Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5E683T0 Lonicera japonica HOM05D000664 ORTHO05D000491 1.3e-76 289.7 147 100.0
Lj5P697T4 Lonicera japonica HOM05D000664 ORTHO05D000491 7.5e-24 114.4 96 58.3
Lj7A282G43 Lonicera japonica HOM05D000664 ORTHO05D000491 1.2e-16 90.5 111 47.7
Lj7C282T19 Lonicera japonica HOM05D000664 ORTHO05D000491 2.8e-15 85.9 85 49.4
Potri.013G067800 Populus trichocarpa HOM05D000664 ORTHO05D000491 1.7e-12 76.6 93 46.2
Dinv26466 Davidia involucrata HOM05D000664 ORTHO05D000491 1.2e-10 70.5 78 52.6
Lj7C282T1 Lonicera japonica HOM05D000664 ORTHO05D000491 1.6e-10 70.1 77 49.4
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 2.8e-10 69.3 114 37.7
Potri.005G043500 Populus trichocarpa HOM05D000664 ORTHO05D000491 4.7e-10 68.6 113 39.8
Sabra05G0040400 Salix brachista HOM05D000664 ORTHO05D000491 1.8e-09 66.6 113 38.9
Eucgr.C02183 Eucalyptus grandis HOM05D000664 ORTHO05D000491 2.3e-09 66.2 88 42.0
Potri.003G215900 Populus trichocarpa HOM05D000664 ORTHO05D000491 2.3e-09 66.2 104 37.5
COL.COLO4_13626 Corchorus olitorius HOM05D000664 ORTHO05D000491 4.0e-09 65.5 70 44.3
CiPaw.15G154900 Carya illinoinensis HOM05D000664 ORTHO05D000491 5.2e-09 65.1 79 44.3
Sed0002650 Sechium edule HOM05D000664 ORTHO05D000491 5.2e-09 65.1 67 47.8
Potri.018G132800 Populus trichocarpa HOM05D000664 ORTHO05D000491 1.2e-08 63.9 100 33.0
COL.COLO4_29637 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.5e-08 63.5 81 39.5
CANSAT56G1457 Cannabis sativa HOM05D000664 ORTHO05D000491 2.0e-08 63.2 67 49.3
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 2.6e-08 62.8 85 41.2
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.6e-08 62.8 81 43.2
TAR626G1797 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.6e-08 62.8 74 45.9
CANSAT56G0713 Cannabis sativa HOM05D000664 ORTHO05D000491 3.4e-08 62.4 102 38.2
FvH4_2g35920 Fragaria vesca HOM05D000664 ORTHO05D000491 3.4e-08 62.4 82 39.0
Gohir.A12G196800 Gossypium hirsutum HOM05D000664 ORTHO05D000491 3.4e-08 62.4 92 42.4
Rhsim04G0064600 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.4e-08 62.0 90 37.8
Sabra01G0007300 Salix brachista HOM05D000664 ORTHO05D000491 4.4e-08 62.0 84 42.9
COL.COLO4_31801 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.8e-08 61.6 81 40.7
DCAR_018082 Daucus carota HOM05D000664 ORTHO05D000491 5.8e-08 61.6 83 43.4
Potri.006G071100 Populus trichocarpa HOM05D000664 ORTHO05D000491 7.5e-08 61.2 83 41.0
Sabra18G0112500 Salix brachista HOM05D000664 ORTHO05D000491 7.5e-08 61.2 93 35.5
PSO541G6017 Papaver somniferum HOM05D000664 ORTHO05D000491 9.8e-08 60.8 107 39.3
FvH4_3g32490 Fragaria vesca HOM05D000664 ORTHO05D000491 1.3e-07 60.5 53 47.2
FAN11G0439 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.3e-07 60.5 53 47.2
Nn8g41006 Nelumbo nucifera HOM05D000664 ORTHO05D000491 1.3e-07 60.5 86 39.5
PSO675G0924 Papaver somniferum HOM05D000664 ORTHO05D000491 1.3e-07 60.5 107 39.3
Sabra03G0161100 Salix brachista HOM05D000664 ORTHO05D001733 1.3e-07 60.5 100 38.0
COL.COLO4_37351 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.7e-07 60.1 101 37.6
