Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C350T1 Lonicera japonica HOM05D000042 ORTHO05D000980 1.9e-56 222.2 110 100.0
Lj4A213T41 Lonicera japonica HOM05D000042 ORTHO05D000980 1.4e-19 99.8 52 94.2
GSVIVG01018839001 Vitis vinifera HOM05D000042 ORTHO05D000980 5.2e-14 81.3 55 69.1
Actinidia21483 Actinidia chinensis HOM05D000042 ORTHO05D000980 6.9e-14 80.9 55 72.7
Nn6g32205 Nelumbo nucifera HOM05D000042 ORTHO05D000980 3.4e-13 78.6 55 67.3
Ciclev10026433m.g Citrus clementina HOM05D000042 ORTHO05D000980 7.6e-13 77.4 52 71.2
Nn5g29187 Nelumbo nucifera HOM05D000042 ORTHO05D000980 1.7e-12 76.3 55 61.8
Thecc.01G024600 Theobroma cacao HOM05D000042 ORTHO05D000980 1.7e-12 76.3 54 68.5
HPP92_012975 Vanilla planifolia HOM05D000042 ORTHO05D000980 2.9e-12 75.5 50 68.0
Cc07_g10310 Coffea canephora HOM05D000042 ORTHO05D000980 3.8e-12 75.1 71 56.3
Hma1.2p1_0266F.1_g106980 Hydrangea macrophylla HOM05D000042 ORTHO05D000980 3.8e-12 75.1 61 62.3
Sabra05G0097000 Salix brachista HOM05D002790 ORTHO05D003033 3.8e-12 75.1 60 61.7
Atru.chr3.754 Acer truncatum HOM05D000042 ORTHO05D000980 4.9e-12 74.7 55 65.5
Duzib147G1428 Durio zibethinus HOM05D000042 ORTHO05D000980 6.4e-12 74.3 69 56.5
Gohir.A12G061800 Gossypium hirsutum HOM05D000042 ORTHO05D000980 6.4e-12 74.3 55 67.3
HPP92_025424 Vanilla planifolia HOM05D000042 ORTHO05D000980 6.4e-12 74.3 53 64.2
QL06p034517 Quercus lobata HOM05D000042 ORTHO05D000980 8.4e-12 73.9 56 62.5
Gohir.A02G168900 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.4e-11 73.2 55 67.3
Gohir.D03G011100 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.4e-11 73.2 55 67.3
Gohir.D12G061700 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.4e-11 73.2 55 65.5
Gorai.003G011500 Gossypium raimondii HOM05D000042 ORTHO05D000980 1.4e-11 73.2 55 67.3
Potri.005G118000 Populus trichocarpa HOM05D000042 ORTHO05D000980 1.4e-11 73.2 60 61.7
MBI01_g08783_MAGBIO Magnolia biondii HOM05D000042 ORTHO05D000980 1.9e-11 72.8 51 62.7
Zm00001eb272490 Zea mays HOM05D000042 ORTHO05D000980 2.4e-11 72.4 50 68.0
Manes.02G100400 Manihot esculenta HOM05D000042 ORTHO05D000980 4.2e-11 71.6 55 63.6
Gorai.008G064900 Gossypium raimondii HOM05D000042 ORTHO05D000980 5.4e-11 71.2 54 64.8
Cpa.g.sc6.202 Carica papaya HOM05D000042 ORTHO05D000980 9.3e-11 70.5 55 61.8
HPP92_014459 Vanilla planifolia HOM05D000042 ORTHO05D000980 9.3e-11 70.5 49 65.3
MD15G1250200 Malus domestica HOM05D000042 ORTHO05D000980 1.6e-10 69.7 55 65.5
