Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C79G1 Lonicera japonica HOM05D007920 ORTHO05D009993 5.4e-54 214.2 115 100.0
Hma1.2p1_0109F.1_g052370 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 7.6e-40 167.2 116 77.6
Sopen03g035960 Solanum pennellii HOM05D007920 ORTHO05D009993 5.1e-36 154.5 115 69.6
Nitab4.5_0012943g0020 Nicotiana tabacum HOM05D007920 ORTHO05D009993 5.6e-35 151.0 115 68.7
PGSC0003DMG400014190 Solanum tuberosum HOM05D007920 ORTHO05D009993 2.1e-34 149.1 115 67.0
SalBow6G4591 Salvia bowleyana HOM05D007920 ORTHO05D009993 2.8e-34 148.7 117 68.4
SalBow6G6899 Salvia bowleyana HOM05D007920 ORTHO05D009993 3.7e-34 148.3 117 68.4
Rhsim12G0188100 Rhododendron simsii HOM05D007920 ORTHO05D009993 1.4e-33 146.4 115 67.0
Migut.D01101 Erythranthe guttata HOM05D007920 ORTHO05D009993 2.4e-33 145.6 115 67.8
Nitab4.5_0001454g0110 Nicotiana tabacum HOM05D001080 ORTHO05D009993 2.4e-33 145.6 112 66.1
Actinidia36878 Actinidia chinensis HOM05D007920 ORTHO05D009993 5.3e-33 144.4 115 67.8
TAR383G1062 Trochodendron aralioides HOM05D007920 ORTHO05D009993 2.6e-32 142.1 115 65.2
MSTRG.9407 Avicennia marina HOM05D007920 ORTHO05D009993 3.2e-30 135.2 117 65.0
Nn8g39812 Nelumbo nucifera HOM05D007920 ORTHO05D009993 4.2e-30 134.8 115 63.5
CANSAT56G1317 Cannabis sativa HOM05D007920 ORTHO05D009993 7.1e-30 134.0 115 62.6
Cc04_g04970 Coffea canephora HOM05D007920 ORTHO05D009993 7.1e-30 134.0 117 62.4
HanXRQChr09g0274501 Helianthus annuus HOM05D007920 ORTHO05D009993 1.2e-29 133.3 115 60.9
Lsat_1_v5_gn_4_87000 Lactuca sativa HOM05D007920 ORTHO05D009993 1.2e-29 133.3 116 64.7
Oeu060125.1 Olea europaea HOM05D007920 ORTHO05D009993 1.6e-29 132.9 117 63.2
SGA_v2.0_scaffold117G32314 Striga asiatica HOM05D007920 ORTHO05D009993 1.6e-29 132.9 116 63.8
HanXRQChr05g0154421 Helianthus annuus HOM05D007920 ORTHO05D009993 3.0e-28 128.6 115 59.1
Prupe.3G096700 Prunus persica HOM05D007920 ORTHO05D009993 1.9e-27 125.9 115 60.9
CSS0007854 Camellia sinensis var. sinensis HOM05D007920 ORTHO05D009993 4.3e-27 124.8 98 68.4
FAN09G3519 Fragaria x ananassa HOM05D007920 ORTHO05D009993 7.4e-27 124.0 115 57.4
Cpa.g.sc10.92 Carica papaya HOM05D007920 ORTHO05D009993 1.3e-26 123.2 93 68.8
FvH4_6g28800 Fragaria vesca HOM05D007920 ORTHO05D009993 1.3e-26 123.2 115 56.5
FAN05G5030 Fragaria x ananassa HOM05D007920 ORTHO05D009993 1.6e-26 122.9 115 56.5
TWI12G0021 Tripterygium wilfordii HOM05D007920 ORTHO05D009993 1.6e-26 122.9 90 70.0
Manes.11G065050 Manihot esculenta HOM05D007920 ORTHO05D009993 2.1e-26 122.5 91 70.3
