Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5E603T0 Lonicera japonica HOM05D041301 ORTHO05D234250 2.4e-53 211.8 101 100.0
Lj5A604G7 Lonicera japonica HOM05D041301 ORTHO05D235222 8.7e-48 193.4 100 91.0
Oeu050801.1 Olea europaea HOM05D000022 ORTHO05D000071 1.9e-10 69.3 88 37.5
MELO3C007354.2 Cucumis melo HOM05D000022 ORTHO05D000071 4.7e-09 64.7 103 32.0
TPR.G15759 Trifolium pratense HOM05D000022 ORTHO05D000306 2.3e-08 62.4 104 35.6
Medtr1g021642 Medicago truncatula HOM05D000022 ORTHO05D000071 3.0e-08 62.0 104 35.6
CsaV3_6G049390 Cucumis sativus L. HOM05D000022 ORTHO05D000306 4.0e-08 61.6 103 31.1
Rhsim07G0196100 Rhododendron simsii HOM05D000022 ORTHO05D000306 5.2e-08 61.2 98 36.7
Duzib160G0050 Durio zibethinus HOM05D000022 ORTHO05D000071 6.7e-08 60.8 101 33.7
Oeu016729.1 Olea europaea HOM05D000022 ORTHO05D000071 6.7e-08 60.8 86 38.4
HanXRQChr15g0471351 Helianthus annuus HOM05D000022 ORTHO05D000071 8.8e-08 60.5 98 34.7
QL09p045759 Quercus lobata HOM05D000022 ORTHO05D000306 8.8e-08 60.5 101 36.6
TWI38G0604 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 8.8e-08 60.5 84 32.1
RhsimUnG0078600 Rhododendron simsii HOM05D000022 ORTHO05D000306 1.1e-07 60.1 86 36.0
Migut.M01270 Erythranthe guttata HOM05D000022 ORTHO05D000071 2.0e-07 59.3 87 34.5
Lsat_1_v5_gn_7_17880 Lactuca sativa HOM05D000022 ORTHO05D000071 2.0e-07 59.3 101 36.6
QL09p045775 Quercus lobata HOM05D000022 ORTHO05D000306 2.0e-07 59.3 101 35.6
Thecc.06G210200 Theobroma cacao HOM05D000022 ORTHO05D000071 2.0e-07 59.3 101 30.7
Dinv17842 Davidia involucrata HOM05D000022 ORTHO05D000306 3.3e-07 58.5 105 36.2
Manes.16G018032 Manihot esculenta HOM05D000022 ORTHO05D000071 3.3e-07 58.5 101 32.7
Eucgr.D00835 Eucalyptus grandis HOM05D000022 ORTHO05D000306 4.4e-07 58.2 101 30.7
GSVIVG01006683001 Vitis vinifera HOM05D000022 ORTHO05D000071 4.4e-07 58.2 101 31.7
Eucgr.D00839 Eucalyptus grandis HOM05D000022 ORTHO05D000306 5.7e-07 57.8 101 30.7
Glyma.20G137700 Glycine max HOM05D000022 ORTHO05D000071 5.7e-07 57.8 103 28.2
Oeu035922.1 Olea europaea HOM05D000022 ORTHO05D000071 5.7e-07 57.8 101 34.7
Potri.004G026350 Populus trichocarpa HOM05D000022 ORTHO05D000071 5.7e-07 57.8 95 33.7
EL10Ac7g17984 Beta vulgaris HOM05D000022 ORTHO05D000306 7.5e-07 57.4 101 32.7
CANSAT56G2864 Cannabis sativa HOM05D000022 ORTHO05D000071 7.5e-07 57.4 104 31.7
Dinv17841 Davidia involucrata HOM05D000022 ORTHO05D000306 7.5e-07 57.4 91 36.3
LjContig00408g0014473 Lotus japonicus HOM05D000022 ORTHO05D000071 7.5e-07 57.4 101 30.7
Rhsim02G0114400 Rhododendron simsii HOM05D000022 ORTHO05D000071 7.5e-07 57.4 98 34.7
RcHm_v2.0_Chr5g0004301 Rosa chinensis HOM05D000022 ORTHO05D000306 7.5e-07 57.4 102 33.3
SalBow8G0016 Salvia bowleyana HOM05D000022 ORTHO05D000071 7.5e-07 57.4 99 31.3
Aqoxy7G00437 Aquilegia oxysepala HOM05D000022 ORTHO05D000306 9.7e-07 57.0 105 35.2
DCAR_008118 Daucus carota HOM05D000022 ORTHO05D000071 9.7e-07 57.0 86 39.5
RcHm_v2.0_Chr6g0299021 Rosa chinensis HOM05D000022 ORTHO05D000071 9.7e-07 57.0 99 30.3
