Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 6.8e-203 710.3 326 100.0
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 3.2e-120 435.6 362 63.5
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 4.1e-91 339.0 361 51.2
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-89 333.6 361 51.8
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-80 303.9 342 47.4
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.1e-79 300.1 363 47.9
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 1.8e-78 297.0 299 53.2
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 9.0e-70 268.1 333 49.5
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.8e-62 243.8 219 56.6
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-54 217.6 203 55.2
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-48 197.6 192 53.1
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 3.1e-46 189.9 350 36.3
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 2.9e-44 183.3 340 37.4
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.1e-38 163.3 368 33.2
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.1e-38 162.9 357 31.1
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.5e-37 161.0 356 31.5
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 2.6e-37 160.2 361 32.7
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-35 152.9 218 42.7
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.1e-34 150.6 319 32.9
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.6e-26 123.2 234 32.1
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 6.7e-25 119.0 292 29.8
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.6e-24 117.1 372 28.5
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 2.8e-23 113.6 320 29.1
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.8e-23 113.6 289 29.4
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.1e-22 109.8 331 29.3
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.5e-21 106.3 314 29.0
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 8.5e-20 102.1 281 31.0
Lj5E336G0 Lonicera japonica HOM05D007560 ORTHO05D005947 8.5e-20 102.1 148 40.5
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 1.1e-19 101.7 325 28.6
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.2e-19 99.8 316 28.2
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.6e-18 97.8 281 29.2
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.1e-18 97.4 318 27.4
Solyc04g082080.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 2.1e-18 97.4 326 27.0
Lj4C614T4 Lonicera japonica HOM05D007560 ORTHO05D005947 8.0e-18 95.5 48 79.2
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 8.0e-18 95.5 292 28.1
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-17 94.4 318 26.4
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-17 94.4 318 26.4
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.8e-17 94.4 295 27.5
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.3e-17 94.0 203 29.1
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 8.8e-17 92.0 297 27.6
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 1.2e-16 91.7 337 27.3
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 1.5e-16 91.3 320 26.2
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 4.4e-16 89.7 303 26.4
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 5.7e-16 89.4 316 27.2
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 5.7e-16 89.4 195 30.8
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.7e-15 87.8 319 24.5
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 1.7e-15 87.8 318 26.1
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 1.7e-15 87.8 326 25.5
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.2e-15 87.4 329 25.8
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.8e-15 87.0 200 27.5
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 1.4e-14 84.7 323 25.7
PGSC0003DMG400027349 Solanum tuberosum HOM05D007560 ORTHO05D005947 5.3e-14 82.8 256 26.2
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.6e-13 81.3 162 30.9
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.6e-13 81.3 162 30.9
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.6e-13 81.3 162 30.9
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.5e-13 79.7 204 26.5
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.9e-13 79.3 159 31.4
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.0e-12 78.6 321 25.2
Solyc11g007650.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 2.9e-12 77.0 252 25.0
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 5.0e-12 76.3 202 26.2
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 6.5e-12 75.9 255 29.0
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.5e-12 75.5 279 25.8
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 8.5e-12 75.5 194 25.8
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.9e-11 74.3 206 30.6
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 7.2e-11 72.4 162 31.5
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 7.2e-11 72.4 170 29.4
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 9.4e-11 72.0 190 27.9
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.6e-10 70.1 163 30.7
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.6e-10 70.1 182 28.0
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.0e-10 68.9 289 24.2
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.4e-09 68.2 282 24.5
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.0e-09 67.0 209 25.4
Aqoxy7G01104 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.8e-09 65.5 287 25.1
Aqoxy2G03979 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.2e-08 65.1 193 26.9
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 1.2e-08 65.1 222 27.5
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 1.5e-08 64.7 70 38.6
PSO170G2117 Papaver somniferum HOM05D008691 ORTHO05D005947 1.5e-08 64.7 190 25.8
PSO407G0090 Papaver somniferum HOM05D008691 ORTHO05D005947 1.5e-08 64.7 190 25.8
PSO407G0147 Papaver somniferum HOM05D008691 ORTHO05D005947 1.5e-08 64.7 190 25.3
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 1.5e-08 64.7 198 26.3
Gohir.D07G196000 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.0e-08 64.3 238 26.9
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-08 63.9 197 25.9
Gohir.A07G189800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.6e-08 63.9 238 26.5
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.7e-08 62.8 283 25.4
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 7.5e-08 62.4 249 27.7
Lj4A614G14 Lonicera japonica HOM05D007560 ORTHO05D005947 7.5e-08 62.4 81 48.1
PSO407G0177 Papaver somniferum HOM05D008691 ORTHO05D005947 7.5e-08 62.4 190 24.7
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-07 61.6 131 29.8
Peaxi162Scf00776g00029 Petunia axillaris HOM05D000007 ORTHO05D000521 1.3e-07 61.6 279 24.0
Gorai.001G219500 Gossypium raimondii HOM05D000007 ORTHO05D000521 1.7e-07 61.2 238 26.5
PSO407G0054 Papaver somniferum HOM05D008691 ORTHO05D005947 1.7e-07 61.2 190 24.7
PSO407G0139 Papaver somniferum HOM05D008691 ORTHO05D005947 1.7e-07 61.2 190 24.7
PSO407G0264 Papaver somniferum HOM05D008691 ORTHO05D005947 1.7e-07 61.2 190 24.7
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.7e-07 61.2 316 26.6
PSO339G4378 Papaver somniferum HOM05D008691 ORTHO05D005947 2.2e-07 60.8 244 23.8
PSO407G0400 Papaver somniferum HOM05D008691 ORTHO05D005947 2.2e-07 60.8 190 24.7
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.8e-07 60.5 308 21.8
CAN.G1036.9 Capsicum annuum HOM05D000007 ORTHO05D000521 6.3e-07 59.3 277 24.5
FvH4_1g29150 Fragaria vesca HOM05D000007 ORTHO05D000521 6.3e-07 59.3 236 22.9
Lj8P356T28 Lonicera japonica HOM05D007560 ORTHO05D005947 6.3e-07 59.3 83 45.8
PSO063G7584 Papaver somniferum HOM05D008691 ORTHO05D005947 6.3e-07 59.3 109 28.4
PSO170G2572 Papaver somniferum HOM05D008691 ORTHO05D005947 6.3e-07 59.3 107 29.0
Gohir.D11G157600 Gossypium hirsutum HOM05D000007 ORTHO05D000521 1.4e-06 58.2 290 22.4
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 1.8e-06 57.8 118 33.1
Duzib138G1457 Durio zibethinus HOM05D000007 ORTHO05D000521 2.4e-06 57.4 239 24.7
Migut.H00811 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.4e-06 57.4 225 24.0
SGA_v2.0_scaffold279G46806 Striga asiatica HOM05D031079 ORTHO05D005947 2.4e-06 57.4 235 27.7
Medtr5g010610 Medicago truncatula HOM05D000007 ORTHO05D000521 4.1e-06 56.6 313 23.0
Thecc.01G185500 Theobroma cacao HOM05D000007 ORTHO05D000521 5.4e-06 56.2 206 25.7
CANSAT80G1792 Cannabis sativa HOM05D000007 ORTHO05D000521 7.0e-06 55.8 212 24.5
Lj6C626T9 Lonicera japonica HOM05D007560 ORTHO05D005947 7.0e-06 55.8 78 43.6
CiPaw.13G053300 Carya illinoinensis HOM05D000007 ORTHO05D000521 9.1e-06 55.5 307 23.1
Nitab4.5_0021475g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 9.1e-06 55.5 196 23.5


User provided reference genes

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