Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C295T1 Lonicera japonica HOM05D014440 ORTHO05D000167 2.0e-70 268.9 123 100.0
Lj5P296T4 Lonicera japonica HOM05D000003 ORTHO05D000004 3.3e-57 224.9 104 99.0
Lj5P109T70 Lonicera japonica HOM05D014440 ORTHO05D000167 4.6e-51 204.5 104 87.5
Lj3P924T30 Lonicera japonica HOM05D021412 ORTHO05D000167 2.0e-38 162.5 92 79.3
Lj3C1061G3 Lonicera japonica HOM05D000434 ORTHO05D001445 3.6e-19 98.6 99 44.4
Lj1C222T2 Lonicera japonica HOM05D000003 ORTHO05D000004 1.3e-16 90.1 104 37.5
Lj7P99T38 Lonicera japonica HOM05D014440 ORTHO05D000167 1.3e-16 90.1 100 40.0
Lj8C26T8 Lonicera japonica HOM05D000003 ORTHO05D000004 3.7e-16 88.6 89 42.7
Lj2P99T51 Lonicera japonica HOM05D014440 ORTHO05D000167 2.4e-15 85.9 100 41.0
Lj7C747G6 Lonicera japonica HOM05D000003 ORTHO05D000004 4.1e-15 85.1 98 34.7
Lj2C969T7 Lonicera japonica HOM05D000003 ORTHO05D000004 5.3e-15 84.7 99 37.4
Lj2P1018T21 Lonicera japonica HOM05D000003 ORTHO05D000167 5.3e-15 84.7 94 43.6
Lj6P349T18 Lonicera japonica HOM05D000003 ORTHO05D000004 6.9e-15 84.3 100 38.0
Lj2P447T23 Lonicera japonica HOM05D014440 ORTHO05D000167 2.0e-14 82.8 103 36.9
Lj3P442T6 Lonicera japonica HOM05D000003 ORTHO05D000004 4.5e-14 81.6 90 36.7
Lj8P177T18 Lonicera japonica HOM05D014440 ORTHO05D000167 1.0e-13 80.5 102 34.3
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 1.0e-13 80.5 97 38.1
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 1.7e-13 79.7 101 36.6
Lj8P222T10 Lonicera japonica HOM05D014440 ORTHO05D000167 5.0e-13 78.2 103 34.0
Lj5C785T7 Lonicera japonica HOM05D008418 ORTHO05D000004 1.1e-12 77.0 105 35.2
Lj6A354G19 Lonicera japonica HOM05D018958 ORTHO05D000167 4.2e-12 75.1 87 37.9
Lj2P248T48 Lonicera japonica HOM05D000003 ORTHO05D020832 7.2e-12 74.3 97 35.1
Manes.05G188350 Manihot esculenta HOM05D000003 ORTHO05D000004 9.4e-12 73.9 97 35.1
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 1.2e-11 73.6 101 33.7
Lj2P267T18 Lonicera japonica HOM05D000003 ORTHO05D000167 2.7e-11 72.4 90 32.2
Lj7C484T13 Lonicera japonica HOM05D000003 ORTHO05D000167 2.7e-11 72.4 100 31.0
Lj4P801T19 Lonicera japonica HOM05D000003 ORTHO05D000004 3.6e-11 72.0 99 31.3
Lj2P945T11 Lonicera japonica HOM05D021412 ORTHO05D000167 4.7e-11 71.6 88 31.8
CANSAT64G2253 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-11 71.2 97 34.0
Lju3824P0T16 Lonicera japonica HOM05D014440 ORTHO05D000004 6.1e-11 71.2 84 39.3
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 6.1e-11 71.2 102 33.3
CANSAT25G1903 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-10 69.3 97 30.9
CANSAT54G0904 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-10 69.3 97 33.0
Lj7C520T4 Lonicera japonica HOM05D000003 ORTHO05D000004 3.9e-10 68.6 100 28.0
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-10 67.8 97 32.0
CANSAT78G1090 Cannabis sativa HOM05D000003 ORTHO05D000167 6.7e-10 67.8 104 31.7
CANSAT56G2172 Cannabis sativa HOM05D000003 ORTHO05D000167 8.8e-10 67.4 101 33.7
Lj9P485T48 Lonicera japonica HOM05D018958 ORTHO05D000167 1.1e-09 67.0 74 37.8
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-09 66.6 98 29.6
Manes.15G179404 Manihot esculenta HOM05D000003 ORTHO05D000167 1.5e-09 66.6 91 34.1
Lj1g0015020 Lotus japonicus HOM05D000003 ORTHO05D001406 2.6e-09 65.9 88 29.5
CANSAT01G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-09 65.1 105 30.5
CANSAT54G2007 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-09 64.7 100 34.0
FvH4_2g09701 Fragaria vesca HOM05D000003 ORTHO05D000167 9.7e-09 63.9 84 34.5
Lj3A64T8 Lonicera japonica HOM05D014440 ORTHO05D025757 1.7e-08 63.2 100 30.0
CANSAT35G1919 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-08 62.4 97 28.9
