Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.5e-65 253.1 166 100.0
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.1e-39 167.2 91 95.6
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.1e-39 167.2 91 95.6
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 5.4e-39 164.9 91 94.5
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 9.6e-36 154.1 91 84.6
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 2.8e-35 152.5 91 84.6
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 3.7e-35 152.1 91 83.5
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 6.2e-35 151.4 91 84.6
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 6.2e-35 151.4 91 82.4
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 8.1e-35 151.0 89 84.3
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.1e-34 150.6 91 82.4
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.1e-34 150.6 91 83.5
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.4e-34 150.2 91 81.3
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 1.8e-34 149.8 91 81.3
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.8e-34 149.8 91 82.4
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.4e-34 149.4 89 84.3
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.1e-34 149.1 90 81.1
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 3.1e-34 149.1 91 80.2
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 3.1e-34 149.1 91 82.4
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 3.1e-34 149.1 91 82.4
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 3.1e-34 149.1 91 83.5
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.0e-34 148.7 90 81.1
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.0e-34 148.7 90 81.1
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 4.0e-34 148.7 91 80.2
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 4.0e-34 148.7 91 81.3
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 4.0e-34 148.7 91 81.3
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 5.3e-34 148.3 91 81.3
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 5.3e-34 148.3 91 81.3
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 9.0e-34 147.5 91 80.2
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 9.0e-34 147.5 91 81.3
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 1.2e-33 147.1 89 80.9
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.2e-33 147.1 91 78.0
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 1.2e-33 147.1 91 80.2
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.2e-33 147.1 91 81.3
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.5e-33 146.7 91 81.3
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.5e-33 146.7 91 81.3
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 1.5e-33 146.7 91 80.2
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.5e-33 146.7 91 81.3
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 2.0e-33 146.4 91 82.4
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 2.0e-33 146.4 91 80.2
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 2.6e-33 146.0 91 79.1
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 2.6e-33 146.0 91 80.2
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 2.6e-33 146.0 91 82.4
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 2.6e-33 146.0 91 80.2
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.4e-33 145.6 91 81.3
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.4e-33 145.6 91 81.3
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.4e-33 145.6 91 81.3
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.4e-33 145.6 91 81.3
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 3.4e-33 145.6 91 79.1
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 4.5e-33 145.2 91 79.1
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.5e-33 145.2 91 80.2
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 4.5e-33 145.2 91 80.2
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 4.5e-33 145.2 91 81.3
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.5e-33 145.2 91 79.1
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 5.8e-33 144.8 89 78.7
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 5.8e-33 144.8 91 78.0
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 7.6e-33 144.4 91 79.1
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 7.6e-33 144.4 91 79.1
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.0e-32 144.1 91 79.1
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.3e-32 143.7 90 77.8
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 1.3e-32 143.7 91 79.1
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.2e-32 142.9 91 75.8
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 2.2e-32 142.9 89 78.7
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.9e-32 142.5 90 78.9
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.9e-32 142.5 90 78.9
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.8e-32 142.1 91 78.0
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 3.8e-32 142.1 90 78.9
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 3.8e-32 142.1 91 75.8
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 3.8e-32 142.1 91 76.9
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 4.9e-32 141.7 91 78.0
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.5e-32 141.4 86 81.4
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 6.5e-32 141.4 91 80.2
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 6.5e-32 141.4 91 78.0
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 8.4e-32 141.0 91 76.9
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.1e-31 140.6 91 74.7
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.4e-31 140.2 91 75.8
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.4e-31 140.2 89 77.5
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.9e-31 139.8 89 76.4
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 1.9e-31 139.8 91 75.8
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 2.5e-31 139.4 91 74.7
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 2.5e-31 139.4 91 76.9
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-31 139.0 91 75.8
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-31 139.0 91 75.8
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-31 139.0 91 75.8
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 4.2e-31 138.7 91 74.7
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 4.2e-31 138.7 91 74.7
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.2e-31 138.7 91 74.7
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 5.5e-31 138.3 89 76.4
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 7.1e-31 137.9 89 76.4
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 7.1e-31 137.9 91 74.7
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 7.1e-31 137.9 91 74.7
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 9.3e-31 137.5 91 74.7
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.2e-30 137.1 91 73.6
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.2e-30 137.1 91 73.6
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.2e-30 137.1 91 73.6
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 1.2e-30 137.1 91 73.6
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.2e-30 137.1 89 74.2
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.6e-30 136.7 91 72.5
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 2.7e-30 136.0 91 72.5
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 2.7e-30 136.0 91 72.5
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 3.5e-30 135.6 89 75.3
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.6e-30 135.2 91 74.7
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 7.9e-30 134.4 91 72.5
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 3.9e-29 132.1 89 71.9
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 5.1e-29 131.7 92 75.0
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 5.1e-29 131.7 88 72.7
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 6.7e-29 131.3 89 73.0
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 8.7e-29 131.0 79 82.3
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 7.4e-28 127.9 89 70.8
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 9.6e-28 127.5 76 82.9
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.1e-27 126.3 79 75.9
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 2.8e-27 125.9 78 76.9
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 4.8e-27 125.2 91 68.1
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 6.2e-27 124.8 79 78.5
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 2.4e-26 122.9 91 67.0
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 2.4e-26 122.9 91 64.8
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 2.0e-25 119.8 76 76.3
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.6e-25 119.4 70 80.0
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 4.5e-25 118.6 91 59.3
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.0e-24 117.5 74 74.3
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.2e-24 116.3 76 72.4
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.8e-24 115.5 68 80.9
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 2.5e-20 102.8 87 62.1
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.1e-18 97.4 64 73.4
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.0e-16 90.9 91 46.2
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 7.2e-07 58.2 95 43.2
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 9.4e-07 57.8 41 68.3


User provided reference genes

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