003937 ORTHO05D004583 1.2e-10 70.9 168 33.9
RcHm_v2.0_Chr7g0215391 Rosa chinensis HOM05D003937 ORTHO05D004583 1.2e-10 70.9 177 33.3
Cc10_g00590 Coffea canephora HOM05D003937 ORTHO05D004583 2.1e-10 70.1 173 31.2
Nitab4.5_0000588g0020 Nicotiana tabacum HOM05D003937 ORTHO05D004583 2.8e-10 69.7 189 31.2
PSO675G5999 Papaver somniferum HOM05D003937 ORTHO05D004583 2.8e-10 69.7 198 31.8
arahy.Tifrunner.gnm1.ann1.X4XIB4 Arachis hypogaea HOM05D003937 ORTHO05D004583 4.7e-10 68.9 134 40.3
Prupe.5G011500 Prunus persica HOM05D003937 ORTHO05D004583 8.1e-10 68.2 174 32.8
Oeu033835.1 Olea europaea HOM05D003937 ORTHO05D004583 1.1e-09 67.8 195 32.8
QL02p014402 Quercus lobata HOM05D003937 ORTHO05D004583 1.4e-09 67.4 180 28.9
HanXRQChr12g0374421 Helianthus annuus HOM05D003937 ORTHO05D004583 3.1e-09 66.2 191 35.6
SGA_v2.0_scaffold32G13344 Striga asiatica HOM05D003937 ORTHO05D004583 3.1e-09 66.2 190 32.6
MSTRG.24495 Avicennia marina HOM05D003937 ORTHO05D004583 4.0e-09 65.9 179 32.4
ECA233G2935 Erigeron canadensis HOM05D003937 ORTHO05D004583 4.0e-09 65.9 191 35.1
CAN.G311.122 Capsicum annuum HOM05D003937 ORTHO05D004583 5.2e-09 65.5 187 28.9
SalBow6G3106 Salvia bowleyana HOM05D003937 ORTHO05D004583 5.2e-09 65.5 175 31.4
DCAR_013923 Daucus carota HOM05D003937 ORTHO05D004583 6.8e-09 65.1 198 27.3
Rhsim07G0256300 Rhododendron simsii HOM05D003937 ORTHO05D004583 6.8e-09 65.1 175 35.4
DCAR_016775 Daucus carota HOM05D003937 ORTHO05D004583 8.9e-09 64.7 202 29.7
RcHm_v2.0_Chr6g0280681 Rosa chinensis HOM05D003937 ORTHO05D004583 1.2e-08 64.3 87 46.0
Aqoxy6G01687 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 1.5e-08 63.9 170 29.4
Solyc04g082450.3 Solanum lycopersicum HOM05D003937 ORTHO05D004583 2.0e-08 63.5 186 29.0
Cfa014094 Carpinus fangiana HOM05D003937 ORTHO05D004583 2.6e-08 63.2 159 30.2
Lj4A806T76 Lonicera japonica HOM05D003937 ORTHO05D004583 2.6e-08 63.2 170 30.0
Sopen04g036060 Solanum pennellii HOM05D003937 ORTHO05D004583 2.6e-08 63.2 186 29.0
FAN04G2017 Fragaria x ananassa HOM05D003937 ORTHO05D004583 4.4e-08 62.4 176 34.7
PGSC0003DMG400009905 Solanum tuberosum HOM05D003937 ORTHO05D004583 9.9e-08 61.2 173 30.1
Oeu046353.1 Olea europaea HOM05D003937 ORTHO05D004583 1.3e-07 60.8 176 31.2
ECA246G4591 Erigeron canadensis HOM05D003937 ORTHO05D004583 1.7e-07 60.5 176 31.8
Actinidia37917 Actinidia chinensis HOM05D003937 ORTHO05D004583 2.2e-07 60.1 176 31.2
FvH4_5g25250 Fragaria vesca HOM05D003937 ORTHO05D004583 2.9e-07 59.7 175 32.0
Haze_22798 Corylus avellana HOM05D003937 ORTHO05D004583 4.9e-07 58.9 159 29.6
FAN18G0752 Fragaria x ananassa HOM05D003937 ORTHO05D004583 6.4e-07 58.5 175 32.0
FAN20G0177 Fragaria x ananassa HOM05D003937 ORTHO05D004583 5.4e-06 55.5 89 39.3
FAN08G1258 Fragaria x ananassa HOM05D003937 ORTHO05D004583 7.1e-06 55.1 175 31.4
MSTRG.22102 Avicennia marina HOM05D003937 ORTHO05D004583 9.2e-06 54.7 177 29.4
Haze_22797 Corylus avellana HOM05D003937 ORTHO05D004583 9.2e-06 54.7 130 27.7


User provided reference genes

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