FvH4_2g35940 Fragaria vesca HOM05D000664 ORTHO05D000491 1.7e-07 60.1 94 39.4
Rhsim03G0162000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.7e-07 60.1 80 46.2
Gohir.A13G160450 Gossypium hirsutum HOM05D000664 ORTHO05D000491 2.2e-07 59.7 102 37.3
Gohir.D12G199300 Gossypium hirsutum HOM05D000664 ORTHO05D000491 2.2e-07 59.7 92 42.4
Gorai.008G214500 Gossypium raimondii HOM05D000664 ORTHO05D000491 2.2e-07 59.7 92 42.4
CARHR205550 Cardamine hirsuta HOM05D000664 ORTHO05D000491 2.9e-07 59.3 112 36.6
Dinv26464 Davidia involucrata HOM05D000664 ORTHO05D000491 2.9e-07 59.3 78 41.0
PGR044G0383 Punica granatum HOM05D000664 ORTHO05D000491 2.9e-07 59.3 95 34.7
Cc06_g22370 Coffea canephora HOM05D000664 ORTHO05D000491 3.7e-07 58.9 60 46.7
FvH4_3g43790 Fragaria vesca HOM05D000664 ORTHO05D000491 3.7e-07 58.9 82 40.2
FAN21G1670 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.7e-07 58.9 82 40.2
TAR626G0460 Trochodendron aralioides HOM05D000664 ORTHO05D000491 3.7e-07 58.9 65 46.2
Ah.12g054240 Amaranthus hybridus HOM05D000664 ORTHO05D000491 4.9e-07 58.5 106 34.0
FAN05G4782 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.9e-07 58.5 77 36.4
FAN22G1828 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.9e-07 58.5 103 35.9
Rhsim04G0064800 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.9e-07 58.5 68 44.1
RcHm_v2.0_Chr4g0398001 Rosa chinensis HOM05D000664 ORTHO05D000491 4.9e-07 58.5 87 41.4
RcHm_v2.0_Chr6g0264241 Rosa chinensis HOM05D000664 ORTHO05D000491 4.9e-07 58.5 88 44.3
GSVIVG01017506001 Vitis vinifera HOM05D000664 ORTHO05D000491 4.9e-07 58.5 60 50.0
AL6G17920 Arabidopsis lyrata HOM05D000664 ORTHO05D000491 6.4e-07 58.2 96 38.5
CSS0016323 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 6.4e-07 58.2 61 45.9
DCAR_018079 Daucus carota HOM05D000664 ORTHO05D000491 6.4e-07 58.2 106 40.6
FvH4_4g06370 Fragaria vesca HOM05D000664 ORTHO05D000491 6.4e-07 58.2 103 34.0
FAN12G1944 Fragaria x ananassa HOM05D000664 ORTHO05D000491 6.4e-07 58.2 103 34.0
Hma1.2p1_1404F.1_g281360 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 6.4e-07 58.2 80 41.2
Potri.013G065500 Populus trichocarpa HOM05D000664 ORTHO05D000491 6.4e-07 58.2 88 42.0
Rhsim10G0184300 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.4e-07 58.2 80 42.5
CSS0004085 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 8.3e-07 57.8 61 45.9
COL.COLO4_31760 Corchorus olitorius HOM05D000664 ORTHO05D000491 8.3e-07 57.8 46 54.3
Duzib106G0932 Durio zibethinus HOM05D000664 ORTHO05D000491 8.3e-07 57.8 54 50.0
Duzib177G0294 Durio zibethinus HOM05D000664 ORTHO05D000491 8.3e-07 57.8 68 44.1
FAN11G3889 Fragaria x ananassa HOM05D000038 ORTHO05D000143 8.3e-07 57.8 82 40.2
FAN16G1475 Fragaria x ananassa HOM05D000664 ORTHO05D000491 8.3e-07 57.8 52 48.1
Gorai.001G050700 Gossypium raimondii HOM05D000664 ORTHO05D000491 8.3e-07 57.8 82 42.7
Hma1.2p1_1883F.1_g306465 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 8.3e-07 57.8 82 39.0
Hma1.2p1_3648F.1_g337160 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 8.3e-07 57.8 82 39.0
