Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 0.0e+00 1372.5 1045 100.0
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 1.3e-202 711.1 1105 58.7
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 8.4e-186 655.2 1018 66.1
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 9.0e-164 582.0 1091 57.7
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 1.6e-157 561.2 1055 56.4
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 6.9e-156 555.8 1088 57.1
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 1.6e-152 544.7 1092 57.9
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 3.5e-152 543.5 1088 52.0
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 2.6e-147 527.3 1135 54.9
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 1.1e-145 521.9 1097 60.9
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 4.6e-144 516.5 1104 51.4
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 1.0e-143 515.4 1119 48.5
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 2.2e-141 507.7 1089 53.4
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 6.9e-140 502.7 1102 54.9
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 1.5e-139 501.5 1094 55.9
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 4.5e-139 500.0 1082 55.5
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 5.9e-139 499.6 1158 47.3
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 4.2e-137 493.4 1088 53.1
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 9.4e-137 492.3 1094 59.0
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 2.1e-136 491.1 1106 59.7
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 1.4e-135 488.4 1093 50.3
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 1.8e-135 488.0 1094 59.1
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 2.6e-134 484.2 1087 54.3
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 9.7e-134 482.3 1086 58.2
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 9.7e-134 482.3 1094 58.9
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 1.7e-133 481.5 1100 50.0
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.7e-133 481.5 1037 56.1
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 2.8e-133 480.7 1095 57.4
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 9.1e-132 475.7 1085 55.1
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 2.0e-131 474.6 1102 54.7
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 7.7e-131 472.6 974 62.1
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 1.0e-130 472.2 1157 47.6
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 5.0e-130 469.9 1095 51.7
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 1.9e-129 468.0 1134 42.9
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 3.6e-128 463.8 1091 48.9
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 6.1e-128 463.0 1065 53.2
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 8.0e-128 462.6 1080 51.8
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 9.7e-126 455.7 1092 58.1
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 3.7e-125 453.8 1094 58.2
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 6.3e-125 453.0 1087 54.5
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 1.8e-124 451.4 1087 56.8
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.6e-123 447.6 1069 54.3
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 3.5e-123 447.2 1158 54.7
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 4.5e-123 446.8 1069 53.3
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 1.3e-122 445.3 1087 54.8
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 6.5e-122 443.0 1078 55.8
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 6.5e-122 443.0 1094 53.7
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 7.2e-121 439.5 1190 53.4
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 7.2e-121 439.5 1121 52.5
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 4.7e-120 436.8 1068 58.4
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 6.1e-120 436.4 1071 53.3
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 8.0e-120 436.0 1076 54.5
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 9.8e-118 429.1 1109 55.2
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 1.3e-117 428.7 1118 52.0
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 1.3e-117 428.7 1114 56.6
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.7e-117 428.3 1069 57.2
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 6.3e-117 426.4 1077 48.6
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.8e-116 424.9 1069 57.2
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 3.1e-116 424.1 1129 55.7
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 7.7e-115 419.5 1125 55.7
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 1.6e-112 411.8 1114 55.3
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 1.6e-112 411.8 1079 46.1
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 3.7e-109 400.6 1116 51.0
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 2.4e-108 397.9 1109 55.4
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 3.5e-107 394.0 1103 55.3
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 5.9e-107 393.3 700 74.6
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 1.7e-106 391.7 1094 53.0
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 2.9e-106 391.0 1134 50.2
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 1.9e-105 388.3 1086 54.7
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 2.1e-104 384.8 1087 54.4
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 6.3e-101 373.2 1083 50.0
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 1.1e-100 372.5 1159 47.6
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 2.4e-100 371.3 1160 47.8
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 7.0e-100 369.8 1098 50.7
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 9.2e-100 369.4 853 65.2
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 9.2e-100 369.4 1063 56.0
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 5.0e-98 363.6 1096 50.1
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 7.3e-97 359.8 749 69.6
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 4.7e-96 357.1 1085 49.9
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 6.1e-96 356.7 1114 52.6
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 6.1e-96 356.7 1144 51.6
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 3.1e-95 354.4 657 54.6
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 1.7e-93 348.6 1009 45.6
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 2.2e-93 348.2 1159 50.8
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 7.8e-91 339.7 1158 50.6
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 5.0e-90 337.0 861 61.8
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 1.9e-89 335.1 853 55.6
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 1.9e-89 335.1 1147 50.7
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 1.9e-89 335.1 1088 48.0
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 2.0e-86 325.1 982 58.1
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 3.4e-86 324.3 910 44.6
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 4.4e-86 323.9 868 50.8
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 2.9e-85 321.2 234 70.1
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 4.9e-77 293.9 1114 45.8
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 2.5e-73 281.6 745 56.0
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 3.3e-65 254.6 932 49.1
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 8.4e-61 240.0 234 52.6
TWI75G0933 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 5.1e-58 230.7 278 48.6
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 3.6e-56 224.6 558 33.7
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 2.0e-46 192.2 657 45.1
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 2.5e-44 185.3 124 76.6
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 3.5e-43 181.4 126 71.4
ATR0913G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 3.2e-36 158.3 167 50.3
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 6.7e-34 150.6 128 62.5
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 3.1e-31 141.7 235 40.4
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 4.1e-31 141.4 832 44.7
CDE09G0259 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 5.3e-31 141.0 104 61.5
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 5.3e-31 141.0 235 37.0
Zm00001eb027100 Zea mays HOM05D005996 ORTHO05D007507 5.3e-31 141.0 124 58.1
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 6.9e-31 140.6 230 40.0
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 1.3e-29 136.3 231 40.3
Hma1.2p1_0032F.1_g019730 Hydrangea macrophylla HOM05D005996 ORTHO05D007507 1.1e-28 133.3 72 88.9
MBI09_g44523_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.1e-28 133.3 112 58.9
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 5.5e-28 131.0 234 37.2
ATR0074G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 1.4e-26 126.3 106 59.4
CDE09G0530 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 3.0e-26 125.2 93 61.3
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 8.2e-24 117.1 234 37.6
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 1.8e-23 115.9 109 57.8
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 1.7e-21 109.4 136 43.4
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 6.5e-21 107.5 94 54.3
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 3.2e-20 105.1 266 32.0
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 4.5e-14 84.7 235 31.9
SEGI_00210 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 4.5e-06 58.2 66 57.6
MBI09_g46961_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 7.7e-06 57.4 39 69.2


User provided reference genes

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