CANSAT64G0262 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-08 62.4 101 32.7
Lj1C134T2 Lonicera japonica HOM05D000003 ORTHO05D000167 3.7e-08 62.0 75 36.0
Nitab4.5_0006377g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000167 3.7e-08 62.0 88 34.1
CANSAT21G2373 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-08 61.2 90 28.9
CANSAT78G0730 Cannabis sativa HOM05D000003 ORTHO05D000004 6.3e-08 61.2 90 33.3
Lj7C739T7 Lonicera japonica HOM05D000040 ORTHO05D001305 1.1e-07 60.5 49 42.9
CANSAT25G2489 Cannabis sativa HOM05D000003 ORTHO05D000167 1.4e-07 60.1 97 30.9
CANSAT80G1560 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-07 59.7 117 27.4
CANSAT35G0312 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-07 59.3 97 29.9
CANSAT56G0879 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-07 59.3 97 28.9
Lj2P545T25 Lonicera japonica HOM05D057521 ORTHO05D025757 4.1e-07 58.5 62 37.1
PSO017G3512 Papaver somniferum HOM05D000003 ORTHO05D000004 7.0e-07 57.8 103 29.1
CANSAT21G1260 Cannabis sativa HOM05D000003 ORTHO05D000167 9.1e-07 57.4 97 29.9
AUR62012378 Chenopodium quinoa HOM05D000003 ORTHO05D000004 9.1e-07 57.4 99 32.3
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 9.1e-07 57.4 84 33.3
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-06 57.0 97 24.7
CANSAT25G3211 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-06 57.0 97 29.9
CANSAT64G1882 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-06 57.0 97 32.0
MD06G1107000 Malus domestica HOM05D000003 ORTHO05D000004 1.2e-06 57.0 95 34.7
CANSAT54G1106 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 56.6 91 30.8
CANSAT54G3006 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-06 56.6 94 28.7
CANSAT56G3244 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-06 56.6 97 30.9
CANSAT78G2353 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 56.6 98 30.6
Lj1P1179T15 Lonicera japonica HOM05D000003 ORTHO05D000004 2.0e-06 56.2 60 40.0
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 2.0e-06 56.2 48 43.8
QL11p053175 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-06 56.2 99 34.3
CANSAT11G0573 Cannabis sativa HOM05D000003 ORTHO05D000167 2.6e-06 55.8 111 27.9
Lj4C747T2 Lonicera japonica HOM05D000003 ORTHO05D000004 2.6e-06 55.8 76 35.5
Lju926C12G8 Lonicera japonica HOM05D000003 ORTHO05D000004 2.6e-06 55.8 78 34.6
CANSAT56G2204 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-06 55.5 103 29.1
RcHm_v2.0_Chr7g0243341 Rosa chinensis HOM05D000003 ORTHO05D006737 3.4e-06 55.5 92 32.6
CANSAT54G1259 Cannabis sativa HOM05D000003 ORTHO05D000004 4.5e-06 55.1 83 30.1
Lj4C411T5 Lonicera japonica HOM05D000003 ORTHO05D000167 4.5e-06 55.1 101 26.7
Lj8C225G9 Lonicera japonica HOM05D000003 ORTHO05D000004 4.5e-06 55.1 82 34.1
CANSAT01G2456 Cannabis sativa HOM05D000003 ORTHO05D000167 5.9e-06 54.7 97 27.8
CANSAT01G2533 Cannabis sativa HOM05D000003 ORTHO05D000167 5.9e-06 54.7 97 27.8
CANSAT11G1768 Cannabis sativa HOM05D000003 ORTHO05D000167 5.9e-06 54.7 88 31.8
CANSAT54G3015 Cannabis sativa HOM05D000003 ORTHO05D000167 5.9e-06 54.7 97 25.8
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 5.9e-06 54.7 89 28.1
CANSAT35G1274 Cannabis sativa HOM05D000003 ORTHO05D000004 7.7e-06 54.3 87 27.6
Manes.03G022751 Manihot esculenta HOM05D000003 ORTHO05D000004 7.7e-06 54.3 103 29.1
PSO210G5156 Papaver somniferum HOM05D007979 ORTHO05D008897 7.7e-06 54.3 94 26.6
PSO478G5116 Papaver somniferum HOM05D007979 ORTHO05D008897 7.7e-06 54.3 116 31.0
PSO500G0047 Papaver somniferum HOM05D000003 ORTHO05D000004 7.7e-06 54.3 102 29.4


User provided reference genes

Program Settings