Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C175T11 Lonicera japonica HOM05D000560 ORTHO05D234188 1.8e-66 255.8 128 100.0
Dinv14135 Davidia involucrata HOM05D000560 ORTHO05D000417 7.4e-20 100.9 138 50.0
Oeu015552.1 Olea europaea HOM05D000560 ORTHO05D000417 2.6e-17 92.4 136 47.1
Actinidia32027 Actinidia chinensis HOM05D000560 ORTHO05D000417 3.8e-16 88.6 137 44.5
Sed0024811 Sechium edule HOM05D000560 ORTHO05D000417 9.4e-15 84.0 125 44.0
Prupe.8G170400 Prunus persica HOM05D000560 ORTHO05D000417 9.8e-12 73.9 139 41.0
RcHm_v2.0_Chr5g0071021 Rosa chinensis HOM05D000560 ORTHO05D000417 2.8e-11 72.4 149 41.6
Aqoxy5G01081 Aquilegia oxysepala HOM05D000560 ORTHO05D000417 4.8e-11 71.6 139 38.1
CiPaw.05G086100 Carya illinoinensis HOM05D000560 ORTHO05D000417 6.3e-11 71.2 152 36.2
Nitab4.5_0001215g0020 Nicotiana tabacum HOM05D000560 ORTHO05D000417 6.3e-11 71.2 138 39.1
MD10G1129900 Malus domestica HOM05D000560 ORTHO05D000417 8.3e-11 70.9 138 44.2
CsaV3_6G012580 Cucumis sativus L. HOM05D000560 ORTHO05D000417 1.8e-10 69.7 141 39.7
MD05G1126700 Malus domestica HOM05D000560 ORTHO05D000417 4.1e-10 68.6 132 42.4
Nitab4.5_0002834g0010 Nicotiana tabacum HOM05D000560 ORTHO05D000417 9.1e-10 67.4 138 37.7
Ca_03287_v3 Cicer arietinum L. HOM05D000560 ORTHO05D000417 1.2e-09 67.0 122 37.7
MELO3C013665.2 Cucumis melo HOM05D000560 ORTHO05D000417 1.2e-09 67.0 141 38.3
Peaxi162Scf00042g01214 Petunia axillaris HOM05D000560 ORTHO05D000417 2.0e-09 66.2 131 38.9
PGSC0003DMG400018938 Solanum tuberosum HOM05D000560 ORTHO05D000417 7.7e-09 64.3 128 36.7
Haze_02087 Corylus avellana HOM05D000560 ORTHO05D000417 1.3e-08 63.5 145 35.2
FvH4_3g39430 Fragaria vesca HOM05D000560 ORTHO05D000417 1.3e-08 63.5 142 38.7
FAN11G2766 Fragaria x ananassa HOM05D000560 ORTHO05D000417 1.3e-08 63.5 142 38.7
Sopen10g025480 Solanum pennellii HOM05D000560 ORTHO05D000417 1.7e-08 63.2 133 36.8
Solyc10g055710.2 Solanum lycopersicum HOM05D000560 ORTHO05D000417 2.2e-08 62.8 133 36.8
Rhsim05G0052300 Rhododendron simsii HOM05D000560 ORTHO05D000417 2.9e-08 62.4 135 40.7
TAR112G0001 Trochodendron aralioides HOM05D000560 ORTHO05D000417 5.0e-08 61.6 145 36.6
Oeu029654.3 Olea europaea HOM05D000560 ORTHO05D000417 6.5e-08 61.2 106 41.5
ClCG02G011110 Citrullus lanatus HOM05D000560 ORTHO05D000417 8.5e-08 60.8 147 35.4
FAN21G1571 Fragaria x ananassa HOM05D000560 ORTHO05D000417 8.5e-08 60.8 145 37.9
RcHm_v2.0_Chr6g0279131 Rosa chinensis HOM05D000560 ORTHO05D000417 8.5e-08 60.8 142 38.0
QL11p052576 Quercus lobata HOM05D000560 ORTHO05D000417 3.2e-07 58.9 149 36.9
GSVIVG01023963001 Vitis vinifera HOM05D000560 ORTHO05D000417 4.2e-07 58.5 49 59.2
CANSAT64G2126 Cannabis sativa HOM05D000560 ORTHO05D000417 5.5e-07 58.2 162 37.0
Medtr1g113850 Medicago truncatula HOM05D000560 ORTHO05D000417 7.2e-07 57.8 122 34.4
Hma1.2p1_0163F.1_g072780 Hydrangea macrophylla HOM05D000560 ORTHO05D000417 9.4e-07 57.4 86 43.0
TAR376G0554 Trochodendron aralioides HOM05D000560 ORTHO05D000417 1.6e-06 56.6 140 32.1
SGA_v2.0_scaffold32G13316 Striga asiatica HOM05D000560 ORTHO05D000417 4.7e-06 55.1 100 41.0


User provided reference genes

Program Settings