Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C364G3 Lonicera japonica HOM05D000101 ORTHO05D003282 7.8e-42 173.3 84 100.0
Lj5A361T45 Lonicera japonica HOM05D000101 ORTHO05D003282 3.4e-29 131.3 71 85.9
Lj5C367T1 Lonicera japonica HOM05D000101 ORTHO05D003282 3.4e-29 131.3 71 85.9
Lj5P366T9 Lonicera japonica HOM05D000101 ORTHO05D003282 4.9e-28 127.5 68 86.8
Lj5C359T4 Lonicera japonica HOM05D000101 ORTHO05D003282 3.7e-20 101.3 69 69.6
Lj5C375T0 Lonicera japonica HOM05D000101 ORTHO05D003282 7.3e-16 87.0 75 58.7
Duzib205G1449 Durio zibethinus HOM05D000101 ORTHO05D003282 2.4e-14 82.0 77 48.1
Lj5P602T19 Lonicera japonica HOM05D000101 ORTHO05D003282 2.0e-13 79.0 75 46.7
Lj5P606T11 Lonicera japonica HOM05D000101 ORTHO05D003282 2.6e-13 78.6 75 46.7
Lj5P276T58 Lonicera japonica HOM05D000101 ORTHO05D003282 3.8e-12 74.7 72 48.6
Lj5A368T45 Lonicera japonica HOM05D000101 ORTHO05D003282 6.4e-12 73.9 69 50.7
Lj4g0017827 Lotus japonicus HOM05D000101 ORTHO05D003282 6.4e-12 73.9 81 42.0
Actinidia26187 Actinidia chinensis HOM05D000101 ORTHO05D003282 1.1e-11 73.2 78 41.0
Lj5C276T11 Lonicera japonica HOM05D000101 ORTHO05D003282 1.9e-11 72.4 72 47.2
Lj5P278T58 Lonicera japonica HOM05D000101 ORTHO05D003282 1.9e-11 72.4 72 47.2
Lj5P280T38 Lonicera japonica HOM05D000101 ORTHO05D003282 1.9e-11 72.4 72 47.2
Thecc.03G111000 Theobroma cacao HOM05D000101 ORTHO05D003282 1.9e-11 72.4 77 44.2
Actinidia38979 Actinidia chinensis HOM05D000101 ORTHO05D003282 3.2e-11 71.6 80 41.2
COL.COLO4_28824 Corchorus olitorius HOM05D000101 ORTHO05D003282 3.2e-11 71.6 75 45.3
Gohir.A07G057900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 4.1e-11 71.2 75 44.0
Gorai.001G066200 Gossypium raimondii HOM05D000101 ORTHO05D003282 4.1e-11 71.2 75 44.0
Gohir.D07G062700 Gossypium hirsutum HOM05D000101 ORTHO05D003282 5.4e-11 70.9 75 44.0
Lj5C363T1 Lonicera japonica HOM05D000101 ORTHO05D003282 1.2e-10 69.7 71 47.9
Glyma.08G123300 Glycine max HOM05D000101 ORTHO05D003282 2.1e-10 68.9 78 42.3
Eucgr.G00112 Eucalyptus grandis HOM05D000101 ORTHO05D003282 7.8e-10 67.0 72 41.7
Eucgr.G00160 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.0e-09 66.6 78 39.7
HanXRQChr03g0065841 Helianthus annuus HOM05D000101 ORTHO05D003282 1.0e-09 66.6 77 44.2
Rhsim11G0062300 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.3e-09 66.2 76 43.4
DCAR_001710 Daucus carota HOM05D000101 ORTHO05D003282 1.7e-09 65.9 78 38.5
Glyma.05G165600 Glycine max HOM05D000101 ORTHO05D003282 1.7e-09 65.9 74 41.9
Dinv29663 Davidia involucrata HOM05D000101 ORTHO05D003282 5.1e-09 64.3 66 45.5
RhsimUnG0032200 Rhododendron simsii HOM05D000101 ORTHO05D003282 5.1e-09 64.3 78 39.7
Lj5A279T40 Lonicera japonica HOM05D000101 ORTHO05D003282 6.6e-09 63.9 67 46.3
Lj5A271T96 Lonicera japonica HOM05D000101 ORTHO05D003282 8.7e-09 63.5 75 44.0
TAR624G1018 Trochodendron aralioides HOM05D000101 ORTHO05D003282 1.1e-08 63.2 76 39.5
PGR042G3596 Punica granatum HOM05D000101 ORTHO05D003282 1.9e-08 62.4 78 39.7
VMungo0251G1948 Vigna mungo HOM05D000101 ORTHO05D003282 1.9e-08 62.4 78 38.5
Dinv29665 Davidia involucrata HOM05D000101 ORTHO05D003282 4.3e-08 61.2 73 37.0
Rhsim11G0119400 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.3e-08 61.2 78 38.5
Thecc.02G013100 Theobroma cacao HOM05D000101 ORTHO05D003282 4.3e-08 61.2 64 43.8
