Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C326T9 Lonicera japonica HOM05D008582 ORTHO05D010200 9.4e-123 443.7 256 100.0
Lj5C326G5 Lonicera japonica HOM05D008582 ORTHO05D010200 1.3e-87 327.0 230 76.1
Lj5C326G8 Lonicera japonica HOM05D008582 ORTHO05D010200 1.6e-61 240.4 235 58.7
Lj5P327T15 Lonicera japonica HOM05D008582 ORTHO05D010200 6.6e-44 181.8 241 48.5
Lj5P326T20 Lonicera japonica HOM05D008582 ORTHO05D010200 2.3e-36 156.8 175 52.0
Actinidia01501 Actinidia chinensis HOM05D008582 ORTHO05D010200 8.7e-28 128.3 242 38.0
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 2.6e-24 116.7 249 34.1
Rhsim05G0128000 Rhododendron simsii HOM05D008582 ORTHO05D010200 4.2e-22 109.4 237 34.6
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 1.2e-21 107.8 140 44.3
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 1.2e-21 107.8 138 47.1
QL03p015351 Quercus lobata HOM05D008582 ORTHO05D010200 1.0e-20 104.8 251 33.5
QL03p015220 Quercus lobata HOM05D008582 ORTHO05D010200 1.9e-19 100.5 242 32.6
Lj5A326T50 Lonicera japonica HOM05D008582 ORTHO05D010200 3.3e-19 99.8 190 36.8
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 4.8e-18 95.9 138 42.8
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 5.9e-16 89.0 254 30.7
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 7.7e-16 88.6 144 41.0
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 1.0e-15 88.2 141 44.0
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 2.9e-15 86.7 234 29.1
CANSAT54G1821 Cannabis sativa HOM05D008582 ORTHO05D010200 1.4e-14 84.3 239 31.0
FvH4_6g07633 Fragaria vesca HOM05D008582 ORTHO05D010200 4.2e-14 82.8 253 29.2
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 9.4e-14 81.6 132 41.7
QL03p015030 Quercus lobata HOM05D008582 ORTHO05D010200 1.6e-13 80.9 140 37.9
FvH4_6g07631 Fragaria vesca HOM05D008582 ORTHO05D010200 2.1e-13 80.5 245 31.0
FAN14G3048 Fragaria x ananassa HOM05D008582 ORTHO05D010200 3.6e-13 79.7 237 29.1
FAN14G5961 Fragaria x ananassa HOM05D008582 ORTHO05D010200 7.9e-13 78.6 250 30.4
Atru.chr2.336 Acer truncatum HOM05D011415 ORTHO05D010200 2.0e-11 73.9 142 39.4
QL03p015213 Quercus lobata HOM05D008582 ORTHO05D010200 2.0e-11 73.9 138 38.4
AUR62006733 Chenopodium quinoa HOM05D019907 ORTHO05D010200 5.7e-11 72.4 141 39.7
Nitab4.5_0004317g0010 Nicotiana tabacum HOM05D011415 ORTHO05D010200 9.7e-11 71.6 148 31.8
Nitab4.5_0004317g0040 Nicotiana tabacum HOM05D011415 ORTHO05D010200 1.3e-10 71.2 147 32.0
Peaxi162Scf00170g00088 Petunia axillaris HOM05D011415 ORTHO05D010200 1.7e-10 70.9 226 27.0
QL03p015096 Quercus lobata HOM05D008582 ORTHO05D010200 1.7e-10 70.9 139 37.4
AUR62000380 Chenopodium quinoa HOM05D019907 ORTHO05D010200 2.8e-10 70.1 141 39.7
COL.COLO4_12937 Corchorus olitorius HOM05D008582 ORTHO05D010200 2.8e-10 70.1 145 37.2
CAN.G756.12 Capsicum annuum HOM05D011415 ORTHO05D010200 3.7e-10 69.7 253 24.9
FAN14G0417 Fragaria x ananassa HOM05D008582 ORTHO05D010200 6.3e-10 68.9 157 35.0
PGSC0003DMG400019128 Solanum tuberosum HOM05D011415 ORTHO05D010200 1.1e-09 68.2 153 34.0
Actinidia17919 Actinidia chinensis HOM05D000886 ORTHO05D000525 1.8e-09 67.4 143 31.5
EL10Ac4g09476 Beta vulgaris HOM05D029458 ORTHO05D010200 2.4e-09 67.0 131 33.6
PGSC0003DMG400019127 Solanum tuberosum HOM05D011415 ORTHO05D010200 2.4e-09 67.0 153 32.0
EL10Ac4g09475 Beta vulgaris HOM05D029458 ORTHO05D010200 3.1e-09 66.6 131 34.4
Glyma.12G144600 Glycine max HOM05D000886 ORTHO05D000525 3.1e-09 66.6 139 33.8
QL03p015391 Quercus lobata HOM05D008582 ORTHO05D010200 3.1e-09 66.6 115 38.3
Rhsim05G0127800 Rhododendron simsii HOM05D008582 ORTHO05D010200 3.1e-09 66.6 104 39.4
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 4.1e-09 66.2 145 35.2
Peaxi162Scf00429g00052 Petunia axillaris HOM05D011415 ORTHO05D010200 9.1e-09 65.1 148 33.8
