Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C326G8 Lonicera japonica HOM05D008582 ORTHO05D010200 1.6e-106 389.4 196 100.0
Lj5C326G5 Lonicera japonica HOM05D008582 ORTHO05D010200 5.4e-62 241.5 217 63.1
Lj5C326T9 Lonicera japonica HOM05D008582 ORTHO05D010200 1.7e-60 236.5 235 58.7
Lj5P326T20 Lonicera japonica HOM05D008582 ORTHO05D010200 2.6e-56 222.6 141 82.3
Lj5P327T15 Lonicera japonica HOM05D008582 ORTHO05D010200 1.1e-46 190.7 208 57.2
Lj5A326T50 Lonicera japonica HOM05D008582 ORTHO05D010200 4.6e-37 158.7 160 60.0
Actinidia01501 Actinidia chinensis HOM05D008582 ORTHO05D010200 1.5e-32 143.7 202 45.5
Rhsim05G0128000 Rhododendron simsii HOM05D008582 ORTHO05D010200 2.8e-26 122.9 206 39.8
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 9.0e-25 117.9 196 38.8
QL03p015351 Quercus lobata HOM05D008582 ORTHO05D010200 2.9e-23 112.8 224 36.2
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 1.1e-22 110.9 224 36.6
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 2.7e-21 106.3 202 36.6
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 7.9e-21 104.8 204 37.7
CANSAT54G1821 Cannabis sativa HOM05D008582 ORTHO05D010200 1.0e-20 104.4 208 38.0
FvH4_6g07633 Fragaria vesca HOM05D008582 ORTHO05D010200 1.5e-19 100.5 216 37.5
QL03p015220 Quercus lobata HOM05D008582 ORTHO05D010200 2.5e-19 99.8 214 36.0
FvH4_6g07631 Fragaria vesca HOM05D008582 ORTHO05D010200 9.7e-19 97.8 209 38.8
FAN14G5961 Fragaria x ananassa HOM05D008582 ORTHO05D010200 2.8e-18 96.3 209 38.8
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 8.2e-18 94.7 196 34.7
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 1.4e-17 94.0 201 37.8
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 2.4e-17 93.2 249 30.9
FAN14G3048 Fragaria x ananassa HOM05D008582 ORTHO05D010200 4.1e-17 92.4 200 36.0
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 2.0e-16 90.1 198 31.3
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 2.6e-16 89.7 189 36.0
FAN14G0417 Fragaria x ananassa HOM05D008582 ORTHO05D010200 1.7e-15 87.0 204 36.3
QL03p015030 Quercus lobata HOM05D008582 ORTHO05D010200 5.0e-15 85.5 187 32.1
FAN05G2556 Fragaria x ananassa HOM05D008582 ORTHO05D010200 1.9e-14 83.6 211 35.1
Dinv24474 Davidia involucrata HOM05D008582 ORTHO05D010200 7.2e-14 81.6 197 32.0
EL10Ac4g09475 Beta vulgaris HOM05D029458 ORTHO05D010200 2.1e-13 80.1 213 32.4
EL10Ac4g09476 Beta vulgaris HOM05D029458 ORTHO05D010200 1.0e-12 77.8 215 30.7
QL03p015391 Quercus lobata HOM05D008582 ORTHO05D010200 5.1e-12 75.5 126 38.1
CAN.G756.12 Capsicum annuum HOM05D011415 ORTHO05D010200 1.3e-10 70.9 205 30.2
Rhsim05G0127800 Rhododendron simsii HOM05D008582 ORTHO05D010200 1.7e-10 70.5 101 40.6
Atru.chr2.336 Acer truncatum HOM05D011415 ORTHO05D010200 2.2e-10 70.1 140 38.6
QL03p015213 Quercus lobata HOM05D008582 ORTHO05D010200 2.2e-10 70.1 171 33.3
AUR62006735 Chenopodium quinoa HOM05D019907 ORTHO05D010200 6.3e-10 68.6 204 31.9
QL03p015096 Quercus lobata HOM05D008582 ORTHO05D010200 6.3e-10 68.6 171 32.7
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 1.4e-09 67.4 157 35.7
Actinidia17919 Actinidia chinensis HOM05D000886 ORTHO05D000525 2.4e-09 66.6 142 33.1
PSO541G1163 Papaver somniferum HOM05D000886 ORTHO05D000525 2.4e-09 66.6 192 29.7
Nitab4.5_0004317g0010 Nicotiana tabacum HOM05D011415 ORTHO05D010200 4.1e-09 65.9 145 33.1
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 5.3e-09 65.5 175 32.6
CDE02G3341 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 6.9e-09 65.1 164 29.9
