Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5E203T0 Lonicera japonica HOM05D007602 ORTHO05D009086 4.5e-29 130.6 66 100.0
CAN.G322.99 Capsicum annuum HOM05D007602 ORTHO05D009086 8.6e-20 99.8 55 83.6
CSS0038117 Camellia sinensis var. sinensis HOM05D007602 ORTHO05D009086 1.2e-18 95.9 60 75.0
MELO3C021943.2 Cucumis melo HOM05D007602 ORTHO05D009086 2.1e-18 95.1 55 80.0
CsaV3_2G014370 Cucumis sativus L. HOM05D007602 ORTHO05D009086 2.1e-18 95.1 55 80.0
Hma1.2p1_0584F.1_g183350 Hydrangea macrophylla HOM05D007602 ORTHO05D009086 2.1e-18 95.1 62 72.6
Hma1.2p1_1353F.1_g277670 Hydrangea macrophylla HOM05D007602 ORTHO05D009086 4.7e-18 94.0 55 78.2
Hma1.2p1_2724F.1_g327525 Hydrangea macrophylla HOM05D007602 ORTHO05D009086 4.7e-18 94.0 55 78.2
Potri.004G149200 Populus trichocarpa HOM05D007602 ORTHO05D009086 4.7e-18 94.0 55 80.0
ClCG09G017780 Citrullus lanatus HOM05D007602 ORTHO05D009086 6.1e-18 93.6 55 78.2
Gohir.A04G129200 Gossypium hirsutum HOM05D007602 ORTHO05D009086 6.1e-18 93.6 55 80.0
Gorai.012G163800 Gossypium raimondii HOM05D007602 ORTHO05D009086 6.1e-18 93.6 55 80.0
Thecc.08G131300 Theobroma cacao HOM05D007602 ORTHO05D009086 1.0e-17 92.8 55 81.8
Gohir.A04G129300 Gossypium hirsutum HOM05D007602 ORTHO05D009086 1.4e-17 92.4 55 80.0
Gohir.D04G174400 Gossypium hirsutum HOM05D007602 ORTHO05D009086 1.4e-17 92.4 55 80.0
Gorai.012G163900 Gossypium raimondii HOM05D007602 ORTHO05D009086 1.4e-17 92.4 55 80.0
Manes.17G097600 Manihot esculenta HOM05D007602 ORTHO05D009086 1.8e-17 92.0 55 78.2
Manes.15G146500 Manihot esculenta HOM05D007602 ORTHO05D009086 2.3e-17 91.7 55 78.2
Duzib132G1115 Durio zibethinus HOM05D007602 ORTHO05D009086 3.0e-17 91.3 55 74.5
Gohir.D04G174300 Gossypium hirsutum HOM05D007602 ORTHO05D009086 4.0e-17 90.9 55 78.2
Gorai.004G104500 Gossypium raimondii HOM05D007602 ORTHO05D009086 4.0e-17 90.9 55 78.2
Sabra04G0099200 Salix brachista HOM05D007602 ORTHO05D009086 4.0e-17 90.9 53 79.2
Sed0020423 Sechium edule HOM05D007602 ORTHO05D009086 5.2e-17 90.5 55 74.5
Migut.B00282 Erythranthe guttata HOM05D007602 ORTHO05D009086 8.9e-17 89.7 55 76.4
Glyma.11G122300 Glycine max HOM05D007602 ORTHO05D009086 8.9e-17 89.7 55 76.4
Thecc.02G030000 Theobroma cacao HOM05D007602 ORTHO05D009086 8.9e-17 89.7 55 78.2
Ciclev10029767m.g Citrus clementina HOM05D007602 ORTHO05D009086 1.5e-16 89.0 55 74.5
PGR042G2915 Punica granatum HOM05D007602 ORTHO05D009086 1.5e-16 89.0 55 72.7
Lj3g0015904 Lotus japonicus HOM05D007602 ORTHO05D009086 3.4e-16 87.8 55 72.7
Medtr4g068710 Medicago truncatula HOM05D007602 ORTHO05D009086 3.4e-16 87.8 55 72.7
Solyc01g109220.4 Solanum lycopersicum HOM05D007602 ORTHO05D009086 3.4e-16 87.8 55 72.7
