Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5P156T63 Lonicera japonica HOM05D006707 ORTHO05D008243 1.5e-60 236.9 217 100.0
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 5.5e-39 165.2 195 64.6
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 6.5e-32 141.7 210 51.9
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 2.1e-27 126.7 77 80.5
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 6.3e-27 125.2 231 47.6
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 8.2e-27 124.8 77 79.2
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 1.4e-26 124.0 77 75.3
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 3.1e-26 122.9 77 76.6
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 5.3e-26 122.1 78 76.9
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 6.9e-26 121.7 77 79.2
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 6.9e-26 121.7 76 77.6
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 1.2e-25 120.9 77 74.0
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 2.0e-25 120.2 77 75.3
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 3.4e-25 119.4 77 76.6
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 5.0e-24 115.5 77 71.4
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 6.5e-24 115.2 75 73.3
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 8.5e-24 114.8 77 71.4
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 1.1e-23 114.4 75 73.3
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 1.9e-23 113.6 78 74.4
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 3.6e-22 109.4 72 70.8
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 1.8e-21 107.1 79 60.8
arahy.Tifrunner.gnm1.ann1.1F7K7B Arachis hypogaea HOM05D006707 ORTHO05D008243 2.3e-21 106.7 72 70.8
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 8.7e-21 104.8 76 63.2
BraA05t22010Z Brassica rapa HOM05D006707 ORTHO05D008243 1.6e-19 100.5 75 64.0
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 1.8e-18 97.1 74 66.2
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 2.4e-18 96.7 73 64.4
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 2.0e-17 93.6 62 77.4
RhsimUnG0220500 Rhododendron simsii HOM05D006707 ORTHO05D008243 4.5e-17 92.4 54 77.8
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 6.5e-16 88.6 51 84.3
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 6.5e-16 88.6 67 61.2
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 6.5e-16 88.6 51 84.3
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 1.4e-15 87.4 55 80.0
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 1.4e-15 87.4 67 59.7
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 1.9e-15 87.0 66 62.1
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 2.5e-15 86.7 51 82.4
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 3.2e-15 86.3 55 78.2
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 5.5e-15 85.5 55 78.2
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 6.1e-14 82.0 77 53.2
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 3.9e-13 79.3 51 68.6
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 2.0e-12 77.0 53 64.2
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 1.7e-11 73.9 62 58.1
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 2.8e-11 73.2 49 67.3
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 3.7e-11 72.8 52 63.5
MELO3C017354.2 Cucumis melo HOM05D006707 ORTHO05D008243 5.3e-10 68.9 41 80.5
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 2.0e-09 67.0 39 74.4
Manes.06G007451 Manihot esculenta HOM05D006707 ORTHO05D008243 3.4e-09 66.2 41 78.0
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 4.5e-09 65.9 37 81.1
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 7.7e-09 65.1 71 46.5
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 2.9e-08 63.2 38 73.7
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 3.8e-08 62.8 36 69.4
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 1.1e-07 61.2 76 47.4
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 1.1e-07 61.2 39 66.7
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 1.4e-07 60.8 49 61.2
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 2.5e-07 60.1 38 68.4
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 4.2e-07 59.3 37 67.6
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 1.2e-06 57.8 36 69.4
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 1.6e-06 57.4 77 44.2
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 4.7e-06 55.8 39 61.5
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 6.1e-06 55.5 31 74.2
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 6.1e-06 55.5 31 74.2
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 7.9e-06 55.1 37 59.5


User provided reference genes

Program Settings