Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 0.0e+00 1115.1 546 100.0
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 2.6e-199 699.1 501 68.9
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 3.1e-192 675.6 496 66.3
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 5.0e-190 668.3 502 65.9
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 9.1e-184 647.5 494 63.6
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 3.5e-183 645.6 494 63.8
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 3.8e-182 642.1 494 63.8
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 9.4e-181 637.5 516 63.2
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 9.4e-181 637.5 494 63.0
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 4.7e-180 635.2 495 62.6
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 2.3e-179 632.9 495 62.6
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 1.2e-178 630.6 495 62.2
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 2.8e-177 625.9 519 59.5
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 1.8e-176 623.2 503 59.6
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 3.1e-176 622.5 493 62.1
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 4.1e-176 622.1 494 61.9
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 2.7e-175 619.4 488 63.7
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 6.5e-174 614.8 459 67.3
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 2.5e-173 612.8 495 60.6
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 1.2e-172 610.5 496 60.3
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 4.7e-172 608.6 495 60.4
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 8.0e-172 607.8 488 62.9
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 1.4e-171 607.1 512 61.3
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 3.0e-171 605.9 495 59.8
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 2.0e-170 603.2 500 59.6
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 2.2e-169 599.7 495 59.8
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 3.7e-169 599.0 496 60.5
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 4.9e-169 598.6 486 61.3
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 8.3e-169 597.8 492 60.8
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 1.1e-165 587.4 496 59.5
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 1.9e-165 586.6 496 58.5
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 2.5e-165 586.3 504 59.1
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 3.3e-165 585.9 492 59.1
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 3.3e-165 585.9 486 60.3
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 4.3e-165 585.5 492 59.3
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 9.5e-165 584.3 495 59.4
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 2.8e-164 582.8 497 59.2
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 3.0e-163 579.3 495 58.2
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 3.0e-163 579.3 492 58.5
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 2.6e-162 576.2 497 57.1
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.4e-162 575.9 533 58.3
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 4.4e-162 575.5 490 61.0
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 4.4e-162 575.5 718 45.8
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 5.7e-162 575.1 485 60.4
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 1.7e-161 573.5 488 57.6
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 2.2e-161 573.2 489 57.9
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 3.7e-161 572.4 494 59.5
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 1.1e-160 570.9 490 58.0
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 3.2e-160 569.3 491 56.6
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 1.2e-159 567.4 541 56.4
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 2.7e-159 566.2 499 55.9
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 4.6e-159 565.5 501 55.9
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 4.6e-159 565.5 494 56.1
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 2.3e-158 563.1 494 56.5
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 3.9e-158 562.4 488 57.2
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 5.0e-158 562.0 492 56.9
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 6.6e-158 561.6 496 57.1
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 8.6e-158 561.2 501 54.9
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 1.1e-157 560.8 482 58.3
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.2e-156 557.4 476 57.4
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 3.6e-156 555.8 488 56.8
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 6.2e-156 555.1 504 54.4
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 1.8e-155 553.5 493 55.8
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 3.4e-154 549.3 488 55.5
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 5.8e-154 548.5 494 54.9
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 9.8e-154 547.7 498 56.0
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 2.9e-153 546.2 490 55.1
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.7e-153 545.8 483 57.6
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 4.9e-153 545.4 494 54.7
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 6.4e-153 545.0 499 55.1
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 1.1e-152 544.3 490 54.9
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 1.1e-152 544.3 483 57.8
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 7.0e-152 541.6 536 52.6
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 5.0e-150 535.4 490 55.3
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 3.6e-148 529.3 484 54.3
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 3.6e-148 529.3 484 54.3
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 1.3e-145 520.8 487 55.6
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.2e-143 514.2 484 55.8
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 2.7e-143 513.1 489 53.0
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 4.6e-143 512.3 494 55.1
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 2.3e-142 510.0 491 53.8
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 1.9e-141 506.9 320 75.9
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 7.6e-138 495.0 442 56.6
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 1.3e-137 494.2 495 52.3
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.9e-137 493.0 483 54.5
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 9.2e-136 488.0 513 51.3
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 1.5e-133 480.7 471 52.7
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 3.5e-127 459.5 474 52.5
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 5.4e-120 435.6 405 53.1
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 3.9e-110 402.9 492 43.3
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 1.6e-108 397.5 473 46.1
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 3.4e-106 389.8 356 55.6
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 1.0e-102 378.3 487 41.9
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 3.9e-102 376.3 489 41.3
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 1.4e-96 357.8 271 66.8
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 4.1e-91 339.7 211 72.0
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 1.6e-87 327.8 285 58.9
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 1.8e-86 324.3 248 60.9
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 1.4e-83 314.7 283 59.7
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 2.6e-82 310.5 216 69.0
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 2.2e-76 290.8 495 36.2
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 1.1e-75 288.5 504 36.9
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.5e-72 277.3 312 49.4
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.2e-68 264.2 261 55.6
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 2.6e-61 240.7 444 38.1
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 5.7e-61 239.6 276 47.5
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 3.7e-60 236.9 158 67.7
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 2.3e-57 227.6 196 62.8
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 2.3e-57 227.6 267 48.3
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.1e-43 182.2 130 63.1
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 2.5e-40 171.0 390 31.8
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 5.8e-37 159.8 295 35.6
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 2.4e-22 111.3 424 27.4
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.1e-22 110.9 115 52.2
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 4.4e-21 107.1 139 44.6
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 9.9e-21 105.9 75 69.3
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.5e-18 97.4 77 62.3
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 9.9e-13 79.3 83 50.6
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 6.4e-12 76.6 364 23.6
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 3.2e-11 74.3 85 48.2
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 5.4e-11 73.6 340 22.9
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 1.6e-10 72.0 74 54.1
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 1.6e-10 72.0 74 54.1
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 1.6e-10 72.0 74 54.1
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 4.6e-10 70.5 339 21.5
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 1.3e-09 68.9 322 23.3
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 1.5e-08 65.5 326 23.3
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 2.5e-08 64.7 368 21.2
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 1.6e-07 62.0 343 21.9
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 2.8e-07 61.2 329 21.3
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 4.8e-07 60.5 400 23.5
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 6.2e-07 60.1 378 22.5
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 2.4e-06 58.2 338 23.4
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 2.4e-06 58.2 403 23.6


User provided reference genes

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