Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 1.3e-72 276.2 132 100.0
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 3.1e-61 238.4 145 83.4
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 4.0e-61 238.0 145 84.1
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 9.0e-61 236.9 144 83.3
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 1.2e-60 236.5 145 81.4
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 2.0e-60 235.7 145 82.8
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 2.6e-60 235.3 145 82.8
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.6e-60 235.3 145 82.1
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.4e-60 235.0 144 83.3
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 3.4e-60 235.0 145 82.8
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 4.5e-60 234.6 145 82.8
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 4.5e-60 234.6 146 81.5
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 5.8e-60 234.2 145 82.8
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 5.8e-60 234.2 144 81.9
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 7.6e-60 233.8 145 81.4
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 7.6e-60 233.8 145 82.1
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 9.9e-60 233.4 144 81.2
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 9.9e-60 233.4 144 81.2
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 1.3e-59 233.0 145 82.1
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 1.3e-59 233.0 145 82.1
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 1.7e-59 232.6 145 81.4
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 1.7e-59 232.6 145 80.7
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.7e-59 232.6 145 82.1
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.7e-59 232.6 145 80.7
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.7e-59 232.6 145 81.4
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 2.2e-59 232.3 144 80.6
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 2.2e-59 232.3 145 80.7
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.2e-59 232.3 145 81.4
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 2.2e-59 232.3 145 80.7
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 2.2e-59 232.3 145 80.7
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 2.9e-59 231.9 145 80.7
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 3.8e-59 231.5 145 80.7
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 3.8e-59 231.5 145 81.4
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 4.9e-59 231.1 145 81.4
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 4.9e-59 231.1 145 80.0
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 4.9e-59 231.1 145 81.4
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 4.9e-59 231.1 145 80.0
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 8.4e-59 230.3 145 80.0
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 8.4e-59 230.3 147 77.6
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.1e-58 229.9 145 80.0
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.1e-58 229.9 145 79.3
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.1e-58 229.9 147 77.6
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.4e-58 229.6 145 79.3
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.4e-58 229.6 144 79.9
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 2.4e-58 228.8 145 77.9
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.4e-58 228.8 147 79.6
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 2.4e-58 228.8 145 79.3
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 3.2e-58 228.4 145 78.6
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 3.2e-58 228.4 145 78.6
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 3.2e-58 228.4 144 79.2
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 3.2e-58 228.4 145 78.6
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.2e-58 228.4 145 80.0
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 3.2e-58 228.4 145 78.6
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 3.2e-58 228.4 145 78.6
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 3.2e-58 228.4 145 78.6
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 4.2e-58 228.0 145 77.9
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 4.2e-58 228.0 145 77.9
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 4.2e-58 228.0 145 77.9
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 4.2e-58 228.0 145 77.9
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 4.2e-58 228.0 144 78.5
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 5.4e-58 227.6 145 77.9
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 5.4e-58 227.6 145 77.9
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.4e-58 227.6 145 80.0
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.4e-58 227.6 145 80.0
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 5.4e-58 227.6 143 77.6
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 7.1e-58 227.3 145 78.6
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 7.1e-58 227.3 145 79.3
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 7.1e-58 227.3 145 78.6
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 7.1e-58 227.3 145 79.3
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 9.3e-58 226.9 145 79.3
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.2e-57 226.5 146 78.1
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.2e-57 226.5 145 77.9
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 1.2e-57 226.5 145 77.9
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 1.2e-57 226.5 144 77.8
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 1.2e-57 226.5 145 78.6
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 1.6e-57 226.1 144 78.5
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.6e-57 226.1 144 78.5
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 2.7e-57 225.3 145 79.3
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 3.5e-57 224.9 145 77.2
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 3.5e-57 224.9 145 78.6
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 3.5e-57 224.9 145 78.6
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 3.5e-57 224.9 145 80.0
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 6.0e-57 224.2 154 75.3
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 5.1e-56 221.1 171 70.2
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 6.7e-56 220.7 145 77.2
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 2.5e-55 218.8 150 76.0
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 2.1e-54 215.7 180 66.1
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 4.8e-54 214.5 145 76.6
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 6.2e-54 214.2 143 74.1
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.4e-53 213.0 136 81.6
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.2e-52 209.9 134 78.4
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 7.6e-52 207.2 151 66.2
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 4.9e-51 204.5 144 70.1
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 3.2e-50 201.8 143 73.4
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.6e-49 199.5 151 66.9
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 8.7e-48 193.7 166 63.9
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.1e-47 193.4 112 83.9
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 8.2e-46 187.2 145 69.7
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 2.4e-45 185.7 145 69.7
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 4.0e-45 184.9 126 75.4
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 6.9e-45 184.1 111 80.2
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.8e-43 178.3 142 66.9
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 8.4e-43 177.2 146 57.5
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 4.3e-39 164.9 122 61.5
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 1.1e-37 160.2 131 67.9
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 3.1e-37 158.7 110 74.5
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 6.9e-37 157.5 107 75.7
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 2.6e-36 155.6 268 42.2
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.0e-35 153.7 92 81.5
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 5.0e-35 151.4 92 79.3
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 1.2e-33 146.7 143 58.7
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.0e-32 143.7 163 47.2
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 7.4e-31 137.5 139 48.9
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 7.2e-26 120.9 119 53.8
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 8.2e-22 107.5 75 68.0
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 7.7e-20 100.9 128 47.7
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 3.8e-19 98.6 47 93.6
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 6.7e-16 87.8 53 86.8
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.7e-15 84.7 63 63.5
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 4.5e-12 75.1 38 86.8
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 9.7e-07 57.4 26 92.3


User provided reference genes

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