Eucgr.G00249 Eucalyptus grandis HOM05D000101 ORTHO05D003282 5.6e-08 60.8 81 42.0
Eucgr.J02649 Eucalyptus grandis HOM05D000101 ORTHO05D003282 5.6e-08 60.8 81 42.0
RhsimUnG0074400 Rhododendron simsii HOM05D000101 ORTHO05D003282 5.6e-08 60.8 78 37.2
Lsat_1_v5_gn_9_121401 Lactuca sativa HOM05D000101 ORTHO05D003282 7.3e-08 60.5 76 38.2
Lj5A273T45 Lonicera japonica HOM05D000101 ORTHO05D003282 9.6e-08 60.1 63 46.0
Lj5A364T42 Lonicera japonica HOM05D000101 ORTHO05D003282 9.6e-08 60.1 41 73.2
Nn1g09693 Nelumbo nucifera HOM05D000101 ORTHO05D003282 1.2e-07 59.7 73 37.0
QL02p102693 Quercus lobata HOM05D000101 ORTHO05D003282 1.2e-07 59.7 73 38.4
CSS0050315 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 2.1e-07 58.9 64 42.2
Lj5P276T14 Lonicera japonica HOM05D000101 ORTHO05D003282 2.1e-07 58.9 125 29.6
QL02p102345 Quercus lobata HOM05D000101 ORTHO05D003282 2.8e-07 58.5 72 38.9
QL02p102988 Quercus lobata HOM05D000101 ORTHO05D003282 2.8e-07 58.5 72 38.9
ATR1120G102 Amborella trichopoda HOM05D000101 ORTHO05D017265 3.6e-07 58.2 78 35.9
Lj5C275T1 Lonicera japonica HOM05D000101 ORTHO05D003282 3.6e-07 58.2 130 29.2
Rhsim11G0064400 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.7e-07 57.8 57 47.4
Gorai.002G019100 Gossypium raimondii HOM05D000101 ORTHO05D000089 6.2e-07 57.4 82 37.8
RhsimUnG0201900 Rhododendron simsii HOM05D000101 ORTHO05D003282 6.2e-07 57.4 78 35.9
QL02p102261 Quercus lobata HOM05D000101 ORTHO05D003282 8.1e-07 57.0 79 36.7
ATR1120G092 Amborella trichopoda HOM05D000101 ORTHO05D000089 1.1e-06 56.6 75 37.3
GSVIVG01023203001 Vitis vinifera HOM05D000101 ORTHO05D003282 1.1e-06 56.6 68 38.2
PGR044G0583 Punica granatum HOM05D000101 ORTHO05D000089 1.4e-06 56.2 60 41.7
ATR0037G066 Amborella trichopoda HOM05D000101 ORTHO05D000089 1.8e-06 55.8 78 35.9
Ciclev10018699m.g Citrus clementina HOM05D000101 ORTHO05D003282 2.4e-06 55.5 76 35.5
QL02p102193 Quercus lobata HOM05D000101 ORTHO05D003282 2.4e-06 55.5 78 39.7
QL02p102834 Quercus lobata HOM05D000101 ORTHO05D003282 2.4e-06 55.5 78 39.7
Rhsim11G0118800 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.4e-06 55.5 78 35.9
Thecc.02G013800 Theobroma cacao HOM05D000101 ORTHO05D003282 2.4e-06 55.5 75 36.0
RhsimUnG0074600 Rhododendron simsii HOM05D000101 ORTHO05D003282 3.1e-06 55.1 78 35.9
TAR365G0070 Trochodendron aralioides HOM05D000101 ORTHO05D000089 3.1e-06 55.1 73 38.4
Lj5A278T75 Lonicera japonica HOM05D000101 ORTHO05D003282 4.0e-06 54.7 56 42.9
Cfa026050 Carpinus fangiana HOM05D000101 ORTHO05D003282 5.2e-06 54.3 72 33.3
Dinv31613 Davidia involucrata HOM05D000101 ORTHO05D003282 5.2e-06 54.3 80 36.2
Gohir.A08G233500 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.2e-06 54.3 80 35.0
Gohir.D08G253700 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.2e-06 54.3 80 35.0
Gorai.004G270600 Gossypium raimondii HOM05D000101 ORTHO05D000089 5.2e-06 54.3 80 35.0
Dinv11894 Davidia involucrata HOM05D000101 ORTHO05D000089 9.0e-06 53.5 72 36.1
Duzib187G0797 Durio zibethinus HOM05D000101 ORTHO05D000089 9.0e-06 53.5 80 35.0
Gorai.002G018600 Gossypium raimondii HOM05D000101 ORTHO05D000089 9.0e-06 53.5 83 36.1
MBI18_g24147_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 9.0e-06 53.5 74 36.5


User provided reference genes

Program Settings