Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 2.9e-148 528.5 255 100.0
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 3.0e-137 491.9 255 94.1
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 1.6e-135 486.1 250 94.8
Lj5A576T32 Lonicera japonica HOM05D006625 ORTHO05D008060 7.6e-133 477.2 254 92.9
Lj5A11T18 Lonicera japonica HOM05D006625 ORTHO05D008060 5.5e-123 444.5 237 92.0
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 1.4e-89 333.6 241 68.0
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 6.3e-87 324.7 241 66.4
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 3.5e-85 318.9 238 67.6
Lj5A1T18 Lonicera japonica HOM05D006625 ORTHO05D008060 5.0e-84 315.1 254 66.1
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 1.1e-83 313.9 240 65.0
Lj5A1T20 Lonicera japonica HOM05D006625 ORTHO05D008060 7.2e-83 311.2 254 66.5
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 4.7e-82 308.5 242 63.2
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 1.8e-81 306.6 241 63.1
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 3.0e-81 305.8 242 62.8
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 3.0e-81 305.8 241 62.2
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 2.0e-80 303.1 241 60.6
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 4.4e-80 302.0 241 61.8
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 5.7e-80 301.6 242 63.2
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 1.7e-79 300.1 241 61.4
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 2.2e-79 299.7 251 59.0
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 6.3e-79 298.1 241 62.2
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 1.4e-78 297.0 242 62.0
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 5.4e-78 295.0 239 60.7
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 7.0e-78 294.7 251 60.6
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 1.2e-77 293.9 244 59.8
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 5.9e-77 291.6 242 60.3
Potri.005G035600 Populus trichocarpa HOM05D006625 ORTHO05D008060 1.7e-76 290.0 238 59.7
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 2.3e-76 289.7 242 60.3
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 6.6e-76 288.1 242 59.1
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 8.6e-76 287.7 240 58.8
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 1.1e-75 287.3 240 60.4
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 1.1e-75 287.3 235 57.9
Lsat_1_v5_gn_2_64300 Lactuca sativa HOM05D006625 ORTHO05D008060 1.9e-75 286.6 242 59.9
FvH4_6g05630 Fragaria vesca HOM05D006625 ORTHO05D008060 2.5e-75 286.2 241 61.0
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 2.5e-75 286.2 243 60.9
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 2.5e-75 286.2 239 58.6
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 5.5e-75 285.0 245 58.8
FAN14G5181 Fragaria x ananassa HOM05D001310 ORTHO05D008060 5.5e-75 285.0 234 61.5
FAN14G5649 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.1e-74 283.1 234 61.1
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.8e-74 282.7 234 61.1
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 3.6e-74 282.3 241 58.5
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 3.6e-74 282.3 240 61.2
FAN09G2049 Fragaria x ananassa HOM05D001310 ORTHO05D008060 4.7e-74 282.0 234 60.7
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 6.1e-74 281.6 242 58.7
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 1.0e-73 280.8 241 60.2
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 3.0e-73 279.3 245 56.7
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 3.0e-73 279.3 256 52.3
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 6.8e-73 278.1 242 57.0
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 6.8e-73 278.1 242 55.8
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 1.2e-72 277.3 252 54.0
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 2.6e-72 276.2 243 56.4
TAR362G1087 Trochodendron aralioides HOM05D006625 ORTHO05D008060 2.6e-72 276.2 241 58.5
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 4.4e-72 275.4 242 56.6
THA.LOC104821879 Tarenaya hassleriana HOM05D006625 ORTHO05D008060 4.9e-71 271.9 236 53.4
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 6.3e-71 271.6 250 56.0
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 6.3e-71 271.6 243 57.2
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 1.1e-70 270.8 245 56.7
Aa31LG5G15780 Aethionema arabicum HOM05D006625 ORTHO05D008060 1.4e-70 270.4 238 53.4
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 7.0e-70 268.1 243 55.1
Lalb_Chr21g0310751 Lupinus albus HOM05D006625 ORTHO05D008060 7.0e-70 268.1 242 55.8
Gohir.A11G000800 Gossypium hirsutum HOM05D006625 ORTHO05D008060 1.2e-69 267.3 244 53.7
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 1.6e-69 266.9 242 55.4
VMungo0720G0027 Vigna mungo HOM05D006625 ORTHO05D008060 1.6e-69 266.9 245 55.1
MD04G1207100 Malus domestica HOM05D006625 ORTHO05D008060 3.5e-69 265.8 240 58.3
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 1.0e-68 264.2 241 54.8