PGSC0003DMG400025161 Solanum tuberosum HOM05D007602 ORTHO05D009086 3.4e-16 87.8 55 72.7
Ca_07356_v3 Cicer arietinum L. HOM05D007602 ORTHO05D009086 4.4e-16 87.4 55 74.5
COL.COLO4_17788 Corchorus olitorius HOM05D007602 ORTHO05D009086 4.4e-16 87.4 55 74.5
Phvul.011G049200 Phaseolus vulgaris HOM05D007602 ORTHO05D009086 4.4e-16 87.4 55 74.5
Duzib248G0323 Durio zibethinus HOM05D007602 ORTHO05D009086 5.7e-16 87.0 55 72.7
Duzib248G0595 Durio zibethinus HOM05D007602 ORTHO05D009086 5.7e-16 87.0 55 72.7
Duzib248G1495 Durio zibethinus HOM05D007602 ORTHO05D009086 5.7e-16 87.0 55 72.7
Potri.009G110100 Populus trichocarpa HOM05D007602 ORTHO05D009086 5.7e-16 87.0 55 70.9
VMungo1127G0479 Vigna mungo HOM05D007602 ORTHO05D009086 5.7e-16 87.0 51 80.4
Cfa004963 Carpinus fangiana HOM05D007602 ORTHO05D009086 9.8e-16 86.3 55 70.9
CiPaw.05G059500 Carya illinoinensis HOM05D007602 ORTHO05D009086 9.8e-16 86.3 55 72.7
Glyma.12G047200 Glycine max HOM05D007602 ORTHO05D009086 1.3e-15 85.9 55 72.7
Oeu007232.1 Olea europaea HOM05D007602 ORTHO05D009086 1.3e-15 85.9 55 70.9
Sed0019655 Sechium edule HOM05D007602 ORTHO05D009086 1.7e-15 85.5 55 67.3
Haze_02438 Corylus avellana HOM05D007602 ORTHO05D009086 2.2e-15 85.1 53 71.7
Glyma.12G082000 Glycine max HOM05D007602 ORTHO05D009086 2.8e-15 84.7 53 73.6
Lsat_1_v5_gn_9_109200 Lactuca sativa HOM05D007602 ORTHO05D009086 2.8e-15 84.7 54 70.4
Cpa.g.sc62.91 Carica papaya HOM05D007602 ORTHO05D009086 3.7e-15 84.3 60 66.7
Glyma.16G059100 Glycine max HOM05D007602 ORTHO05D009086 3.7e-15 84.3 51 78.4
Lalb_Chr01g0002891 Lupinus albus HOM05D007602 ORTHO05D009086 1.1e-14 82.8 55 70.9
A08p03960 Brassica napus HOM05D007602 ORTHO05D009086 1.4e-14 82.4 55 67.3
AL1G56570 Arabidopsis lyrata HOM05D007602 ORTHO05D009086 1.8e-14 82.0 55 65.5
Nn6g32178 Nelumbo nucifera HOM05D007602 ORTHO05D009086 1.8e-14 82.0 55 70.9
TWI31G0092 Tripterygium wilfordii HOM05D007602 ORTHO05D009086 1.8e-14 82.0 55 70.9
AT1G49410 Arabidopsis thaliana HOM05D007602 ORTHO05D009086 2.4e-14 81.6 55 63.6
Carub.0001s3861 Capsella rubella HOM05D007602 ORTHO05D009086 3.1e-14 81.3 55 65.5
Lalb_Chr03g0025901 Lupinus albus HOM05D007602 ORTHO05D009086 3.1e-14 81.3 55 69.1
Prupe.8G107900 Prunus persica HOM05D007602 ORTHO05D009086 3.1e-14 81.3 55 65.5
CANSAT25G1814 Cannabis sativa HOM05D007602 ORTHO05D009086 7.0e-14 80.1 55 67.3
DCAR_022083 Daucus carota HOM05D007602 ORTHO05D009086 7.0e-14 80.1 55 65.5
BcaB02g11073 Brassica carinata HOM05D007602 ORTHO05D009086 1.2e-13 79.3 55 61.8
CARHR039420 Cardamine hirsuta HOM05D007602 ORTHO05D009086 1.2e-13 79.3 55 63.6
Nn5g29445 Nelumbo nucifera HOM05D007602 ORTHO05D009086 1.6e-13 79.0 55 67.3
BcaB04g17343 Brassica carinata HOM05D007602 ORTHO05D009086 2.0e-13 78.6 55 63.6
