Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 1.2e-216 756.1 359 100.0
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 2.5e-174 615.5 333 85.9
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.5e-174 615.5 368 81.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.3e-173 613.2 361 80.6
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.4e-172 609.8 353 81.0
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 5.3e-172 607.8 357 80.4
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.5e-171 606.3 371 78.2
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 2.0e-171 605.9 359 80.2
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 4.5e-171 604.7 357 80.4
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 9.9e-171 603.6 354 81.1
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.7e-170 602.8 365 78.9
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 2.2e-170 602.4 357 80.7
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 4.9e-170 601.3 364 79.7
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 4.9e-170 601.3 366 79.0
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 4.2e-169 598.2 356 78.9
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 5.4e-169 597.8 357 78.4
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 7.1e-169 597.4 366 78.4
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 9.3e-169 597.0 355 80.0
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 9.3e-169 597.0 357 79.3
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.2e-168 596.7 356 80.9
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.6e-168 596.3 367 78.2
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 4.6e-168 594.7 365 77.3
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 4.6e-168 594.7 366 78.1
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 7.9e-168 594.0 361 78.4
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 7.9e-168 594.0 354 79.7
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 1.0e-167 593.6 366 77.9
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 1.8e-167 592.8 346 81.2
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 3.0e-167 592.0 359 79.1
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 3.0e-167 592.0 360 78.3
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 3.9e-167 591.7 355 76.6
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 3.9e-167 591.7 358 78.2
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 5.1e-167 591.3 357 78.2
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 4.3e-166 588.2 361 77.6
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 5.6e-166 587.8 359 77.2
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 5.6e-166 587.8 361 77.6
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 7.4e-166 587.4 357 77.0
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 1.3e-165 586.6 356 77.5
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.6e-165 586.3 333 82.9
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 8.1e-165 583.9 359 78.6
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.1e-164 583.6 360 77.8
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 1.8e-164 582.8 343 81.3
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 4.0e-164 581.6 364 75.8
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.9e-164 580.9 354 78.5
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 1.2e-163 580.1 352 78.7
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.2e-163 580.1 363 76.0
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 1.5e-163 579.7 362 76.8
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 2.6e-163 578.9 356 78.4
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 5.8e-163 577.8 333 81.1
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.3e-162 576.6 354 78.0
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.2e-162 575.9 354 78.0
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 3.8e-162 575.1 356 77.0
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 6.4e-162 574.3 373 74.3
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.1e-161 573.5 356 76.7
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.2e-161 572.0 331 81.0
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 2.1e-160 569.3 331 81.0
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 2.7e-160 568.9 326 81.0
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.0e-159 567.0 336 80.1
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 2.3e-159 565.8 321 82.9
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 3.9e-159 565.1 355 76.6
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 5.1e-159 564.7 358 77.1
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 5.1e-159 564.7 320 80.6
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 8.7e-159 563.9 324 81.2
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.5e-158 563.1 331 79.2
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.9e-158 562.8 368 73.9
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 2.5e-158 562.4 340 78.5
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.3e-158 561.6 377 73.2
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.6e-157 559.7 326 79.8
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 4.8e-157 558.1 319 79.9
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 6.2e-157 557.8 319 80.6
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 8.2e-157 557.4 319 79.3
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 1.1e-156 557.0 336 77.4
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.4e-156 555.8 359 73.3
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 2.0e-155 552.7 319 79.3
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 3.4e-155 552.0 319 79.3
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.0e-154 550.4 333 77.5
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.0e-154 550.4 319 79.3
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 1.0e-154 550.4 319 79.3
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.3e-154 550.1 331 76.7
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.4e-153 546.6 320 79.4
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.1e-152 542.7 340 75.6
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 8.7e-151 537.3 348 72.7
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 2.5e-150 535.8 348 73.6
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 4.3e-150 535.0 378 69.0
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 4.8e-149 531.6 326 74.8
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.5e-147 526.6 365 69.9
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 2.6e-147 525.8 394 68.0
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.1e-144 516.2 301 79.1
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 5.7e-142 508.1 333 72.4
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 1.7e-141 506.5 297 78.1
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.4e-135 486.9 314 71.3
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.7e-134 480.7 329 71.1
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 5.3e-132 474.9 605 46.9
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 2.0e-131 473.0 338 64.5
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 4.5e-131 471.9 315 69.5
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 7.7e-131 471.1 288 74.7
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 3.8e-130 468.8 322 66.1
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.6e-115 420.2 319 61.8
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 4.4e-110 402.1 262 74.0
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 4.1e-108 395.6 252 73.8
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.3e-98 364.0 229 75.1
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 4.1e-92 342.4 216 77.8
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.1e-89 334.3 282 61.0
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.5e-81 307.4 351 43.6
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 3.7e-77 292.7 165 83.0
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 8.6e-74 281.6 355 40.3
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.4e-71 273.5 317 42.6
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 6.8e-71 271.9 318 42.8
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.1e-64 250.4 184 67.4
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 1.8e-55 220.7 192 55.2
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.2e-44 183.3 126 69.0
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.2e-43 181.4 335 35.5
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 1.0e-37 161.8 200 41.5
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.6e-35 154.5 138 61.6
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 6.7e-34 149.1 208 44.7
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 3.7e-32 143.3 86 74.4
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 2.0e-22 110.9 57 87.7
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.4e-17 93.2 79 54.4
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 2.7e-11 73.9 38 76.3
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.5e-09 68.2 34 79.4
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 1.6e-06 58.2 49 46.9
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 7.7e-06 55.8 35 80.0


User provided reference genes

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