vmacro22102 Vaccinium macrocarpon HOM05D000042 ORTHO05D000980 1.6e-10 69.7 55 61.8
Duzib264G0358 Durio zibethinus HOM05D000042 ORTHO05D000980 2.1e-10 69.3 55 61.8
Cpa.g.sc6.199 Carica papaya HOM05D000042 ORTHO05D000980 2.7e-10 68.9 51 64.7
Os06g0712700 Oryza sativa ssp. japonica HOM05D000042 ORTHO05D000980 3.5e-10 68.6 50 64.0
Prupe.7G164100 Prunus persica HOM05D000042 ORTHO05D000980 3.5e-10 68.6 55 63.6
CSS0036789 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000980 4.6e-10 68.2 52 65.4
Hma1.2p1_0773F.1_g216110 Hydrangea macrophylla HOM05D000042 ORTHO05D000980 6.0e-10 67.8 66 54.5
Potri.007G017000 Populus trichocarpa HOM05D000042 ORTHO05D000980 7.8e-10 67.4 52 63.5
Manes.01G141900 Manihot esculenta HOM05D000042 ORTHO05D000980 1.0e-09 67.0 55 58.2
COL.COLO4_21979 Corchorus olitorius HOM05D000042 ORTHO05D000980 1.3e-09 66.6 55 58.2
Lsat_1_v5_gn_3_75340 Lactuca sativa HOM05D000042 ORTHO05D000980 1.3e-09 66.6 56 60.7
ECA246G2311 Erigeron canadensis HOM05D000042 ORTHO05D000980 1.7e-09 66.2 53 60.4
Nn1g00156 Nelumbo nucifera HOM05D000042 ORTHO05D000980 1.7e-09 66.2 56 58.9
HanXRQChr16g0530971 Helianthus annuus HOM05D000042 ORTHO05D000980 3.0e-09 65.5 56 58.9
MD02G1136500 Malus domestica HOM05D000042 ORTHO05D000980 3.9e-09 65.1 55 60.0
Duzib093G1295 Durio zibethinus HOM05D000042 ORTHO05D000980 5.1e-09 64.7 52 57.7
MELO3C003778.2 Cucumis melo HOM05D000042 ORTHO05D000980 8.7e-09 63.9 56 55.4
CsaV3_3G045590 Cucumis sativus L. HOM05D000042 ORTHO05D000980 8.7e-09 63.9 56 55.4
Gorai.009G408900 Gossypium raimondii HOM05D021096 ORTHO05D020782 8.7e-09 63.9 64 54.7
Nitab4.5_0002266g0060 Nicotiana tabacum HOM05D000042 ORTHO05D000980 1.1e-08 63.5 54 57.4
GSVIVG01009815001 Vitis vinifera HOM05D000042 ORTHO05D000980 1.1e-08 63.5 52 55.8
PSO675G1650 Papaver somniferum HOM05D000042 ORTHO05D000980 1.5e-08 63.2 59 47.5
Peaxi162Scf00083g01812 Petunia axillaris HOM05D000042 ORTHO05D000980 1.5e-08 63.2 55 60.0
ClCG05G018600 Citrullus lanatus HOM05D000042 ORTHO05D000980 1.9e-08 62.8 53 56.6
Duzib041G0590 Durio zibethinus HOM05D000042 ORTHO05D000980 1.9e-08 62.8 54 53.7
FAN23G0933 Fragaria x ananassa HOM05D000042 ORTHO05D000980 1.9e-08 62.8 55 58.2
Medtr5g021270 Medicago truncatula HOM05D000042 ORTHO05D000980 2.5e-08 62.4 58 58.6
Sc03g0003370 Simmondsia chinensis HOM05D000042 ORTHO05D000980 2.5e-08 62.4 55 56.4
TPR.G2385 Trifolium pratense HOM05D000042 ORTHO05D000980 2.5e-08 62.4 58 58.6
FAN19G0493 Fragaria x ananassa HOM05D000042 ORTHO05D000980 3.3e-08 62.0 55 58.2
