Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C430G7 Lonicera japonica HOM05D007570 ORTHO05D009365 2.2e-86 322.4 182 100.0
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 4.1e-48 195.3 107 91.6
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 1.2e-15 87.4 112 44.6
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 2.1e-15 86.7 140 39.3
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 1.8e-14 83.6 188 31.9
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 2.3e-14 83.2 100 49.0
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 3.9e-14 82.4 85 48.2
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 5.1e-14 82.0 102 51.0
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 1.1e-13 80.9 176 34.7
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 1.1e-13 80.9 121 39.7
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 1.5e-13 80.5 136 36.8
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.9e-13 80.1 132 39.4
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 1.9e-13 80.1 89 49.4
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 1.9e-13 80.1 121 40.5
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 2.5e-13 79.7 160 32.5
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 3.3e-13 79.3 81 56.8
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 3.3e-13 79.3 121 39.7
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 4.3e-13 79.0 132 39.4
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 4.3e-13 79.0 123 39.0
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 4.3e-13 79.0 132 34.8
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 5.6e-13 78.6 125 40.0
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 7.4e-13 78.2 142 38.7
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 7.4e-13 78.2 160 33.1
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 9.6e-13 77.8 81 55.6
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 1.6e-12 77.0 77 51.9
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 2.8e-12 76.3 93 44.1
SalBow3G3428 Salvia bowleyana HOM05D007570 ORTHO05D009365 2.8e-12 76.3 113 38.1
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 3.6e-12 75.9 159 35.2
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 3.6e-12 75.9 101 42.6
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 3.6e-12 75.9 101 42.6
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 4.8e-12 75.5 140 37.1
HanXRQChr10g0294781 Helianthus annuus HOM05D007570 ORTHO05D009365 6.2e-12 75.1 130 38.5
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 6.2e-12 75.1 106 41.5
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 8.1e-12 74.7 139 34.5
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 1.1e-11 74.3 76 53.9
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 1.8e-11 73.6 150 32.7
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 1.8e-11 73.6 145 36.6
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 1.8e-11 73.6 146 37.0
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.8e-11 73.6 179 34.1
FAN03G2441 Fragaria x ananassa HOM05D002709 ORTHO05D002914 2.4e-11 73.2 92 44.6
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 3.1e-11 72.8 94 47.9
FAN10G3422 Fragaria x ananassa HOM05D007570 ORTHO05D009365 4.0e-11 72.4 89 46.1
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 5.3e-11 72.0 142 34.5
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 6.9e-11 71.6 95 45.3
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 6.9e-11 71.6 129 34.9
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 6.9e-11 71.6 130 36.2
HPP92_020822 Vanilla planifolia HOM05D007570 ORTHO05D009365 9.0e-11 71.2 73 49.3
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 1.5e-10 70.5 124 37.1
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 1.5e-10 70.5 63 55.6
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 1.5e-10 70.5 63 55.6
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 2.0e-10 70.1 90 44.4
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 2.6e-10 69.7 77 53.2
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 2.6e-10 69.7 77 53.2
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 2.6e-10 69.7 57 56.1
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 2.6e-10 69.7 89 44.9
MD00G1202400 Malus domestica HOM05D007570 ORTHO05D009365 3.4e-10 69.3 93 44.1
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 5.8e-10 68.6 57 57.9
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 5.8e-10 68.6 59 52.5
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 7.6e-10 68.2 60 53.3
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 1.7e-09 67.0 139 38.1
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 2.9e-09 66.2 136 34.6
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 4.9e-09 65.5 101 39.6
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 5.5e-08 62.0 162 29.0
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 9.3e-08 61.2 58 51.7
TAR625G0236 Trochodendron aralioides HOM05D007570 ORTHO05D009365 2.7e-07 59.7 74 41.9
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 4.6e-07 58.9 93 40.9
Carub.0006s1294 Capsella rubella HOM05D007570 ORTHO05D009365 1.0e-06 57.8 95 34.7
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 5.1e-06 55.5 55 47.3
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 5.1e-06 55.5 66 45.5


User provided reference genes

Program Settings