Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 2.4e-100 369.0 210 100.0
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 4.3e-57 225.3 211 68.2
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 1.9e-52 209.9 211 58.3
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.7e-51 206.1 210 53.8
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 6.0e-51 204.9 204 58.3
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 1.0e-50 204.1 204 57.8
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 8.7e-50 201.1 202 57.9
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.9e-49 199.9 201 60.2
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 9.6e-49 197.6 211 61.1
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 1.3e-48 197.2 209 56.9
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.6e-48 196.8 212 55.7
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.6e-48 196.8 214 57.5
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.8e-48 196.1 205 56.1
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 6.9e-47 191.4 212 55.7
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 1.2e-46 190.7 209 60.3
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 1.5e-46 190.3 209 55.0
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 3.4e-46 189.1 204 53.4
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.7e-45 186.8 212 57.1
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 2.9e-45 186.0 213 54.9
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 2.9e-45 186.0 202 55.9
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.8e-45 185.7 211 61.1
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.8e-45 185.7 211 61.1
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 3.8e-45 185.7 210 54.8
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 6.4e-45 184.9 202 60.4
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 8.4e-45 184.5 210 54.3
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 8.4e-45 184.5 220 53.6
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 1.1e-44 184.1 213 52.1
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 4.2e-44 182.2 200 53.5
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 5.4e-44 181.8 200 53.5
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 5.4e-44 181.8 230 53.0
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 1.2e-43 180.6 219 53.9
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.6e-43 180.3 213 52.1
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.5e-43 179.1 216 49.5
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 6.0e-43 178.3 216 53.2
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 1.3e-42 177.2 237 48.9
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 1.3e-42 177.2 225 50.7
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 1.3e-42 177.2 216 50.5
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 1.8e-42 176.8 219 50.7
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 1.8e-42 176.8 220 56.4
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 1.8e-42 176.8 220 56.4
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 3.0e-42 176.0 216 50.0
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 3.9e-42 175.6 213 49.3
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 3.9e-42 175.6 211 50.2
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 5.1e-42 175.3 211 55.0
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 8.7e-42 174.5 211 50.7
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 8.7e-42 174.5 209 49.8
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.9e-41 173.3 213 48.4
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 7.4e-41 171.4 210 48.1
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 9.6e-41 171.0 215 52.1
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 9.6e-41 171.0 230 50.4
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 1.3e-40 170.6 215 49.8
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 1.3e-40 170.6 200 49.0
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 2.1e-40 169.9 212 53.3
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 1.1e-39 167.5 206 51.5
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.1e-39 167.5 218 58.3
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.4e-39 167.2 210 47.6
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 1.8e-39 166.8 216 54.2
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.8e-39 166.8 209 49.8
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 3.1e-39 166.0 208 54.8
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 9.0e-39 164.5 212 47.2
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 9.0e-39 164.5 211 58.3
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 1.2e-38 164.1 209 47.4
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 1.2e-38 164.1 224 51.3
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 1.5e-38 163.7 212 48.1
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 1.5e-38 163.7 244 45.5
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 2.6e-38 162.9 207 48.8
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 2.6e-38 162.9 220 48.2
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 3.4e-38 162.5 201 52.7
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 4.5e-38 162.2 239 47.7
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 5.8e-38 161.8 217 47.5
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.6e-38 161.4 210 45.7
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 1.0e-37 161.0 204 49.5
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 1.7e-37 160.2 200 49.0
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 2.9e-37 159.5 205 48.8
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 3.8e-37 159.1 218 46.8
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 4.9e-37 158.7 200 49.0
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 4.9e-37 158.7 200 49.0
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 8.4e-37 157.9 233 44.6
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 8.4e-37 157.9 207 46.9
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 1.4e-36 157.1 211 46.4
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 1.9e-36 156.8 211 46.4
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 2.5e-36 156.4 211 46.9
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 2.5e-36 156.4 210 55.7
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 4.2e-36 155.6 224 51.3
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 4.2e-36 155.6 210 47.1
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 4.2e-36 155.6 214 50.5
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 5.5e-36 155.2 237 44.7
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 9.3e-36 154.5 202 47.0
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 9.3e-36 154.5 217 55.3
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 1.6e-35 153.7 207 45.9
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.6e-35 153.7 200 48.5
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 1.6e-35 153.7 208 51.9
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 2.7e-35 152.9 230 53.0
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 3.5e-35 152.5 210 54.8
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 6.0e-35 151.8 213 45.1
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 1.0e-34 151.0 210 43.8
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 1.3e-34 150.6 204 54.4
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 3.0e-34 149.4 230 52.6
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 3.0e-34 149.4 199 50.8
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 1.1e-33 147.5 203 54.7
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.5e-33 147.1 204 55.9
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 2.5e-33 146.4 202 45.0
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 4.3e-33 145.6 212 53.8
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 9.6e-33 144.4 213 44.1
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 2.8e-32 142.9 213 44.1
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 8.2e-32 141.4 169 52.7
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 2.6e-30 136.3 205 43.4
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 5.8e-30 135.2 214 47.7
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.3e-29 134.0 122 63.9
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 2.2e-29 133.3 127 61.4
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 2.9e-29 132.9 193 42.0
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 2.9e-29 132.9 205 43.4
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 8.4e-29 131.3 180 47.8
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 7.1e-28 128.3 173 45.7
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 2.7e-27 126.3 193 40.9
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 2.7e-27 126.3 193 40.9
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 1.1e-23 114.4 210 40.0
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 4.5e-22 109.0 185 42.2
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 1.0e-21 107.8 198 35.4
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.3e-21 107.5 177 40.7
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 5.0e-21 105.5 119 62.2
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 1.9e-20 103.6 195 35.9
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 1.6e-19 100.5 135 47.4
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 1.0e-18 97.8 203 33.5
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.1e-17 94.4 206 36.9
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 9.1e-15 84.7 191 32.5
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 3.8e-13 79.3 123 41.5
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 6.5e-13 78.6 68 57.4
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 8.5e-13 78.2 91 53.8
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 1.1e-12 77.8 194 31.4
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 1.1e-12 77.8 115 59.1
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 2.7e-11 73.2 191 42.4
Hund13632 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.3e-08 64.3 173 31.2
BcaB07g29688 Brassica carinata HOM05D005391 ORTHO05D006694 7.7e-06 55.1 34 70.6


User provided reference genes

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