Lj1g0020637 Lotus japonicus HOM05D000042 ORTHO05D000980 3.3e-08 62.0 74 47.3
PSO541G4942 Papaver somniferum HOM05D000042 ORTHO05D000980 4.3e-08 61.6 53 52.8
Eucgr.I02376 Eucalyptus grandis HOM05D000042 ORTHO05D000980 5.6e-08 61.2 52 55.8
Aqoxy6G02422 Aquilegia oxysepala HOM05D000042 ORTHO05D000980 7.3e-08 60.8 50 54.0
Psat2g156520 Pisum sativum HOM05D000042 ORTHO05D000980 7.3e-08 60.8 58 58.6
RcHm_v2.0_Chr2g0100071 Rosa chinensis HOM05D000042 ORTHO05D000980 7.3e-08 60.8 55 54.5
Sed0023354 Sechium edule HOM05D000042 ORTHO05D000980 7.3e-08 60.8 56 53.6
PGSC0003DMG400003541 Solanum tuberosum HOM05D000042 ORTHO05D000980 7.3e-08 60.8 55 56.4
Nitab4.5_0004086g0040 Nicotiana tabacum HOM05D000042 ORTHO05D000980 9.6e-08 60.5 55 56.4
Sc02g0005250 Simmondsia chinensis HOM05D000042 ORTHO05D000980 9.6e-08 60.5 55 58.2
Solyc02g084630.3 Solanum lycopersicum HOM05D000042 ORTHO05D000980 9.6e-08 60.5 55 56.4
Sopen02g029300 Solanum pennellii HOM05D000042 ORTHO05D000980 9.6e-08 60.5 55 56.4
QL09p025203 Quercus lobata HOM05D000042 ORTHO05D000980 1.3e-07 60.1 50 56.0
AUR62007658 Chenopodium quinoa HOM05D000042 ORTHO05D000980 1.6e-07 59.7 51 56.9
DCAR_017330 Daucus carota HOM05D000042 ORTHO05D000980 1.6e-07 59.7 38 78.9
Sed0007855 Sechium edule HOM05D000042 ORTHO05D000980 1.6e-07 59.7 70 47.1
FvH4_1g12260 Fragaria vesca HOM05D000042 ORTHO05D000980 2.1e-07 59.3 53 58.5
PGSC0003DMG400003709 Solanum tuberosum HOM05D000042 ORTHO05D000980 2.1e-07 59.3 52 53.8
Thecc.08G036900 Theobroma cacao HOM05D000042 ORTHO05D000980 2.1e-07 59.3 52 53.8
CSS0025728 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000980 2.8e-07 58.9 52 57.7
CiPaw.08G136100 Carya illinoinensis HOM05D000042 ORTHO05D000980 2.8e-07 58.9 56 53.6
Ca_24890_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000980 2.8e-07 58.9 58 56.9
AUR62007643 Chenopodium quinoa HOM05D000042 ORTHO05D000980 3.6e-07 58.5 51 56.9
Gohir.A05G257900 Gossypium hirsutum HOM05D000042 ORTHO05D000980 3.6e-07 58.5 52 51.9
Gohir.D05G259300 Gossypium hirsutum HOM05D000042 ORTHO05D000980 3.6e-07 58.5 52 51.9
Gorai.009G271100 Gossypium raimondii HOM05D000042 ORTHO05D000980 3.6e-07 58.5 52 51.9
Peaxi162Scf01084g00119 Petunia axillaris HOM05D000042 ORTHO05D000980 3.6e-07 58.5 52 53.8
Lj2g0008119 Lotus japonicus HOM05D000042 ORTHO05D000980 4.8e-07 58.2 80 42.5
Lalb_Chr09g0322021 Lupinus albus HOM05D000042 ORTHO05D000980 4.8e-07 58.2 79 44.3
Lalb_Chr05g0212521 Lupinus albus HOM05D000042 ORTHO05D000980 6.2e-07 57.8 79 43.0