Haze_00024 Corylus avellana HOM05D000886 ORTHO05D000525 9.1e-09 64.7 198 29.3
PSO675G6200 Papaver somniferum HOM05D000886 ORTHO05D000525 1.2e-08 64.3 192 28.6
Thhalv10017696m.g Eutrema salsugineum HOM05D000886 ORTHO05D000525 1.5e-08 63.9 195 28.2
Lj1g0026528 Lotus japonicus HOM05D000886 ORTHO05D000525 1.5e-08 63.9 143 32.9
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 1.5e-08 63.9 133 36.1
Zm00001eb359560 Zea mays HOM05D000886 ORTHO05D000525 3.4e-08 62.8 143 33.6
Nitab4.5_0004317g0040 Nicotiana tabacum HOM05D011415 ORTHO05D010200 4.5e-08 62.4 144 34.0
AUR62018411 Chenopodium quinoa HOM05D000886 ORTHO05D000525 7.7e-08 61.6 167 31.1
QL03p015279 Quercus lobata HOM05D008582 ORTHO05D010200 1.3e-07 60.8 151 31.8
ATR0693G315 Amborella trichopoda HOM05D000886 ORTHO05D000525 1.7e-07 60.5 142 27.5
Zm00001eb157800 Zea mays HOM05D000886 ORTHO05D000525 1.7e-07 60.5 134 32.1
QL03p015309 Quercus lobata HOM05D008582 ORTHO05D010200 2.2e-07 60.1 151 32.5
CAN.G220.19 Capsicum annuum HOM05D000886 ORTHO05D000525 2.9e-07 59.7 197 28.4
Dinv30902 Davidia involucrata HOM05D008582 ORTHO05D010200 2.9e-07 59.7 85 41.2
GSVIVG01025807001 Vitis vinifera HOM05D000886 ORTHO05D000525 3.8e-07 59.3 136 31.6
Phvul.007G212800 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 5.0e-07 58.9 136 29.4
COL.COLO4_12936 Corchorus olitorius HOM05D008582 ORTHO05D010200 6.5e-07 58.5 136 30.9
CAN.G220.15 Capsicum annuum HOM05D000886 ORTHO05D000525 8.5e-07 58.2 200 28.5
AUR62021032 Chenopodium quinoa HOM05D000886 ORTHO05D000525 8.5e-07 58.2 187 29.4
Glyma.12G144600 Glycine max HOM05D000886 ORTHO05D000525 1.4e-06 57.4 203 25.6
SGA_v2.0_scaffold240G44131 Striga asiatica HOM05D000886 ORTHO05D000525 1.4e-06 57.4 156 34.0
CAN.G723.34 Capsicum annuum HOM05D000886 ORTHO05D000525 1.9e-06 57.0 199 27.6
CDE01G0758 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 1.9e-06 57.0 151 30.5
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 1.9e-06 57.0 155 29.7
Actinidia35513 Actinidia chinensis HOM05D000886 ORTHO05D000525 2.5e-06 56.6 198 28.3
SalBow3G0713 Salvia bowleyana HOM05D000886 ORTHO05D000525 3.2e-06 56.2 210 28.6
CAN.G220.20 Capsicum annuum HOM05D000886 ORTHO05D000525 4.2e-06 55.8 197 27.4
Hma1.2p1_0662F.1_g198230 Hydrangea macrophylla HOM05D000886 ORTHO05D000525 4.2e-06 55.8 155 31.0
Rhsim13G0003000 Rhododendron simsii HOM05D000886 ORTHO05D000525 4.2e-06 55.8 138 29.0
Solyc01g103460.2 Solanum lycopersicum HOM05D000886 ORTHO05D000525 4.2e-06 55.8 143 31.5
CAN.G809.12 Capsicum annuum HOM05D000886 ORTHO05D000525 5.5e-06 55.5 195 29.2
Cc00_g29270 Coffea canephora HOM05D000886 ORTHO05D000525 5.5e-06 55.5 198 24.7
Lj5P282T58 Lonicera japonica HOM05D000886 ORTHO05D000525 5.5e-06 55.5 208 25.0
Sopen01g044180 Solanum pennellii HOM05D000886 ORTHO05D000525 5.5e-06 55.5 195 28.2
TAR623G1595 Trochodendron aralioides HOM05D000886 ORTHO05D000525 5.5e-06 55.5 133 29.3
HPP92_008929 Vanilla planifolia HOM05D000886 ORTHO05D000525 5.5e-06 55.5 139 32.4
Sopen08g003290 Solanum pennellii HOM05D000886 ORTHO05D000525 7.2e-06 55.1 198 28.3
CiPaw.01G083200 Carya illinoinensis HOM05D000886 ORTHO05D000525 9.4e-06 54.7 182 28.0
Peaxi162Scf00102g00087 Petunia axillaris HOM05D000886 ORTHO05D000525 9.4e-06 54.7 142 31.0
Sopen01g045820 Solanum pennellii HOM05D000886 ORTHO05D000525 9.4e-06 54.7 201 27.9
VMungo0647G0937 Vigna mungo HOM05D000886 ORTHO05D000525 9.4e-06 54.7 139 29.5


User provided reference genes

Program Settings