Eucgr.H04479 Eucalyptus grandis HOM05D006625 ORTHO05D008060 8.6e-68 261.2 241 53.1
Thhalv10021312m.g Eutrema salsugineum HOM05D006625 ORTHO05D008060 1.1e-67 260.8 239 52.3
Gorai.007G001300 Gossypium raimondii HOM05D006625 ORTHO05D008060 1.1e-67 260.8 243 52.7
AL3G15690 Arabidopsis lyrata HOM05D006625 ORTHO05D008060 1.9e-67 260.0 240 53.8
Gohir.D11G000400 Gossypium hirsutum HOM05D006625 ORTHO05D008060 1.9e-67 260.0 243 52.7
TWI56G0867 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 3.3e-67 259.2 240 54.6
COL.COLO4_13497 Corchorus olitorius HOM05D006625 ORTHO05D008060 7.3e-67 258.1 239 53.1
Sp3g04100 Schrenkiella parvula HOM05D006625 ORTHO05D008060 2.1e-66 256.5 238 50.8
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 2.8e-66 256.1 235 52.8
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 8.0e-66 254.6 262 53.4
Migut.N01952 Erythranthe guttata HOM05D006625 ORTHO05D008060 8.0e-66 254.6 240 52.1
C05p61940 Brassica napus HOM05D006625 ORTHO05D008060 1.0e-65 254.2 238 50.8
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 5.2e-65 251.9 241 52.3
EL10Ac4g09338 Beta vulgaris HOM05D006625 ORTHO05D008060 6.8e-65 251.5 245 51.4
ClCG02G015910 Citrullus lanatus HOM05D006625 ORTHO05D008060 6.8e-65 251.5 242 53.3
BraA05t23018Z Brassica rapa HOM05D006625 ORTHO05D008060 8.9e-65 251.1 239 51.0
A05p42330 Brassica napus HOM05D006625 ORTHO05D008060 1.2e-64 250.8 239 51.0
Carub.0003s0450 Capsella rubella HOM05D006625 ORTHO05D008060 1.2e-64 250.8 240 52.1
Lj5A11T17 Lonicera japonica HOM05D006625 ORTHO05D008060 2.0e-64 250.0 128 95.3
PGR031G0551 Punica granatum HOM05D006625 ORTHO05D008060 2.0e-64 250.0 241 51.9
BolC5t34854H Brassica oleracea HOM05D006625 ORTHO05D008060 5.8e-64 248.4 238 50.0
Nn4g26222 Nelumbo nucifera HOM05D006625 ORTHO05D008060 5.8e-64 248.4 241 51.0
BcaC05g30013 Brassica carinata HOM05D006625 ORTHO05D008060 9.8e-64 247.7 239 52.3
Phvul.007G181000 Phaseolus vulgaris HOM05D006625 ORTHO05D008060 2.2e-63 246.5 243 52.7
Aqoxy2G03295 Aquilegia oxysepala HOM05D006625 ORTHO05D008060 1.4e-62 243.8 238 49.6
SGA_v2.0_scaffold81G26083 Striga asiatica HOM05D006625 ORTHO05D008060 1.6e-61 240.4 238 52.1
BcaC05g30142 Brassica carinata HOM05D006625 ORTHO05D008060 2.7e-61 239.6 240 51.2
PSO339G1258 Papaver somniferum HOM05D006625 ORTHO05D008060 6.0e-61 238.4 247 49.4
Sed0016985 Sechium edule HOM05D006625 ORTHO05D008060 2.3e-57 226.5 240 49.2
Lj5A10T21 Lonicera japonica HOM05D006625 ORTHO05D008060 2.9e-55 219.5 110 97.3
ATR0626G410 Amborella trichopoda HOM05D006625 ORTHO05D008060 4.9e-55 218.8 238 47.9
TWI77G0294 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 1.9e-54 216.9 198 56.6
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 3.0e-52 209.5 244 49.2
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 7.3e-51 204.9 183 57.9
CARHR079590 Cardamine hirsuta HOM05D006625 ORTHO05D008060 2.8e-50 203.0 210 48.6
Lj5A18T33 Lonicera japonica HOM05D006625 ORTHO05D008060 3.6e-50 202.6 110 90.9
AT3G05250 Arabidopsis thaliana HOM05D006625 ORTHO05D008060 6.2e-50 201.8 210 48.6
PSO801G0350 Papaver somniferum HOM05D000048 ORTHO05D000207 8.1e-50 201.4 177 52.5
Zm00001eb212380 Zea mays HOM05D006625 ORTHO05D008060 3.4e-48 196.1 240 43.3
CDE11G1261 Ceratophyllum demersum HOM05D006625 ORTHO05D008060 9.2e-46 188.0 227 42.3
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 5.6e-43 178.7 236 39.0
MELO3C004279.2 Cucumis melo HOM05D006625 ORTHO05D008060 8.9e-41 171.4 133 57.9
QL03p006436 Quercus lobata HOM05D006625 ORTHO05D008060 7.6e-40 168.3 124 60.5
AUR62000843 Chenopodium quinoa HOM05D006625 ORTHO05D008060 1.3e-36 157.5 180 48.3
MD12G1221000 Malus domestica HOM05D006625 ORTHO05D008060 5.3e-33 145.6 144 56.2
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 3.4e-32 142.9 197 37.1
MBI19_g05826_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 3.8e-31 139.4 102 63.7
COL.COLO4_10909 Corchorus olitorius HOM05D006625 ORTHO05D008060 5.4e-30 135.6 215 38.1
Hma1.2p1_0617F.1_g190240 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 3.9e-28 129.4 114 60.5
Os03g0809800 Oryza sativa ssp. japonica HOM05D006625 ORTHO05D008060 3.6e-26 122.9 137 46.7
BolC3t17028H Brassica oleracea HOM05D006625 ORTHO05D008060 1.4e-25 120.9 197 35.0
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 2.4e-25 120.2 251 32.7
AagrBONN_evm.TU.Sc2ySwM_362.2578 Anthoceros agrestis HOM05D006625 ORTHO05D008060 1.4e-22 110.9 248 31.9
FAN05G4155 Fragaria x ananassa HOM05D001310 ORTHO05D001283 7.1e-22 108.6 122 50.8
Pp3c3_27350 Physcomitrium patens HOM05D006625 ORTHO05D008060 1.1e-19 101.3 219 29.7
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 4.5e-16 89.4 53 71.7
MD12G1221200 Malus domestica HOM05D006625 ORTHO05D008060 5.8e-16 89.0 55 72.7
MBI19_g05827_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 2.3e-12 77.0 139 37.4
HPP92_025561 Vanilla planifolia HOM05D006625 ORTHO05D008060 1.5e-11 74.3 69 52.2
CBR_g7977 Chara braunii HOM05D006625 ORTHO05D008060 5.8e-08 62.4 102 31.4
CSS0021359 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 1.9e-06 57.4 97 40.2


User provided reference genes

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