Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5E336G0 Lonicera japonica HOM05D007560 ORTHO05D005947 1.9e-80 302.4 141 100.0
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 5.4e-64 247.7 141 81.6
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 2.9e-41 172.2 151 57.6
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 4.6e-39 164.9 146 56.8
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 1.0e-38 163.7 125 62.4
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 7.4e-37 157.5 151 54.3
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 1.3e-36 156.8 144 54.9
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 3.7e-36 155.2 145 55.2
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 6.1e-31 137.9 143 51.0
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.3e-28 130.2 157 45.9
Lj5P358T14 Lonicera japonica HOM05D007560 ORTHO05D005947 1.9e-24 116.3 83 65.1
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 2.5e-24 115.9 141 45.4
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.2e-24 115.2 141 47.5
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.6e-23 112.1 146 43.2
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 6.1e-23 111.3 146 44.5
Lj8P356T28 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-22 110.2 84 63.1
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.7e-20 103.2 141 40.4
Lj6C626T9 Lonicera japonica HOM05D007560 ORTHO05D005947 2.2e-20 102.8 78 60.3
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 6.3e-20 101.3 148 40.5
Lj4A614G14 Lonicera japonica HOM05D007560 ORTHO05D005947 1.0e-17 94.0 87 55.2
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.2e-17 92.8 142 40.1
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 7.9e-15 84.3 129 37.2
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 8.8e-14 80.9 162 34.6
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.6e-13 79.3 68 58.8
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.6e-13 79.3 68 58.8
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.4e-13 77.8 113 42.5
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.7e-12 76.6 68 57.4
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 1.8e-11 73.2 142 32.4
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 1.6e-10 70.1 136 31.6
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 3.5e-10 68.9 55 58.2
Actinidia01716 Actinidia chinensis HOM05D007560 ORTHO05D005947 1.0e-09 67.4 54 57.4
Lj8A400T5 Lonicera japonica HOM05D007560 ORTHO05D005947 2.2e-09 66.2 48 60.4
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.8e-09 65.5 141 34.0
Hund19676 Selenicereus undatus HOM05D007560 ORTHO05D005947 1.5e-08 63.5 83 39.8
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.2e-08 62.0 54 53.7
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 8.0e-07 57.8 45 60.0
Migut.G01259 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.4e-06 57.0 114 32.5
Ca_10651_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.8e-06 56.6 116 35.3
Ca_10654_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.8e-06 56.6 116 35.3
GSVIVG01008137001 Vitis vinifera HOM05D000007 ORTHO05D007631 2.3e-06 56.2 85 32.9
Ca_10652_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 4.0e-06 55.5 62 43.5
Aqoxy2G03979 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.7e-06 54.7 65 38.5
HanXRQChr07g0185881 Helianthus annuus HOM05D000007 ORTHO05D000017 6.7e-06 54.7 47 55.3
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 6.7e-06 54.7 88 39.8
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 8.8e-06 54.3 116 31.9
ECA240G0379 Erigeron canadensis HOM05D000007 ORTHO05D000017 8.8e-06 54.3 118 30.5
HanXRQChr10g0295591 Helianthus annuus HOM05D000007 ORTHO05D000521 8.8e-06 54.3 67 38.8


User provided reference genes

Program Settings