Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 5.5e-96 354.4 188 100.0
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 1.3e-60 236.9 204 67.2
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 8.3e-60 234.2 206 68.0
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 1.1e-59 233.8 205 68.8
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 4.1e-59 231.9 205 67.3
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 2.0e-58 229.6 193 69.9
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 5.9e-58 228.0 205 65.4
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 7.8e-58 227.6 206 65.5
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 8.6e-57 224.2 221 62.9
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 1.1e-56 223.8 203 65.5
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 1.2e-55 220.3 201 65.7
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 1.6e-55 219.9 211 62.1
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 1.6e-55 219.9 208 64.9
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 2.8e-55 219.2 201 64.7
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 2.8e-55 219.2 193 67.4
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 2.8e-55 219.2 204 61.8
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 4.7e-55 218.4 204 61.8
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 1.4e-54 216.9 215 60.5
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 1.4e-54 216.9 198 64.1
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 1.8e-54 216.5 208 61.5
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 3.0e-54 215.7 215 64.2
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 5.2e-54 214.9 208 64.9
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 2.0e-53 213.0 207 60.9
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 4.4e-53 211.8 215 60.9
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 7.5e-53 211.1 201 64.2
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 1.7e-52 209.9 212 66.0
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 8.3e-52 207.6 206 60.7
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 1.4e-51 206.8 222 58.1
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 2.4e-51 206.1 223 57.8
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 5.4e-51 204.9 203 62.6
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 7.0e-51 204.5 219 58.9
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 9.2e-51 204.1 190 64.7
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 1.2e-50 203.8 206 60.2
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 1.2e-50 203.8 209 59.8
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 1.6e-50 203.4 207 61.4
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 2.0e-50 203.0 229 56.3
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 5.9e-50 201.4 188 63.8
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 1.0e-49 200.7 214 59.8
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.0e-49 200.7 193 60.6
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 3.9e-49 198.7 219 58.0
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 8.6e-49 197.6 213 57.7
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.9e-48 196.4 193 61.1
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 3.3e-48 195.7 218 56.9
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 4.3e-48 195.3 212 59.0
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 4.3e-48 195.3 207 59.9
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 7.3e-48 194.5 245 54.3
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 9.5e-48 194.1 137 78.1
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.1e-47 193.0 201 60.2
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 2.1e-47 193.0 153 71.2
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 2.8e-47 192.6 174 66.1
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 6.2e-47 191.4 206 57.8
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 6.2e-47 191.4 215 55.8
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 2.3e-46 189.5 155 69.7
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 4.0e-46 188.7 229 55.9
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 5.2e-46 188.3 219 57.1
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 6.8e-46 188.0 209 56.0
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 3.4e-45 185.7 99 93.9
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 9.8e-45 184.1 95 96.8
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 9.8e-45 184.1 95 96.8
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 1.3e-44 183.7 258 49.2
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 1.3e-44 183.7 95 95.8
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 1.7e-44 183.3 96 95.8
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 2.2e-44 183.0 273 48.0
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 2.2e-44 183.0 222 55.0
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 2.2e-44 183.0 100 94.0
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 2.2e-44 183.0 95 95.8
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 4.9e-44 181.8 95 95.8
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 1.1e-43 180.6 95 94.7
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 3.2e-43 179.1 219 51.6
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 5.4e-43 178.3 96 95.8
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 7.0e-43 177.9 105 88.6
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 7.0e-43 177.9 193 56.5
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 6.0e-42 174.9 202 55.0
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 1.3e-41 173.7 125 75.2
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 5.0e-41 171.8 96 89.6
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 8.6e-41 171.0 188 55.9
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 2.5e-40 169.5 271 46.5
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 7.3e-40 167.9 98 92.9
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 2.1e-39 166.4 203 53.2
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 8.1e-39 164.5 171 63.2
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 5.8e-37 158.3 203 52.2
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 9.9e-37 157.5 165 62.4
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 6.4e-36 154.8 193 50.8
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 1.2e-34 150.6 212 50.9
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 2.7e-34 149.4 165 59.4
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 2.3e-33 146.4 175 57.7
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 3.0e-33 146.0 158 60.1
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 5.6e-32 141.7 296 41.9
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 1.2e-31 140.6 166 57.2
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 1.4e-30 137.1 107 72.9
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 3.1e-30 136.0 203 48.3
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 9.9e-29 131.0 170 52.9
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 1.3e-28 130.6 161 54.7
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 1.3e-28 130.6 161 53.4
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 8.4e-28 127.9 179 52.0
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 1.1e-27 127.5 105 70.5
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 2.4e-27 126.3 143 58.7
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 7.1e-27 124.8 123 54.5
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 9.2e-27 124.4 222 42.8
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 1.2e-26 124.0 167 53.3
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 2.3e-25 119.8 139 58.3
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 6.6e-25 118.2 179 44.7
MD06G1000100 Malus domestica HOM05D005752 ORTHO05D006959 1.2e-23 114.0 63 88.9
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 2.8e-23 112.8 196 40.3
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 4.7e-23 112.1 267 37.1
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 2.0e-21 106.7 273 35.5
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 5.8e-21 105.1 55 94.5
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 2.9e-20 102.8 194 42.8
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 7.3e-16 88.2 246 34.6
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 2.8e-15 86.3 181 43.1
C06p47550 Brassica napus HOM05D005752 ORTHO05D006959 6.2e-15 85.1 145 44.8
BolC6t39793H Brassica oleracea HOM05D005752 ORTHO05D006959 6.2e-15 85.1 145 44.8
Solyc06g150131.1 Solanum lycopersicum HOM05D005752 ORTHO05D006959 1.2e-13 80.9 167 40.7
GSVIVG01024241001 Vitis vinifera HOM05D005752 ORTHO05D006959 2.0e-13 80.1 40 95.0
AL2G33130 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 2.4e-11 73.2 41 87.8
vmacro17785 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 1.2e-10 70.9 45 82.2
BcaC08g46759 Brassica carinata HOM05D005752 ORTHO05D006959 4.6e-10 68.9 275 31.3
SGA_v2.0_scaffold21G09651 Striga asiatica HOM05D005752 ORTHO05D006959 7.9e-10 68.2 40 82.5
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 8.7e-09 64.7 190 33.2
Psat1g118960 Pisum sativum HOM05D005752 ORTHO05D006959 2.5e-08 63.2 151 41.1
PGSC0003DMG400035697 Solanum tuberosum HOM05D005752 ORTHO05D006959 7.4e-08 61.6 35 88.6
Peaxi162Scf00171g00037 Petunia axillaris HOM05D005752 ORTHO05D006959 1.6e-07 60.5 82 46.3
vmacro17760 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 1.6e-07 60.5 85 51.8
CsaV3_1G005260 Cucumis sativus L. HOM05D005752 ORTHO05D006959 4.8e-07 58.9 86 48.8
SGA_v2.0_scaffold25G10718 Striga asiatica HOM05D005752 ORTHO05D006959 4.8e-07 58.9 89 46.1
Cc00_g01560 Coffea canephora HOM05D005752 ORTHO05D006959 4.0e-06 55.8 85 45.9


User provided reference genes

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