Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C778G0 Lonicera japonica HOM05D001015 ORTHO05D036492 3.8e-45 184.5 94 100.0
Lj5A775G26 Lonicera japonica HOM05D001015 ORTHO05D036492 2.0e-22 109.0 61 90.2
Lj8A108T64 Lonicera japonica HOM05D001015 ORTHO05D000881 1.9e-17 92.4 61 78.7
Lj5C772G4 Lonicera japonica HOM05D001015 ORTHO05D036492 1.5e-14 82.8 60 71.7
Dinv06864 Davidia involucrata HOM05D001015 ORTHO05D000881 9.7e-09 63.5 49 67.3
RcHm_v2.0_Chr2g0127301 Rosa chinensis HOM05D001015 ORTHO05D000881 6.3e-08 60.8 75 46.7
GSVIVG01020596001 Vitis vinifera HOM05D001015 ORTHO05D000881 1.8e-07 59.3 69 53.6
TPR.G11766 Trifolium pratense HOM05D001015 ORTHO05D000881 2.4e-07 58.9 71 45.1
arahy.Tifrunner.gnm1.ann1.PMQ43S Arachis hypogaea HOM05D001015 ORTHO05D000881 5.3e-07 57.8 41 68.3
arahy.Tifrunner.gnm1.ann1.W02GTP Arachis hypogaea HOM05D001015 ORTHO05D000881 5.3e-07 57.8 41 68.3
BcaC06g32622 Brassica carinata HOM05D001015 ORTHO05D000881 9.1e-07 57.0 60 51.7
C07p56210 Brassica napus HOM05D001015 ORTHO05D000881 9.1e-07 57.0 60 51.7
BolC7t46098H Brassica oleracea HOM05D001015 ORTHO05D000881 9.1e-07 57.0 60 51.7
Lj3g0019868 Lotus japonicus HOM05D001015 ORTHO05D000881 9.1e-07 57.0 60 51.7
AUR62036049 Chenopodium quinoa HOM05D001015 ORTHO05D000881 1.2e-06 56.6 61 54.1
AUR62038981 Chenopodium quinoa HOM05D001015 ORTHO05D000881 1.2e-06 56.6 58 55.2
Duzib160G0704 Durio zibethinus HOM05D001015 ORTHO05D000881 1.2e-06 56.6 49 61.2
A03p58090 Brassica napus HOM05D001015 ORTHO05D000881 1.5e-06 56.2 60 51.7
BraA03t14875Z Brassica rapa HOM05D001015 ORTHO05D000881 1.5e-06 56.2 60 51.7
MBI07_g29114_MAGBIO Magnolia biondii HOM05D001015 ORTHO05D000881 1.5e-06 56.2 48 58.3
AL1G13370 Arabidopsis lyrata HOM05D001015 ORTHO05D000881 2.0e-06 55.8 61 45.9
BcaNung01566 Brassica carinata HOM05D001015 ORTHO05D000881 2.0e-06 55.8 54 53.7
Haze_13232 Corylus avellana HOM05D001015 ORTHO05D000881 2.0e-06 55.8 42 69.0
arahy.Tifrunner.gnm1.ann1.1SZ2FT Arachis hypogaea HOM05D001015 ORTHO05D000881 2.6e-06 55.5 49 61.2
arahy.Tifrunner.gnm1.ann1.ZB2C9Z Arachis hypogaea HOM05D001015 ORTHO05D000881 2.6e-06 55.5 49 61.2
EL10Ac9g20808 Beta vulgaris HOM05D001015 ORTHO05D000881 2.6e-06 55.5 68 50.0
Cfa014655 Carpinus fangiana HOM05D001015 ORTHO05D000881 2.6e-06 55.5 44 65.9
Hma1.2p1_0002F.1_g002180 Hydrangea macrophylla HOM05D001015 ORTHO05D000881 2.6e-06 55.5 51 60.8
PSO832G0788 Papaver somniferum HOM05D001015 ORTHO05D000881 2.6e-06 55.5 52 53.8
Aa31LG1G9010 Aethionema arabicum HOM05D001015 ORTHO05D000881 3.4e-06 55.1 40 62.5
BcaC09g51646 Brassica carinata HOM05D001015 ORTHO05D000881 3.4e-06 55.1 47 57.4
C01p11050 Brassica napus HOM05D001015 ORTHO05D000881 3.4e-06 55.1 47 57.4
CANSAT64G0132 Cannabis sativa HOM05D001015 ORTHO05D000881 3.4e-06 55.1 55 58.2
Ciclev10017022m.g Citrus clementina HOM05D001015 ORTHO05D000881 3.4e-06 55.1 43 55.8
Ciclev10017101m.g Citrus clementina HOM05D001015 ORTHO05D000881 3.4e-06 55.1 78 47.4
Glyma.12G206200 Glycine max HOM05D001015 ORTHO05D000881 3.4e-06 55.1 35 74.3
Glyma.13G294700 Glycine max HOM05D001015 ORTHO05D000881 3.4e-06 55.1 35 74.3
Psat5g273520 Pisum sativum HOM05D001015 ORTHO05D000881 3.4e-06 55.1 40 70.0
Hund07913 Selenicereus undatus HOM05D001015 ORTHO05D000881 3.4e-06 55.1 68 48.5
TWI23G1299 Tripterygium wilfordii HOM05D001015 ORTHO05D000881 3.4e-06 55.1 73 45.2
AT1G03810 Arabidopsis thaliana HOM05D001015 ORTHO05D000881 4.5e-06 54.7 62 46.8
Eucgr.A01855 Eucalyptus grandis HOM05D001015 ORTHO05D000881 4.5e-06 54.7 51 58.8
Nn1g06428 Nelumbo nucifera HOM05D001015 ORTHO05D000881 4.5e-06 54.7 67 50.7
PSO210G4184 Papaver somniferum HOM05D001015 ORTHO05D000881 4.5e-06 54.7 52 53.8
Peaxi162Scf00059g00919 Petunia axillaris HOM05D001015 ORTHO05D000881 4.5e-06 54.7 46 58.7
Atru.chr6.2878 Acer truncatum HOM05D001015 ORTHO05D000881 5.9e-06 54.3 71 47.9
HanXRQChr15g0474551 Helianthus annuus HOM05D001015 ORTHO05D000881 5.9e-06 54.3 44 63.6
Atru.chr6.2939 Acer truncatum HOM05D001015 ORTHO05D000881 7.7e-06 53.9 32 75.0
Ah.01g015410 Amaranthus hybridus HOM05D001015 ORTHO05D000881 7.7e-06 53.9 65 50.8
BraA01t00892Z Brassica rapa HOM05D001015 ORTHO05D000881 7.7e-06 53.9 54 50.0
Dinv20208 Davidia involucrata HOM05D001015 ORTHO05D000881 7.7e-06 53.9 61 50.8
ECA246G0137 Erigeron canadensis HOM05D001015 ORTHO05D000881 7.7e-06 53.9 44 63.6
MBI16_g32802_MAGBIO Magnolia biondii HOM05D001015 ORTHO05D000881 7.7e-06 53.9 35 74.3
Phvul.005G101100 Phaseolus vulgaris HOM05D001015 ORTHO05D000881 7.7e-06 53.9 77 45.5
Prupe.3G134500 Prunus persica HOM05D001015 ORTHO05D000881 7.7e-06 53.9 61 50.8
TWI36G0839 Tripterygium wilfordii HOM05D001015 ORTHO05D000881 7.7e-06 53.9 36 69.4


User provided reference genes

Program Settings