QL05p035351 Quercus lobata HOM05D007920 ORTHO05D009993 2.8e-26 122.1 103 62.1
CARHR016410 Cardamine hirsuta HOM05D007920 ORTHO05D009993 4.8e-26 121.3 107 62.6
FAN02G0847 Fragaria x ananassa HOM05D007920 ORTHO05D009993 6.3e-26 120.9 115 55.7
AL1G28072 Arabidopsis lyrata HOM05D007920 ORTHO05D009993 1.1e-25 120.2 100 65.0
Aqoxy7G03460 Aquilegia oxysepala HOM05D007920 ORTHO05D009993 1.4e-25 119.8 116 58.6
AT1G15900 Arabidopsis thaliana HOM05D007920 ORTHO05D009993 1.4e-25 119.8 97 68.0
MD17G1221700 Malus domestica HOM05D007920 ORTHO05D009993 2.4e-25 119.0 115 56.5
MELO3C017832.2 Cucumis melo HOM05D007920 ORTHO05D009993 6.9e-25 117.5 106 59.4
PGR031G3888 Punica granatum HOM05D007920 ORTHO05D009993 6.9e-25 117.5 118 58.5
RcHm_v2.0_Chr2g0133221 Rosa chinensis HOM05D007920 ORTHO05D009993 6.9e-25 117.5 92 65.2
ClCG07G012110 Citrullus lanatus HOM05D007920 ORTHO05D009993 9.0e-25 117.1 116 56.0
Sp1g14205 Schrenkiella parvula HOM05D007920 ORTHO05D009993 9.0e-25 117.1 102 63.7
Thecc.06G039600 Theobroma cacao HOM05D007920 ORTHO05D009993 9.0e-25 117.1 110 60.9
BraA06t24364Z Brassica rapa HOM05D000537 ORTHO05D000415 1.2e-24 116.7 95 65.3
A06p11940 Brassica napus HOM05D000537 ORTHO05D000415 1.5e-24 116.3 95 65.3
Aa31LG7G480 Aethionema arabicum HOM05D007920 ORTHO05D009993 2.0e-24 115.9 107 60.7
C05p14120 Brassica napus HOM05D000537 ORTHO05D000415 2.0e-24 115.9 100 63.0
BolC5t30143H Brassica oleracea HOM05D000537 ORTHO05D000415 2.0e-24 115.9 100 63.0
ClCG00G003920 Citrullus lanatus HOM05D007920 ORTHO05D009993 2.0e-24 115.9 91 65.9
Thhalv10009838m.g Eutrema salsugineum HOM05D007920 ORTHO05D009993 2.0e-24 115.9 102 62.7
Potri.001G046900 Populus trichocarpa HOM05D007920 ORTHO05D009993 5.9e-24 114.4 93 65.6
Sabra01G0032500 Salix brachista HOM05D001994 ORTHO05D001954 5.9e-24 114.4 104 61.5
Gohir.D09G090800 Gossypium hirsutum HOM05D007920 ORTHO05D009993 7.6e-24 114.0 109 59.6
Gorai.006G107000 Gossypium raimondii HOM05D007920 ORTHO05D009993 7.6e-24 114.0 114 58.8
Carub.0001s1570 Capsella rubella HOM05D007920 ORTHO05D009993 1.0e-23 113.6 91 65.9
CsaV3_4G002040 Cucumis sativus L. HOM05D001994 ORTHO05D001954 1.0e-23 113.6 89 64.0
Ca_01022_v3 Cicer arietinum L. HOM05D007920 ORTHO05D009993 5.0e-23 111.3 102 56.9
Ciclev10026801m.g Citrus clementina HOM05D007920 ORTHO05D009993 8.4e-23 110.5 105 58.1
ECA232G4957 Erigeron canadensis HOM05D007920 ORTHO05D009993 1.1e-22 110.2 114 50.0
Gohir.A09G090800 Gossypium hirsutum HOM05D007920 ORTHO05D009993 1.1e-22 110.2 109 58.7
Duzib192G0651 Durio zibethinus HOM05D007920 ORTHO05D009993 1.4e-22 109.8 92 63.0
