Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 0.0e+00 1179.5 642 100.0
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 3.3e-233 812.0 650 69.4
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.1e-212 743.8 649 63.8
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.2e-211 740.3 649 63.6
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 1.8e-210 736.5 651 62.4
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 5.8e-206 721.5 650 62.5
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 8.4e-205 717.6 648 62.3
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 5.5e-204 714.9 650 62.8
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 6.3e-200 701.4 628 64.2
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 9.0e-199 697.6 666 61.0
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 1.2e-198 697.2 661 59.8
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 5.5e-196 688.3 649 59.9
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 6.1e-195 684.9 652 60.6
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 8.7e-194 681.0 652 60.3
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 6.3e-192 674.9 651 58.4
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 6.9e-191 671.4 651 59.8
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 7.7e-190 667.9 655 60.5
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 7.9e-187 657.9 649 58.2
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.0e-186 657.5 676 58.1
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 6.7e-186 654.8 644 56.8
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 1.1e-185 654.1 650 56.6
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 6.3e-184 648.3 656 56.1
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 6.9e-183 644.8 650 57.7
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 6.5e-181 638.3 683 54.9
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 4.2e-180 635.6 593 61.6
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 6.1e-179 631.7 651 56.2
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 6.1e-179 631.7 648 55.1
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 6.1e-179 631.7 649 57.0
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.4e-178 630.6 638 56.7
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 6.7e-178 628.2 643 55.7
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.5e-177 627.1 644 56.5
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 2.6e-177 626.3 647 55.3
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 5.7e-177 625.2 653 56.4
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 5.7e-177 625.2 647 55.3
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 4.8e-176 622.1 653 56.0
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 1.1e-175 620.9 644 56.4
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 4.1e-175 619.0 654 54.7
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 7.0e-175 618.2 644 55.0
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 4.5e-174 615.5 639 55.7
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 7.7e-174 614.8 653 56.4
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 8.5e-173 611.3 630 56.3
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.2e-171 607.4 666 53.9
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 8.0e-171 604.7 710 51.5
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.0e-170 604.4 634 56.0
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 4.4e-169 599.0 622 55.8
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 7.5e-169 598.2 676 53.0
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.8e-168 596.3 674 53.3
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 3.7e-168 595.9 647 54.3
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 4.8e-168 595.5 641 54.4
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 6.3e-168 595.1 674 53.1
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 6.3e-168 595.1 647 53.9
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 8.2e-168 594.7 615 56.3
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.0e-165 587.8 649 52.7
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 1.3e-165 587.4 647 53.6
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 2.9e-165 586.3 647 52.1
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 8.5e-165 584.7 528 61.0
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.1e-164 584.3 655 52.2
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.5e-161 573.9 612 55.4
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.1e-159 567.8 642 53.0
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.2e-158 564.3 644 52.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 4.5e-158 562.4 597 56.6
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 4.5e-158 562.4 637 52.9
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.9e-158 562.0 792 46.1
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.6e-155 553.9 644 52.2
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.0e-154 551.2 649 51.8
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 2.3e-154 550.1 757 46.4
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 4.9e-152 542.3 639 51.0
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.1e-151 539.3 421 70.1
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 4.5e-150 535.8 640 51.1
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 2.9e-149 533.1 636 50.9
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 1.6e-147 527.3 638 49.5
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.8e-146 523.9 672 48.4
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 3.0e-146 523.1 667 48.3
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 4.0e-146 522.7 644 50.5
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 1.2e-145 521.2 603 52.6
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 1.3e-144 517.7 667 48.1
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 4.9e-144 515.8 691 46.9
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 2.4e-143 513.5 539 53.6
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 9.2e-143 511.5 667 47.7
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 4.3e-140 502.7 691 46.2
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 2.8e-139 500.0 638 49.5
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 1.3e-136 491.1 646 45.7
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 1.1e-132 478.0 452 59.3
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 1.5e-132 477.6 642 45.3
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 1.7e-128 464.2 452 58.8
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 1.3e-125 454.5 473 55.0
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.2e-123 448.0 663 43.3
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 4.9e-120 436.0 514 51.0
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 3.1e-114 416.8 708 40.5
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.5e-113 414.5 655 44.9
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 2.0e-113 414.1 490 51.6
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.7e-112 411.0 641 43.2
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 4.9e-112 409.5 649 42.2
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.2e-110 404.8 664 40.7
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.4e-103 381.3 675 39.0
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 9.3e-103 378.6 478 49.0
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 8.1e-99 365.5 643 40.0
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 3.4e-97 360.1 663 38.5
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 2.0e-89 334.3 492 44.1
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 7.9e-86 322.4 417 48.7
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.3e-85 320.9 455 47.0
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 6.7e-85 319.3 503 43.7
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.2e-78 298.5 836 32.1
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.5e-73 281.6 215 67.9
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 1.2e-62 245.4 165 77.6
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 9.4e-55 219.2 215 57.2
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 4.7e-54 216.9 296 48.6
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.0e-53 213.8 150 76.0
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 1.3e-51 208.8 745 29.7
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 4.8e-51 206.8 153 71.2
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 2.2e-48 198.0 324 44.1
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 1.2e-46 192.2 804 27.2
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 6.1e-46 189.9 221 50.2
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 3.4e-44 184.1 269 47.6
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 9.2e-34 149.4 188 48.9
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 2.0e-28 131.7 187 43.3
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 2.2e-27 128.3 101 65.3
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 5.0e-24 117.1 309 32.0
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 1.6e-22 112.1 78 73.1
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 7.5e-20 103.2 91 67.0
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.9e-18 98.6 91 63.7
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.1e-17 95.1 90 65.6
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 6.2e-14 83.6 56 67.9
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 6.4e-11 73.6 46 80.4
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 6.6e-08 63.5 86 41.9
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.9e-07 62.0 47 68.1
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 7.3e-07 60.1 41 75.6
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.6e-06 58.9 98 36.7


User provided reference genes

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