Solyc10g076810.1 Solanum lycopersicum HOM05D011415 ORTHO05D010200 9.1e-09 65.1 153 32.7
Os01g0660500 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 1.5e-08 64.3 134 29.9
QL03p015309 Quercus lobata HOM05D008582 ORTHO05D010200 1.5e-08 64.3 105 40.0
Rhsim13G0003000 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.5e-08 64.3 139 30.9
Sopen10g028450 Solanum pennellii HOM05D011415 ORTHO05D010200 2.0e-08 63.9 151 29.8
CDE01G0758 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 2.6e-08 63.5 141 33.3
Atru.chr5.961 Acer truncatum HOM05D000886 ORTHO05D000525 3.4e-08 63.2 138 31.9
PSO541G1163 Papaver somniferum HOM05D000886 ORTHO05D000525 4.5e-08 62.8 142 31.7
FAN05G2556 Fragaria x ananassa HOM05D008582 ORTHO05D010200 5.9e-08 62.4 157 33.1
Dinv24474 Davidia involucrata HOM05D008582 ORTHO05D010200 7.7e-08 62.0 79 41.8
Os01g0660800 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 1.0e-07 61.6 142 31.0
SGA_v2.0_scaffold198G41114 Striga asiatica HOM05D000886 ORTHO05D000525 1.0e-07 61.6 133 38.3
ECA234G2044 Erigeron canadensis HOM05D000886 ORTHO05D000525 1.3e-07 61.2 133 30.8
Migut.N00933 Erythranthe guttata HOM05D000886 ORTHO05D000525 1.3e-07 61.2 140 35.7
Lj1g0026528 Lotus japonicus HOM05D000886 ORTHO05D000525 1.3e-07 61.2 144 34.0
Peaxi162Scf00469g00633 Petunia axillaris HOM05D011415 ORTHO05D010200 1.3e-07 61.2 243 26.7
Solyc01g088540.1 Solanum lycopersicum HOM05D011415 ORTHO05D010200 1.3e-07 61.2 140 32.1
Sopen01g035400 Solanum pennellii HOM05D011415 ORTHO05D010200 1.3e-07 61.2 140 32.1
CSS0004464 Camellia sinensis var. sinensis HOM05D000886 ORTHO05D000525 2.9e-07 60.1 136 33.1
Haze_00024 Corylus avellana HOM05D000886 ORTHO05D000525 2.9e-07 60.1 141 31.9
AUR62018411 Chenopodium quinoa HOM05D000886 ORTHO05D000525 3.8e-07 59.7 135 31.9
Phvul.002G068500 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 5.0e-07 59.3 135 33.3
PGSC0003DMG400039513 Solanum tuberosum HOM05D011415 ORTHO05D010200 5.0e-07 59.3 140 31.4
PSO675G6200 Papaver somniferum HOM05D000886 ORTHO05D000525 8.5e-07 58.5 142 29.6
Zm00001eb359560 Zea mays HOM05D000886 ORTHO05D000525 1.4e-06 57.8 143 32.9
Ah.06g196130 Amaranthus hybridus HOM05D019907 ORTHO05D010200 1.9e-06 57.4 226 26.5
EL10Ac4g09478 Beta vulgaris HOM05D029458 ORTHO05D004309 1.9e-06 57.4 141 35.5
Cc00_g29270 Coffea canephora HOM05D000886 ORTHO05D000525 1.9e-06 57.4 134 29.9
Aqoxy2G02686 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.5e-06 57.0 139 29.5
Aqoxy3G03479 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.5e-06 57.0 131 33.6
Dinv30902 Davidia involucrata HOM05D008582 ORTHO05D010200 2.5e-06 57.0 86 41.9
Thhalv10017696m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 2.5e-06 57.0 137 30.7
PGR083G1422 Punica granatum HOM05D000886 ORTHO05D000525 2.5e-06 57.0 134 30.6
QL03p015279 Quercus lobata HOM05D008582 ORTHO05D010200 2.5e-06 57.0 83 41.0
Aqoxy2G02676 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 3.2e-06 56.6 142 27.5
Cfa016272 Carpinus fangiana HOM05D000886 ORTHO05D000525 4.2e-06 56.2 138 31.2
Lj5P282T58 Lonicera japonica HOM05D000886 ORTHO05D000525 4.2e-06 56.2 138 31.2
CiPaw.01G083200 Carya illinoinensis HOM05D000886 ORTHO05D000525 7.2e-06 55.5 138 29.7
TWI18G0454 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 7.2e-06 55.5 134 29.9
TAR365G0209 Trochodendron aralioides HOM05D000886 ORTHO05D000525 7.2e-06 55.5 134 31.3
HPP92_008929 Vanilla planifolia HOM05D000886 ORTHO05D000525 7.2e-06 55.5 140 31.4
AUR62021032 Chenopodium quinoa HOM05D000886 ORTHO05D000525 9.4e-06 55.1 135 31.1
Gohir.A12G121800 Gossypium hirsutum HOM05D007899 ORTHO05D010282 9.4e-06 55.1 141 24.1
Thecc.01G317300 Theobroma cacao HOM05D000886 ORTHO05D000525 9.4e-06 55.1 134 30.6


User provided reference genes

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