Rhsim04G0064700 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.3e-07 57.8 58 44.8
Rhsim11G0069100 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.3e-07 57.8 60 43.3
CANSAT56G0364 Cannabis sativa HOM05D000664 ORTHO05D000491 1.1e-06 57.4 80 45.0
AUR62004782 Chenopodium quinoa HOM05D000664 ORTHO05D000491 1.1e-06 57.4 86 39.5
Duzib205G1254 Durio zibethinus HOM05D000664 ORTHO05D000491 1.1e-06 57.4 97 40.2
FvH4_6g52861 Fragaria vesca HOM05D000664 ORTHO05D000491 1.1e-06 57.4 82 40.2
FvH4_6g53072 Fragaria vesca HOM05D000664 ORTHO05D000491 1.1e-06 57.4 87 37.9
FAN09G0982 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-06 57.4 79 38.0
FAN14G3142 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-06 57.4 87 37.9
FAN14G3826 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-06 57.4 82 40.2
FAN17G0010 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-06 57.4 101 33.7
QL11p009388 Quercus lobata HOM05D000664 ORTHO05D000491 1.1e-06 57.4 81 42.0
Rhsim03G0162100 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.1e-06 57.4 80 45.0
Rhsim04G0065200 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.1e-06 57.4 69 43.5
RcHm_v2.0_Chr2g0174541 Rosa chinensis HOM05D000031 ORTHO05D035854 1.1e-06 57.4 87 39.1
DCAR_028594 Daucus carota HOM05D000664 ORTHO05D000491 1.4e-06 57.0 94 39.4
Duzib177G1102 Durio zibethinus HOM05D000664 ORTHO05D000491 1.4e-06 57.0 77 36.4
Duzib177G1156 Durio zibethinus HOM05D000664 ORTHO05D000491 1.4e-06 57.0 86 38.4
FAN07G2627 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.4e-06 57.0 103 34.0
Nn8g41009 Nelumbo nucifera HOM05D000664 ORTHO05D000491 1.4e-06 57.0 66 43.9
Sabra13G0057300 Salix brachista HOM05D000664 ORTHO05D000491 1.4e-06 57.0 89 39.3
CSS0008769 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.9e-06 56.6 61 49.2
CSS0011530 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.9e-06 56.6 61 49.2
FvH4_2g35930 Fragaria vesca HOM05D000664 ORTHO05D000491 1.9e-06 56.6 88 39.8
FvH4_2g35950 Fragaria vesca HOM05D000664 ORTHO05D000491 1.9e-06 56.6 79 41.8
FvH4_6g52830 Fragaria vesca HOM05D000664 ORTHO05D000491 1.9e-06 56.6 80 40.0
FAN27G0857 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.9e-06 56.6 99 38.4
FAN27G2908 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.9e-06 56.6 88 39.8
Gohir.A07G043150 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.9e-06 56.6 89 38.2
Manes.06G131800 Manihot esculenta HOM05D000664 ORTHO05D000491 1.9e-06 56.6 58 50.0
Rhsim01G0005800 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.9e-06 56.6 83 39.8
Ah.04g163020 Amaranthus hybridus HOM05D000664 ORTHO05D000491 2.4e-06 56.2 62 46.8
ClCG01G004670 Citrullus lanatus HOM05D000664 ORTHO05D000491 2.4e-06 56.2 56 48.2
DCAR_018081 Daucus carota HOM05D000664 ORTHO05D000491 2.4e-06 56.2 75 42.7
RcHm_v2.0_Chr2g0174531 Rosa chinensis HOM05D000664 ORTHO05D000491 2.4e-06 56.2 87 36.8
COL.COLO4_38550 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.2e-06 55.8 52 48.1