unitig_736.g22804 Utricularia gibba HOM05D000537 ORTHO05D000776 1.4e-22 109.8 97 55.7
Sed0007883 Sechium edule HOM05D001994 ORTHO05D001954 1.9e-22 109.4 114 50.9
THA.LOC104808181 Tarenaya hassleriana HOM05D007920 ORTHO05D009993 2.5e-22 109.0 107 57.0
Cfa000225 Carpinus fangiana HOM05D007920 ORTHO05D009993 3.2e-22 108.6 87 64.4
CiPaw.01G253600 Carya illinoinensis HOM05D007920 ORTHO05D009993 4.2e-22 108.2 86 66.3
ATR0559G078 Amborella trichopoda HOM05D007920 ORTHO05D009993 1.2e-21 106.7 96 57.3
Lj3g0004979 Lotus japonicus HOM05D007920 ORTHO05D009993 2.1e-21 105.9 93 60.2
Medtr2g104930 Medicago truncatula HOM05D007920 ORTHO05D009993 2.1e-21 105.9 101 53.5
Lalb_Chr24g0395321 Lupinus albus HOM05D007920 ORTHO05D009993 2.7e-21 105.5 94 61.7
SHI00232 Sapria himalayana HOM05D007920 ORTHO05D009993 2.7e-21 105.5 90 60.0
Sc12g0008420 Simmondsia chinensis HOM05D007920 ORTHO05D009993 3.5e-21 105.1 103 53.4
Lalb_Chr14g0374051 Lupinus albus HOM05D007920 ORTHO05D009993 1.3e-20 103.2 92 64.1
Psat5g304800 Pisum sativum HOM05D007920 ORTHO05D009993 2.3e-20 102.4 100 53.0
FAN14G5942 Fragaria x ananassa HOM05D007920 ORTHO05D009993 3.0e-20 102.1 114 50.9
HPP92_000037 Vanilla planifolia HOM05D001122 ORTHO05D001877 8.7e-20 100.5 98 55.1
arahy.Tifrunner.gnm1.ann1.D8WECR Arachis hypogaea HOM05D007920 ORTHO05D009993 3.3e-19 98.6 90 58.9
Glyma.15G004000 Glycine max HOM05D007920 ORTHO05D009993 5.7e-19 97.8 91 58.2
VMungo1080G1626 Vigna mungo HOM05D007920 ORTHO05D009993 9.0e-17 90.5 119 50.4
Ah.01g006840 Amaranthus hybridus HOM05D007920 ORTHO05D009993 2.6e-16 89.0 103 47.6
Zm00001eb278260 Zea mays HOM05D007920 ORTHO05D009993 7.7e-16 87.4 86 58.1
COL.COLO4_26676 Corchorus olitorius HOM05D007920 ORTHO05D009993 1.7e-15 86.3 86 59.3
Phvul.005G182500 Phaseolus vulgaris HOM05D007920 ORTHO05D009993 1.7e-15 86.3 111 50.5
Sc02g0006940 Simmondsia chinensis HOM05D007920 ORTHO05D009993 6.5e-15 84.3 100 47.0
SEGI_11378 Sequoiadendron giganteum HOM05D007920 ORTHO05D009993 1.8e-12 76.3 93 49.5
TPR.G36324 Trifolium pratense HOM05D007920 ORTHO05D009993 3.0e-12 75.5 88 48.9
Mapoly0046s0029 Marchantia polymorpha HOM05D007920 ORTHO05D009993 3.9e-12 75.1 83 51.8
MD16G1196200 Malus domestica HOM05D007920 ORTHO05D009993 2.8e-10 68.9 85 48.2
Hma1.2p1_0586F.1_g183770 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 4.1e-09 65.1 74 51.4
Hma1.2p1_1595F.1_g292725 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 5.0e-07 58.2 55 60.0


User provided reference genes

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