Cc10_g02160 Coffea canephora HOM05D000042 ORTHO05D000980 8.1e-07 57.4 52 57.7
Solyc04g081000.3 Solanum lycopersicum HOM05D000042 ORTHO05D000980 8.1e-07 57.4 52 51.9
Sopen04g034610 Solanum pennellii HOM05D000042 ORTHO05D000980 8.1e-07 57.4 52 51.9
Ca_02063_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000980 1.4e-06 56.6 48 56.2
FAN28G2682 Fragaria x ananassa HOM05D000042 ORTHO05D000980 1.4e-06 56.6 55 54.5
MD08G1021300 Malus domestica HOM05D000042 ORTHO05D000980 1.4e-06 56.6 53 52.8
Psat5g013960 Pisum sativum HOM05D000042 ORTHO05D000980 1.4e-06 56.6 48 60.4
Aqoxy1G03883 Aquilegia oxysepala HOM05D000042 ORTHO05D000980 2.4e-06 55.8 52 55.8
Migut.N03130 Erythranthe guttata HOM05D000042 ORTHO05D000980 2.4e-06 55.8 52 51.9
Glyma.01G169600 Glycine max HOM05D000042 ORTHO05D000980 2.4e-06 55.8 80 40.0
arahy.Tifrunner.gnm1.ann1.MX0VEQ Arachis hypogaea HOM05D000042 ORTHO05D000980 3.1e-06 55.5 64 48.4
Haze_03819 Corylus avellana HOM05D000042 ORTHO05D000980 3.1e-06 55.5 52 51.9
Oeu018117.1 Olea europaea HOM05D000042 ORTHO05D000980 3.1e-06 55.5 55 52.7
MSTRG.1230 Avicennia marina HOM05D000042 ORTHO05D000980 4.0e-06 55.1 52 53.8
Glyma.06G027200 Glycine max HOM05D000042 ORTHO05D000980 4.0e-06 55.1 48 54.2
VMungo1215G1814 Vigna mungo HOM05D000042 ORTHO05D000980 4.0e-06 55.1 80 41.2
Nitab4.5_0014584g0010 Nicotiana tabacum HOM05D000042 ORTHO05D000980 5.3e-06 54.7 55 52.7
PSO425G0046 Papaver somniferum HOM05D000042 ORTHO05D000980 5.3e-06 54.7 52 50.0
arahy.Tifrunner.gnm1.ann1.QB26WD Arachis hypogaea HOM05D000042 ORTHO05D000980 6.9e-06 54.3 80 41.2
MSTRG.25216 Avicennia marina HOM05D000042 ORTHO05D000980 6.9e-06 54.3 52 51.9
Cfa013900 Carpinus fangiana HOM05D000042 ORTHO05D000980 6.9e-06 54.3 53 50.9
Ciclev10002410m.g Citrus clementina HOM05D000042 ORTHO05D000980 6.9e-06 54.3 50 58.0
Medtr3g113030 Medicago truncatula HOM05D000042 ORTHO05D000980 6.9e-06 54.3 48 58.3
Phvul.002G112200 Phaseolus vulgaris HOM05D000042 ORTHO05D000980 6.9e-06 54.3 57 52.6
Rhsim06G0027000 Rhododendron simsii HOM05D000042 ORTHO05D000980 6.9e-06 54.3 51 51.0
Glyma.11G073700 Glycine max HOM05D000042 ORTHO05D000980 9.0e-06 53.9 57 49.1
Prupe.1G371300 Prunus persica HOM05D000042 ORTHO05D000980 9.0e-06 53.9 51 52.9
Hund14022 Selenicereus undatus HOM05D000042 ORTHO05D000980 9.0e-06 53.9 55 49.1
TPR.G31198 Trifolium pratense HOM05D000042 ORTHO05D000980 9.0e-06 53.9 51 54.9


User provided reference genes

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