THA.LOC104798806 Tarenaya hassleriana HOM05D007602 ORTHO05D009086 2.0e-13 78.6 55 65.5
THA.LOC104808449 Tarenaya hassleriana HOM05D007602 ORTHO05D009086 2.0e-13 78.6 55 65.5
FAN20G1774 Fragaria x ananassa HOM05D007602 ORTHO05D009086 3.5e-13 77.8 52 69.2
MD10G1085000 Malus domestica HOM05D007602 ORTHO05D009086 5.9e-13 77.0 51 68.6
RcHm_v2.0_Chr6g0262021 Rosa chinensis HOM05D007602 ORTHO05D009086 1.0e-12 76.3 52 67.3
Thhalv10011932m.g Eutrema salsugineum HOM05D007602 ORTHO05D009086 1.3e-12 75.9 55 58.2
Aa31LG10G4570 Aethionema arabicum HOM05D007602 ORTHO05D009086 1.7e-12 75.5 56 64.3
ECA240G4508 Erigeron canadensis HOM05D007602 ORTHO05D009086 1.7e-12 75.5 53 62.3
TAR381G0702 Trochodendron aralioides HOM05D007602 ORTHO05D009086 5.0e-12 73.9 55 61.8
MD00G1073700 Malus domestica HOM05D007602 ORTHO05D009086 1.1e-11 72.8 51 64.7
BcaC07g37055 Brassica carinata HOM05D003421 ORTHO05D009086 7.3e-11 70.1 64 53.1
Sabra09G0084100 Salix brachista HOM05D007602 ORTHO05D009086 7.3e-11 70.1 44 72.7
Aa31LG8G5770 Aethionema arabicum HOM05D000086 ORTHO05D008850 9.5e-11 69.7 55 60.0
SGA_v2.0_scaffold32G13134 Striga asiatica HOM05D000790 ORTHO05D000769 1.6e-10 68.9 50 68.0
unitig_21.g20769 Utricularia gibba HOM05D007602 ORTHO05D009086 2.1e-10 68.6 40 77.5
Sopen10g022680 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-10 67.4 41 70.7
HPP92_000754 Vanilla planifolia HOM05D001821 ORTHO05D009086 8.0e-10 66.6 55 54.5
AUR62037762 Chenopodium quinoa HOM05D007602 ORTHO05D009086 1.4e-09 65.9 44 65.9
Atru.chr12.1346 Acer truncatum HOM05D007602 ORTHO05D009086 1.8e-09 65.5 44 61.4
MD11G1171200 Malus domestica HOM05D007602 ORTHO05D009086 5.2e-09 63.9 40 70.0
AUR62038779 Chenopodium quinoa HOM05D007602 ORTHO05D009086 8.9e-09 63.2 55 56.4
vmacro19447 Vaccinium macrocarpon HOM05D007602 ORTHO05D009086 1.5e-08 62.4 40 75.0
CSS0032371 Camellia sinensis var. sinensis HOM05D007602 ORTHO05D009086 3.4e-08 61.2 35 77.1
Ah.01g019750 Amaranthus hybridus HOM05D007602 ORTHO05D009086 1.7e-07 58.9 40 70.0
vmacro23386 Vaccinium macrocarpon HOM05D007602 ORTHO05D009086 3.7e-07 57.8 33 78.8
Nitab4.5_0003281g0040 Nicotiana tabacum HOM05D007602 ORTHO05D009086 1.4e-06 55.8 35 68.6
Nitab4.5_0003816g0110 Nicotiana tabacum HOM05D007602 ORTHO05D009086 1.4e-06 55.8 35 68.6
Peaxi162Scf00016g01124 Petunia axillaris HOM05D007602 ORTHO05D009086 1.9e-06 55.5 34 70.6
Pp3c6_6800 Physcomitrium patens HOM05D007602 ORTHO05D009086 1.9e-06 55.5 54 46.3
SHI05446 Sapria himalayana HOM05D007602 ORTHO05D009086 2.4e-06 55.1 36 66.7
AUR62038947 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.1e-06 54.3 37 64.9


User provided reference genes

Program Settings