TWI38G1685 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 9.7e-07 57.0 101 28.7
HanXRQChr05g0130671 Helianthus annuus HOM05D000022 ORTHO05D000071 1.3e-06 56.6 101 35.6
MD01G1027900 Malus domestica HOM05D000022 ORTHO05D000071 1.3e-06 56.6 97 28.9
Nn1g03701 Nelumbo nucifera HOM05D000022 ORTHO05D000071 1.3e-06 56.6 101 29.7
HanXRQChr10g0304631 Helianthus annuus HOM05D000022 ORTHO05D000306 1.7e-06 56.2 94 30.9
Prupe.6G184100 Prunus persica HOM05D000022 ORTHO05D000306 1.7e-06 56.2 97 28.9
Rhsim07G0196200 Rhododendron simsii HOM05D000022 ORTHO05D000306 1.7e-06 56.2 86 34.9
Rhsim07G0197300 Rhododendron simsii HOM05D000022 ORTHO05D000306 1.7e-06 56.2 104 34.6
GSVIVG01006740001 Vitis vinifera HOM05D000022 ORTHO05D000071 1.7e-06 56.2 101 30.7
Lj1C1223T0 Lonicera japonica HOM05D000022 ORTHO05D000306 2.2e-06 55.8 101 33.7
Manes.16G017900 Manihot esculenta HOM05D000022 ORTHO05D000071 2.2e-06 55.8 101 30.7
QL09p026146 Quercus lobata HOM05D000022 ORTHO05D000071 2.2e-06 55.8 103 33.0
VMungo0720G0057 Vigna mungo HOM05D000022 ORTHO05D000071 2.2e-06 55.8 103 34.0
MELO3C002496.2 Cucumis melo HOM05D000022 ORTHO05D000071 2.8e-06 55.5 86 36.0
MELO3C002501.2 Cucumis melo HOM05D000022 ORTHO05D000071 2.8e-06 55.5 100 33.0
MD02G1101400 Malus domestica HOM05D000022 ORTHO05D000071 2.8e-06 55.5 102 29.4
Prupe.6G184500 Prunus persica HOM05D000022 ORTHO05D000071 2.8e-06 55.5 97 27.8
RcHm_v2.0_Chr5g0004371 Rosa chinensis HOM05D000022 ORTHO05D000071 2.8e-06 55.5 102 30.4
CANSAT54G1332 Cannabis sativa HOM05D000022 ORTHO05D000306 3.7e-06 55.1 102 31.4
TPR.G5549 Trifolium pratense HOM05D000022 ORTHO05D000306 3.7e-06 55.1 105 30.5
TWI38G0808 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 3.7e-06 55.1 87 34.5
CANSAT56G0384 Cannabis sativa HOM05D000022 ORTHO05D000071 4.8e-06 54.7 88 31.8
Cpa.g.sc75.106 Carica papaya HOM05D000022 ORTHO05D000071 4.8e-06 54.7 86 30.2
Haze_06719 Corylus avellana HOM05D000022 ORTHO05D000071 4.8e-06 54.7 102 29.4
Lj5C604T2 Lonicera japonica HOM05D041301 ORTHO05D234108 4.8e-06 54.7 47 55.3
Thecc.06G210500 Theobroma cacao HOM05D000022 ORTHO05D000071 4.8e-06 54.7 101 29.7
VMungo0720G1674 Vigna mungo HOM05D000022 ORTHO05D000071 4.8e-06 54.7 105 34.3
CiPaw.04G093500 Carya illinoinensis HOM05D000022 ORTHO05D000071 6.3e-06 54.3 84 34.5
DCAR_004180 Daucus carota HOM05D000022 ORTHO05D000071 6.3e-06 54.3 84 33.3
Phvul.007G050200 Phaseolus vulgaris HOM05D000022 ORTHO05D000071 6.3e-06 54.3 97 30.9
arahy.Tifrunner.gnm1.ann1.R4IR89 Arachis hypogaea HOM05D000022 ORTHO05D000071 8.2e-06 53.9 86 31.4
FAN24G0706 Fragaria x ananassa HOM05D000022 ORTHO05D000071 8.2e-06 53.9 99 29.3
FAN27G2441 Fragaria x ananassa HOM05D000022 ORTHO05D000071 8.2e-06 53.9 99 29.3
Gohir.D06G125400 Gossypium hirsutum HOM05D000022 ORTHO05D000071 8.2e-06 53.9 101 27.7
Prupe.6G184400 Prunus persica HOM05D000022 ORTHO05D000071 8.2e-06 53.9 91 29.7
TPR.G15752 Trifolium pratense HOM05D000022 ORTHO05D000306 8.2e-06 53.9 104 32.7
VMungo0720G2926 Vigna mungo HOM05D000022 ORTHO05D000071 8.2e-06 53.9 109 32.1


User provided reference genes

Program Settings