MELO3C005495.2 Cucumis melo HOM05D000664 ORTHO05D000491 3.2e-06 55.8 65 44.6
Dinv26463 Davidia involucrata HOM05D000664 ORTHO05D000491 3.2e-06 55.8 84 38.1
FAN02G4533 Fragaria x ananassa HOM05D000664 ORTHO05D035854 3.2e-06 55.8 82 40.2
Lj3A384G19 Lonicera japonica HOM05D000664 ORTHO05D000491 3.2e-06 55.8 64 46.9
Rhsim01G0016700 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.2e-06 55.8 61 47.5
Rhsim01G0017800 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.2e-06 55.8 61 47.5
RcHm_v2.0_Chr2g0174451 Rosa chinensis HOM05D000664 ORTHO05D000491 3.2e-06 55.8 82 39.0
COL.COLO4_37345 Corchorus olitorius HOM05D000664 ORTHO05D000491 4.1e-06 55.5 79 38.0
Duzib106G0771 Durio zibethinus HOM05D000664 ORTHO05D000491 4.1e-06 55.5 110 34.5
Hma1.2p1_0432F.1_g152025 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 4.1e-06 55.5 94 35.1
Hma1.2p1_1883F.1_g306450 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 4.1e-06 55.5 110 33.6
Rhsim11G0068800 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.1e-06 55.5 61 44.3
Sc09g0004440 Simmondsia chinensis HOM05D000664 ORTHO05D000491 4.1e-06 55.5 102 38.2
Thecc.03G149500 Theobroma cacao HOM05D000664 ORTHO05D000491 4.1e-06 55.5 73 45.2
Thecc.05G238200 Theobroma cacao HOM05D000664 ORTHO05D000491 4.1e-06 55.5 72 38.9
COL.COLO4_09300 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.4e-06 55.1 81 37.0
Duzib068G1024 Durio zibethinus HOM05D000664 ORTHO05D000491 5.4e-06 55.1 89 39.3
Gohir.A13G096800 Gossypium hirsutum HOM05D000664 ORTHO05D000491 5.4e-06 55.1 54 46.3
Gohir.D13G101806 Gossypium hirsutum HOM05D000664 ORTHO05D000491 5.4e-06 55.1 54 46.3
Gorai.013G114100 Gossypium raimondii HOM05D000664 ORTHO05D000491 5.4e-06 55.1 54 46.3
Manes.14G038100 Manihot esculenta HOM05D000664 ORTHO05D000491 5.4e-06 55.1 55 50.9
Rhsim01G0013400 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.4e-06 55.1 84 38.1
Sabra01G0178200 Salix brachista HOM05D000664 ORTHO05D000491 5.4e-06 55.1 74 39.2
THA.LOC104801597 Tarenaya hassleriana HOM05D000664 ORTHO05D000491 5.4e-06 55.1 86 39.5
FAN07G2069 Fragaria x ananassa HOM05D000664 ORTHO05D000491 7.0e-06 54.7 82 35.4
FAN17G2449 Fragaria x ananassa HOM05D000664 ORTHO05D000491 7.0e-06 54.7 82 35.4
Gohir.A11G278000 Gossypium hirsutum HOM05D000664 ORTHO05D000491 7.0e-06 54.7 47 53.2
Gorai.013G197000 Gossypium raimondii HOM05D000664 ORTHO05D000491 7.0e-06 54.7 69 43.5
Nitab4.5_0004217g0020 Nicotiana tabacum HOM05D000664 ORTHO05D000491 7.0e-06 54.7 86 40.7
PSO566G0320 Papaver somniferum HOM05D000664 ORTHO05D000491 7.0e-06 54.7 57 54.4
RcHm_v2.0_Chr4g0388001 Rosa chinensis HOM05D000664 ORTHO05D000491 7.0e-06 54.7 61 49.2
Cc06_g22360 Coffea canephora HOM05D000664 ORTHO05D000491 9.2e-06 54.3 86 40.7
COL.COLO4_37361 Corchorus olitorius HOM05D000664 ORTHO05D000491 9.2e-06 54.3 81 40.7
FAN14G3303 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.2e-06 54.3 78 37.2
RcHm_v2.0_Chr5g0059531 Rosa chinensis HOM05D000664 ORTHO05D000491 9.2e-06 54.3 65 43.1


User provided reference genes

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