Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5E258T0 Lonicera japonica HOM05D012292 ORTHO05D012234 1.6e-188 662.5 314 100.0
Lj5P271T43 Lonicera japonica HOM05D012292 ORTHO05D012234 5.5e-48 195.7 153 60.8
Lj5P260T19 Lonicera japonica HOM05D012292 ORTHO05D012234 4.8e-44 182.6 301 33.6
Lj5C264T5 Lonicera japonica HOM05D012292 ORTHO05D012234 6.0e-39 165.6 322 32.6
Lju3917C0T1 Lonicera japonica HOM05D012292 ORTHO05D012234 2.5e-37 160.2 322 32.0
Lj5P564T10 Lonicera japonica HOM05D012292 ORTHO05D012234 4.1e-35 152.9 306 32.7
RcHm_v2.0_Chr2g0136121 Rosa chinensis HOM05D017060 ORTHO05D012234 4.1e-35 152.9 340 32.9
Lj5C264T6 Lonicera japonica HOM05D012292 ORTHO05D012234 1.2e-34 151.4 324 30.9
Lj5C265T4 Lonicera japonica HOM05D012292 ORTHO05D012234 1.1e-29 134.8 248 34.3
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 1.9e-29 134.0 279 31.5
Lj5P256T8 Lonicera japonica HOM05D045830 ORTHO05D012234 4.1e-27 126.3 130 51.5
Lju3917C0T2 Lonicera japonica HOM05D012292 ORTHO05D012234 4.1e-27 126.3 256 29.7
Lj5A265T30 Lonicera japonica HOM05D012292 ORTHO05D012234 4.5e-26 122.9 172 36.6
Lj5P257T9 Lonicera japonica HOM05D045830 ORTHO05D012234 1.4e-24 117.9 128 50.0
Lj5C247T1 Lonicera japonica HOM05D031129 ORTHO05D012234 1.2e-23 114.8 295 29.2
Lj5A250G20 Lonicera japonica HOM05D012292 ORTHO05D012234 3.1e-19 100.1 260 28.5
FAN15G2239 Fragaria x ananassa HOM05D017060 ORTHO05D012234 5.9e-18 95.9 208 33.7
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 7.2e-16 89.0 211 29.9
CSS0024213 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 9.4e-16 88.6 210 29.5
FvH4_1g25891 Fragaria vesca HOM05D017060 ORTHO05D012234 2.2e-12 77.4 163 28.8
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 8.2e-12 75.5 120 37.5
Lj5A252G43 Lonicera japonica HOM05D012292 ORTHO05D012234 5.3e-11 72.8 126 34.9
CSS0010561 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.2e-10 71.6 212 28.8
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 2.2e-09 67.4 141 29.1
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 8.5e-09 65.5 162 31.5
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 1.1e-08 65.1 153 28.8
DCAR_025514 Daucus carota HOM05D013255 ORTHO05D011422 4.2e-08 63.2 312 24.0
Lj5C247T0 Lonicera japonica HOM05D031129 ORTHO05D012234 1.2e-07 61.6 143 30.1
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 6.7e-06 55.8 116 28.4


User provided reference genes

Program Settings