Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C81G33 Lonicera japonica HOM05D013739 ORTHO05D013231 1.1e-32 143.3 66 100.0
Lj2C317T13 Lonicera japonica HOM05D013739 ORTHO05D013231 7.8e-31 137.1 66 95.5
Lj8C459T6 Lonicera japonica HOM05D013739 ORTHO05D013231 7.8e-31 137.1 66 95.5
Lj8A259T66 Lonicera japonica HOM05D013739 ORTHO05D013231 1.0e-30 136.7 66 95.5
QL02p073961 Quercus lobata HOM05D000023 ORTHO05D000014 1.1e-16 90.1 62 71.0
QL03p002046 Quercus lobata HOM05D000023 ORTHO05D000014 1.1e-16 90.1 62 71.0
QL03p002053 Quercus lobata HOM05D000023 ORTHO05D000014 1.1e-16 90.1 62 71.0
QL02p021831 Quercus lobata HOM05D013739 ORTHO05D013231 1.4e-16 89.7 62 71.0
ECA233G2344 Erigeron canadensis HOM05D000023 ORTHO05D000014 3.2e-16 88.6 58 75.9
QL05p032238 Quercus lobata HOM05D013739 ORTHO05D013231 7.1e-16 87.4 62 69.4
Rhsim01G0133300 Rhododendron simsii HOM05D013739 ORTHO05D013231 2.1e-15 85.9 71 63.4
CSS0002592 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.7e-15 85.5 66 68.2
CSS0032915 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.7e-15 85.5 66 68.2
CSS0046454 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.7e-15 85.5 66 68.2
Rhsim04G0045100 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.0e-15 84.3 60 70.0
CSS0001857 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.0e-14 82.0 67 61.2
CSS0002067 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.0e-14 82.0 67 61.2
PSO541G5902 Papaver somniferum HOM05D000023 ORTHO05D000014 2.5e-13 79.0 68 57.4
vmacro07091 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 2.5e-13 79.0 50 70.0
Rhsim12G0154800 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.4e-13 77.4 70 57.1
Rhsim08G0130700 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.6e-12 76.3 70 55.7
Rhsim13G0053900 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.8e-12 74.7 65 58.5
ECA234G2706 Erigeron canadensis HOM05D000023 ORTHO05D000014 1.1e-11 73.6 58 63.8
Rhsim04G0154000 Rhododendron simsii HOM05D013739 ORTHO05D013231 9.0e-11 70.5 70 51.4
vmacro08792 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 1.2e-10 70.1 39 74.4
vmacro08793 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 1.2e-10 70.1 39 74.4
vmacro07103 Vaccinium macrocarpon HOM05D013739 ORTHO05D013231 5.8e-10 67.8 40 70.0
Rhsim01G0133500 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-08 63.5 70 50.0
Lj6g0020030 Lotus japonicus HOM05D000023 ORTHO05D000014 1.0e-06 57.0 49 61.2
Lj7A259G18 Lonicera japonica HOM05D001920 ORTHO05D004895 6.7e-06 54.3 25 100.0


User provided reference genes

Program Settings